RNA–Protein interactions for RNA: ENST00000462970.5

PSMD4-208, Transcript of proteasome 26S subunit, non-ATPase 4, human

TSL 5

Gene PSMD4, Length 900 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD4-208	ENST00000462970	CCND1	P24385	295 aa		9.2	□□□□□ -0.94
PSMD4-208	ENST00000462970	TYK2	P29597	1187 aa		9.2	□□□□□ -0.94
PSMD4-208	ENST00000462970	ARF3	P61204	181 aa	Predicted RBP	9.2	□□□□□ -0.94
PSMD4-208	ENST00000462970	ATP6V0D1	P61421	351 aa		9.2	□□□□□ -0.94
PSMD4-208	ENST00000462970	IRF9	Q00978	393 aa		9.2	□□□□□ -0.94
PSMD4-208	ENST00000462970	MEF2A	Q02078	507 aa	Predicted RBP	9.2	□□□□□ -0.94
PSMD4-208	ENST00000462970	GRM7	Q14831	915 aa		9.2	□□□□□ -0.94
PSMD4-208	ENST00000462970	OR4D1	Q15615	310 aa		9.2	□□□□□ -0.94
PSMD4-208	ENST00000462970	PPP1R3A	Q16821	1122 aa		9.2	□□□□□ -0.94
PSMD4-208	ENST00000462970	DEFB109B	Q30KR1	87 aa		9.2	□□□□□ -0.94
PSMD4-208	ENST00000462970	FBXO48	Q5FWF7	155 aa		9.2	□□□□□ -0.94
PSMD4-208	ENST00000462970	TCTE1	Q5JU00	501 aa		9.2	□□□□□ -0.94
PSMD4-208	ENST00000462970	TRMT10C	Q7L0Y3	403 aa	Known RBP	9.2	□□□□□ -0.94
PSMD4-208	ENST00000462970	LRRC56	Q8IYG6	542 aa	Predicted RBP	9.2	□□□□□ -0.94
PSMD4-208	ENST00000462970	DSEL	Q8IZU8	1212 aa		9.2	□□□□□ -0.94
PSMD4-208	ENST00000462970	CSNK1A1L	Q8N752	337 aa		9.2	□□□□□ -0.94
PSMD4-208	ENST00000462970	ENDOV	Q8N8Q3	282 aa	Known RBP	9.2	□□□□□ -0.94
PSMD4-208	ENST00000462970	SNX31	Q8N9S9	440 aa		9.2	□□□□□ -0.94
PSMD4-208	ENST00000462970	UBLCP1	Q8WVY7	318 aa	Predicted RBP	9.2	□□□□□ -0.94
PSMD4-208	ENST00000462970	SLC45A3	Q96JT2	553 aa		9.2	□□□□□ -0.94
PSMD4-208	ENST00000462970	CABS1	Q96KC9	395 aa		9.2	□□□□□ -0.94
PSMD4-208	ENST00000462970	SCYL1	Q96KG9	808 aa		9.2	□□□□□ -0.94
PSMD4-208	ENST00000462970	HAUS8	Q9BT25	410 aa		9.2	□□□□□ -0.94
PSMD4-208	ENST00000462970	YIPF2	Q9BWQ6	316 aa		9.2	□□□□□ -0.94
PSMD4-208	ENST00000462970	SGPP1	Q9BX95	441 aa		9.2	□□□□□ -0.94
PSMD4-208	ENST00000462970	CHRNA10	Q9GZZ6	450 aa		9.2	□□□□□ -0.94
PSMD4-208	ENST00000462970	ACTL8	Q9H568	366 aa		9.2	□□□□□ -0.94
PSMD4-208	ENST00000462970	NMRAL1	Q9HBL8	299 aa		9.2	□□□□□ -0.94
PSMD4-208	ENST00000462970	CUTC	Q9NTM9	273 aa		9.2	□□□□□ -0.94
PSMD4-208	ENST00000462970	IFT80	Q9P2H3	777 aa	Predicted RBP	9.2	□□□□□ -0.94
PSMD4-208	ENST00000462970	ANKMY1	Q9P2S6	941 aa		9.2	□□□□□ -0.94
PSMD4-208	ENST00000462970	KCND3	Q9UK17	655 aa		9.2	□□□□□ -0.94
PSMD4-208	ENST00000462970	NOVA2	Q9UNW9	492 aa	Known RBP	9.2	□□□□□ -0.94
PSMD4-208	ENST00000462970	ACOT9	Q9Y305	439 aa		9.2	□□□□□ -0.94
PSMD4-208	ENST00000462970	SCN2A	Q99250	2005 aa		9.2	□□□□□ -0.94
PSMD4-208	ENST00000462970	CACNA1G	O43497	2377 aa		9.2	□□□□□ -0.94
PSMD4-208	ENST00000462970		A0A087X1B8	175 aa		9.19	□□□□□ -0.94
PSMD4-208	ENST00000462970		A0A096LPK6	155 aa		9.19	□□□□□ -0.94
PSMD4-208	ENST00000462970		A0A1B0GX78	115 aa		9.19	□□□□□ -0.94
PSMD4-208	ENST00000462970	FEZF1	A0PJY2	475 aa		9.19	□□□□□ -0.94
PSMD4-208	ENST00000462970	HYKK	A2RU49	373 aa		9.19	□□□□□ -0.94
PSMD4-208	ENST00000462970	C21orf140	B9A014	251 aa		9.19	□□□□□ -0.94
PSMD4-208	ENST00000462970	TRIM49D1	C9J1S8	452 aa		9.19	□□□□□ -0.94
PSMD4-208	ENST00000462970	SRPX2	O60687	465 aa	Predicted RBP	9.19	□□□□□ -0.94
PSMD4-208	ENST00000462970	KRT38	O76015	456 aa		9.19	□□□□□ -0.94
PSMD4-208	ENST00000462970	SLU7	O95391	586 aa	Known RBP	9.19	□□□□□ -0.94
PSMD4-208	ENST00000462970	MYBL2	P10244	700 aa		9.19	□□□□□ -0.94
PSMD4-208	ENST00000462970	EZR	P15311	586 aa	Known RBP	9.19	□□□□□ -0.94
PSMD4-208	ENST00000462970	NPPB	P16860	134 aa		9.19	□□□□□ -0.94
PSMD4-208	ENST00000462970	RORA	P35398	523 aa		9.19	□□□□□ -0.94
PSMD4-208	ENST00000462970	GRK3	P35626	688 aa		9.19	□□□□□ -0.94
PSMD4-208	ENST00000462970	GDF5	P43026	501 aa		9.19	□□□□□ -0.94
PSMD4-208	ENST00000462970	GLRB	P48167	497 aa		9.19	□□□□□ -0.94
PSMD4-208	ENST00000462970	SERPINB9	P50453	376 aa		9.19	□□□□□ -0.94
PSMD4-208	ENST00000462970	CCR8	P51685	355 aa		9.19	□□□□□ -0.94
PSMD4-208	ENST00000462970	ARSF	P54793	590 aa		9.19	□□□□□ -0.94
PSMD4-208	ENST00000462970	DCD	P81605	110 aa	Known RBP	9.19	□□□□□ -0.94
PSMD4-208	ENST00000462970	NFKB2	Q00653	900 aa		9.19	□□□□□ -0.94
PSMD4-208	ENST00000462970	MC1R	Q01726	317 aa		9.19	□□□□□ -0.94
PSMD4-208	ENST00000462970	RHD	Q02161	417 aa		9.19	□□□□□ -0.94
PSMD4-208	ENST00000462970	CDC20	Q12834	499 aa		9.19	□□□□□ -0.94
PSMD4-208	ENST00000462970	DLG1	Q12959	904 aa		9.19	□□□□□ -0.94
PSMD4-208	ENST00000462970	ZKSCAN8	Q15776	578 aa	Predicted RBP	9.19	□□□□□ -0.94
PSMD4-208	ENST00000462970	HKDC1	Q2TB90	917 aa		9.19	□□□□□ -0.94
PSMD4-208	ENST00000462970	FAM214A	Q32MH5	1076 aa		9.19	□□□□□ -0.94
PSMD4-208	ENST00000462970	NKAIN1	Q4KMZ8	207 aa		9.19	□□□□□ -0.94
PSMD4-208	ENST00000462970	FAM69B	Q5VUD6	431 aa		9.19	□□□□□ -0.94
PSMD4-208	ENST00000462970	ZNF425	Q6IV72	752 aa		9.19	□□□□□ -0.94
PSMD4-208	ENST00000462970	RHBDD2	Q6NTF9	364 aa		9.19	□□□□□ -0.94
PSMD4-208	ENST00000462970	FBXO42	Q6P3S6	717 aa		9.19	□□□□□ -0.94
PSMD4-208	ENST00000462970	KLC3	Q6P597	504 aa		9.19	□□□□□ -0.94
PSMD4-208	ENST00000462970	LCTL	Q6UWM7	567 aa		9.19	□□□□□ -0.94
PSMD4-208	ENST00000462970	RNF44	Q7L0R7	432 aa		9.19	□□□□□ -0.94
PSMD4-208	ENST00000462970	THOC6	Q86W42	341 aa	Known RBP	9.19	□□□□□ -0.94
PSMD4-208	ENST00000462970	TBC1D19	Q8N5T2	526 aa		9.19	□□□□□ -0.94
PSMD4-208	ENST00000462970	OR56A3	Q8NH54	315 aa		9.19	□□□□□ -0.94
PSMD4-208	ENST00000462970	SLC44A1	Q8WWI5	657 aa		9.19	□□□□□ -0.94
PSMD4-208	ENST00000462970	ANKRD7	Q92527	254 aa		9.19	□□□□□ -0.94
PSMD4-208	ENST00000462970	EXTL1	Q92935	676 aa		9.19	□□□□□ -0.94
PSMD4-208	ENST00000462970	COL26A1	Q96A83	441 aa		9.19	□□□□□ -0.94
PSMD4-208	ENST00000462970	PTER	Q96BW5	349 aa		9.19	□□□□□ -0.94
PSMD4-208	ENST00000462970	NXNL1	Q96CM4	212 aa		9.19	□□□□□ -0.94
PSMD4-208	ENST00000462970	MACROD1	Q9BQ69	325 aa		9.19	□□□□□ -0.94
PSMD4-208	ENST00000462970	NLN	Q9BYT8	704 aa		9.19	□□□□□ -0.94
PSMD4-208	ENST00000462970	TMEM184C	Q9NVA4	438 aa		9.19	□□□□□ -0.94
PSMD4-208	ENST00000462970	FARSA	Q9Y285	508 aa	Known RBP	9.19	□□□□□ -0.94
PSMD4-208	ENST00000462970	MAU2	Q9Y6X3	613 aa		9.19	□□□□□ -0.94
PSMD4-208	ENST00000462970	ATM	Q13315	3056 aa		9.19	□□□□□ -0.94
PSMD4-208	ENST00000462970	SMIM23	A6NLE4	172 aa		9.18	□□□□□ -0.94
PSMD4-208	ENST00000462970	EIF4E1B	A6NMX2	242 aa	Known RBP	9.18	□□□□□ -0.94
PSMD4-208	ENST00000462970	UBXN8	O00124	270 aa		9.18	□□□□□ -0.94
PSMD4-208	ENST00000462970	CLGN	O14967	610 aa		9.18	□□□□□ -0.94
PSMD4-208	ENST00000462970	DSCR3	O14972	297 aa		9.18	□□□□□ -0.94
PSMD4-208	ENST00000462970	RIPK2	O43353	540 aa		9.18	□□□□□ -0.94
PSMD4-208	ENST00000462970	OR1F1	O43749	312 aa		9.18	□□□□□ -0.94
PSMD4-208	ENST00000462970	CCNT2	O60583	730 aa	Known RBP	9.18	□□□□□ -0.94
PSMD4-208	ENST00000462970	CREG1	O75629	220 aa		9.18	□□□□□ -0.94
PSMD4-208	ENST00000462970	WISP3	O95389	354 aa	Predicted RBP	9.18	□□□□□ -0.94
PSMD4-208	ENST00000462970	C2	P06681	752 aa		9.18	□□□□□ -0.94
PSMD4-208	ENST00000462970	HRH2	P25021	359 aa		9.18	□□□□□ -0.94

Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms