RNA–Protein interactions for RNA: ENST00000462236.1

COPS3-204, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-204ENST00000462236 TGFB1I1O43294 461 aa4.78□□□□□ -1.64
COPS3-204ENST00000462236 UGDHO60701 494 aa4.78□□□□□ -1.64
COPS3-204ENST00000462236 GCNT3O95395 438 aa4.78□□□□□ -1.64
COPS3-204ENST00000462236 DDAH2O95865 285 aa4.78□□□□□ -1.64
COPS3-204ENST00000462236 IGLV3-27P01718 113 aa4.78□□□□□ -1.64
COPS3-204ENST00000462236 ATP5BP06576 529 aaKnown RBP4.78□□□□□ -1.64
COPS3-204ENST00000462236 FAM200BP0CF97 657 aa4.78□□□□□ -1.64
COPS3-204ENST00000462236 RALAP11233 206 aa4.78□□□□□ -1.64
COPS3-204ENST00000462236 UBA7P41226 1012 aa4.78□□□□□ -1.64
COPS3-204ENST00000462236 BLKP51451 505 aa4.78□□□□□ -1.64
COPS3-204ENST00000462236 NDST1P52848 882 aa4.78□□□□□ -1.64
COPS3-204ENST00000462236 METAP1P53582 386 aa4.78□□□□□ -1.64
COPS3-204ENST00000462236 TAS2R38P59533 333 aa4.78□□□□□ -1.64
COPS3-204ENST00000462236 PMPCAQ10713 525 aa4.78□□□□□ -1.64
COPS3-204ENST00000462236 TGIF1Q15583 401 aa4.78□□□□□ -1.64
COPS3-204ENST00000462236 SNRNP35Q16560 246 aaKnown RBP4.78□□□□□ -1.64
COPS3-204ENST00000462236 SLC18A3Q16572 532 aa4.78□□□□□ -1.64
COPS3-204ENST00000462236 SRSF7Q16629 238 aaKnown RBP eCLIP4.78□□□□□ -1.64
COPS3-204ENST00000462236 NFIL3Q16649 462 aa4.78□□□□□ -1.64
COPS3-204ENST00000462236 ALG10Q5BKT4 473 aa4.78□□□□□ -1.64
COPS3-204ENST00000462236 FAM133BQ5BKY9 247 aaKnown RBP4.78□□□□□ -1.64
COPS3-204ENST00000462236 ARL13AQ5H913 290 aaPredicted RBP4.78□□□□□ -1.64
COPS3-204ENST00000462236 ALG10BQ5I7T1 473 aa4.78□□□□□ -1.64
COPS3-204ENST00000462236 SH2D4BQ5SQS7 431 aa4.78□□□□□ -1.64
COPS3-204ENST00000462236 C10orf25Q5T742 122 aa4.78□□□□□ -1.64
COPS3-204ENST00000462236 PM20D1Q6GTS8 502 aa4.78□□□□□ -1.64
COPS3-204ENST00000462236 DPY19L2P1Q6NXN4 242 aa4.78□□□□□ -1.64
COPS3-204ENST00000462236 GUSBP11Q6P575 273 aa4.78□□□□□ -1.64
COPS3-204ENST00000462236 RNF144BQ7Z419 303 aa4.78□□□□□ -1.64
COPS3-204ENST00000462236 KDELC2Q7Z4H8 507 aa4.78□□□□□ -1.64
COPS3-204ENST00000462236 ABI3BPQ7Z7G0 1075 aa4.78□□□□□ -1.64
COPS3-204ENST00000462236 TADA2BQ86TJ2 420 aa4.78□□□□□ -1.64
COPS3-204ENST00000462236 ANKRD13BQ86YJ7 626 aa4.78□□□□□ -1.64
COPS3-204ENST00000462236 CNGA4Q8IV77 575 aa4.78□□□□□ -1.64
COPS3-204ENST00000462236 MMAAQ8IVH4 418 aaKnown RBP4.78□□□□□ -1.64
COPS3-204ENST00000462236 C12orf56Q8IXR9 622 aa4.78□□□□□ -1.64
COPS3-204ENST00000462236 SLC22A18ASQ8N1D0 253 aa4.78□□□□□ -1.64
COPS3-204ENST00000462236 ARL14Q8N4G2 192 aa4.78□□□□□ -1.64
COPS3-204ENST00000462236 C16orf52Q8NHV5 167 aa4.78□□□□□ -1.64
COPS3-204ENST00000462236 FIBINQ8TAL6 211 aa4.78□□□□□ -1.64
COPS3-204ENST00000462236 MAPK15Q8TD08 544 aa4.78□□□□□ -1.64
COPS3-204ENST00000462236 FAR1Q8WVX9 515 aa4.78□□□□□ -1.64
COPS3-204ENST00000462236 CNOT9Q92600 299 aaKnown RBP4.78□□□□□ -1.64
COPS3-204ENST00000462236 KAT2AQ92830 837 aa4.78□□□□□ -1.64
COPS3-204ENST00000462236 MIB2Q96AX9 1013 aa4.78□□□□□ -1.64
COPS3-204ENST00000462236 MED10Q9BTT4 135 aa4.78□□□□□ -1.64
COPS3-204ENST00000462236 FRMD8Q9BZ67 464 aaPredicted RBP4.78□□□□□ -1.64
COPS3-204ENST00000462236 PREBQ9HCU5 417 aa4.78□□□□□ -1.64
COPS3-204ENST00000462236 TUBA8Q9NY65 449 aaPredicted RBP4.78□□□□□ -1.64
COPS3-204ENST00000462236 TBC1D7Q9P0N9 293 aa4.78□□□□□ -1.64
COPS3-204ENST00000462236 PLEKHB1Q9UF11 243 aaPredicted RBP4.78□□□□□ -1.64
COPS3-204ENST00000462236 RASAL2Q9UJF2 1139 aa4.78□□□□□ -1.64
COPS3-204ENST00000462236 ANAPC2Q9UJX6 822 aa4.78□□□□□ -1.64
COPS3-204ENST00000462236 CA5BQ9Y2D0 317 aa4.78□□□□□ -1.64
COPS3-204ENST00000462236 CSNK1G3Q9Y6M4 447 aa4.78□□□□□ -1.64
COPS3-204ENST00000462236 GTF3C1Q12789 2109 aa4.78□□□□□ -1.64
COPS3-204ENST00000462236 CROCCQ5TZA2 2017 aa4.77□□□□□ -1.65
COPS3-204ENST00000462236 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.77□□□□□ -1.65
COPS3-204ENST00000462236 EDDM13A0A1B0GTR0 161 aa4.77□□□□□ -1.65
COPS3-204ENST00000462236 C17orf113A0A1B0GUU1 675 aa4.77□□□□□ -1.65
COPS3-204ENST00000462236 KCNU1A8MYU2 1149 aa4.77□□□□□ -1.65
COPS3-204ENST00000462236 TEX22C9J3V5 150 aa4.77□□□□□ -1.65
COPS3-204ENST00000462236 TSPAN4O14817 238 aa4.77□□□□□ -1.65
COPS3-204ENST00000462236 EIF3DO15371 548 aaKnown RBP eCLIP4.77□□□□□ -1.65
COPS3-204ENST00000462236 NVLO15381 856 aaKnown RBP4.77□□□□□ -1.65
COPS3-204ENST00000462236 RNASEH1O60930 286 aaKnown RBP4.77□□□□□ -1.65
COPS3-204ENST00000462236 RNASEH2AO75792 299 aaKnown RBP4.77□□□□□ -1.65
COPS3-204ENST00000462236 TMEM63AO94886 807 aa4.77□□□□□ -1.65
COPS3-204ENST00000462236 TNFSF15O95150 251 aa4.77□□□□□ -1.65
COPS3-204ENST00000462236 ASS1P00966 412 aaKnown RBP4.77□□□□□ -1.65
COPS3-204ENST00000462236 SERPINC1P01008 464 aa4.77□□□□□ -1.65
COPS3-204ENST00000462236 SRPRAP08240 638 aaKnown RBP4.77□□□□□ -1.65
COPS3-204ENST00000462236 HMBSP08397 361 aa4.77□□□□□ -1.65
COPS3-204ENST00000462236 MYZAPP0CAP1 466 aa4.77□□□□□ -1.65
COPS3-204ENST00000462236 THEGLP0DJG4 465 aa4.77□□□□□ -1.65
COPS3-204ENST00000462236 DLATP10515 647 aaKnown RBP4.77□□□□□ -1.65
COPS3-204ENST00000462236 LIPCP11150 499 aa4.77□□□□□ -1.65
COPS3-204ENST00000462236 TNNI1P19237 187 aa4.77□□□□□ -1.65
COPS3-204ENST00000462236 POLR2EP19388 210 aaKnown RBP4.77□□□□□ -1.65
COPS3-204ENST00000462236 UGT1A5P35504 534 aa4.77□□□□□ -1.65
COPS3-204ENST00000462236 KRT9P35527 623 aa4.77□□□□□ -1.65
COPS3-204ENST00000462236 CSKP41240 450 aa4.77□□□□□ -1.65
COPS3-204ENST00000462236 ARHGAP25P42331 645 aa4.77□□□□□ -1.65
COPS3-204ENST00000462236 ZNF91Q05481 1191 aa4.77□□□□□ -1.65
COPS3-204ENST00000462236 ZNF177Q13360 481 aaPredicted RBP4.77□□□□□ -1.65
COPS3-204ENST00000462236 NAA25Q14CX7 972 aa4.77□□□□□ -1.65
COPS3-204ENST00000462236 RPE65Q16518 533 aa4.77□□□□□ -1.65
COPS3-204ENST00000462236 PRICKLE4Q2TBC4 344 aa4.77□□□□□ -1.65
COPS3-204ENST00000462236 AP5B1Q2VPB7 878 aa4.77□□□□□ -1.65
COPS3-204ENST00000462236 KRTAP21-3Q3LHN1 58 aa4.77□□□□□ -1.65
COPS3-204ENST00000462236 ZNF766Q5HY98 468 aa4.77□□□□□ -1.65
COPS3-204ENST00000462236 ZNF667Q5HYK9 610 aa4.77□□□□□ -1.65
COPS3-204ENST00000462236 PIK3CD-AS1Q5SR53 167 aa4.77□□□□□ -1.65
COPS3-204ENST00000462236 NADSYN1Q6IA69 706 aa4.77□□□□□ -1.65
COPS3-204ENST00000462236 ZNF793Q6ZN11 406 aa4.77□□□□□ -1.65
COPS3-204ENST00000462236 GCNT7Q6ZNI0 430 aa4.77□□□□□ -1.65
COPS3-204ENST00000462236 RSRC2Q7L4I2 434 aaKnown RBP4.77□□□□□ -1.65
COPS3-204ENST00000462236 PRPF39Q86UA1 669 aaKnown RBP4.77□□□□□ -1.65
COPS3-204ENST00000462236 ARMC8Q8IUR7 673 aa4.77□□□□□ -1.65
COPS3-204ENST00000462236 SYCP3Q8IZU3 236 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms