RNA–Protein interactions for RNA: ENST00000462125.5

C9orf3-210, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 961 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-210ENST00000462125 KCNE1BA0A087WTH5 132 aa12.6□□□□□ -0.39
C9orf3-210ENST00000462125 A6NL46 340 aa12.6□□□□□ -0.39
C9orf3-210ENST00000462125 TSPAN12O95859 305 aa12.6□□□□□ -0.39
C9orf3-210ENST00000462125 EIF2S1P05198 315 aaKnown RBP12.6□□□□□ -0.39
C9orf3-210ENST00000462125 ARL4CP56559 192 aa12.6□□□□□ -0.39
C9orf3-210ENST00000462125 SP140Q13342 867 aa12.6□□□□□ -0.39
C9orf3-210ENST00000462125 HP1BP3Q5SSJ5 553 aaPredicted RBP12.6□□□□□ -0.39
C9orf3-210ENST00000462125 TEX35Q5T0J7 233 aa12.6□□□□□ -0.39
C9orf3-210ENST00000462125 HECTD2Q5U5R9 776 aa12.6□□□□□ -0.39
C9orf3-210ENST00000462125 GARNL3Q5VVW2 1013 aa12.6□□□□□ -0.39
C9orf3-210ENST00000462125 ZNF572Q7Z3I7 529 aaPredicted RBP12.6□□□□□ -0.39
C9orf3-210ENST00000462125 GALNT16Q8N428 558 aa12.6□□□□□ -0.39
C9orf3-210ENST00000462125 DTWD1Q8N5C7 304 aa12.6□□□□□ -0.39
C9orf3-210ENST00000462125 CLEC1AQ8NC01 280 aa12.6□□□□□ -0.39
C9orf3-210ENST00000462125 MIB2Q96AX9 1013 aa12.6□□□□□ -0.39
C9orf3-210ENST00000462125 PDLIM5Q96HC4 596 aaKnown RBP12.6□□□□□ -0.39
C9orf3-210ENST00000462125 C10orf90Q96M02 699 aa12.6□□□□□ -0.39
C9orf3-210ENST00000462125 PCBD2Q9H0N5 130 aa12.6□□□□□ -0.39
C9orf3-210ENST00000462125 ATP13A2Q9NQ11 1180 aa12.6□□□□□ -0.39
C9orf3-210ENST00000462125 SEMA3GQ9NS98 782 aa12.6□□□□□ -0.39
C9orf3-210ENST00000462125 STOX2Q9P2F5 926 aaPredicted RBP12.6□□□□□ -0.39
C9orf3-210ENST00000462125 CDC14AQ9UNH5 594 aa12.6□□□□□ -0.39
C9orf3-210ENST00000462125 CHMP2BQ9UQN3 213 aa12.6□□□□□ -0.39
C9orf3-210ENST00000462125 HS3ST3B1Q9Y662 390 aa12.6□□□□□ -0.39
C9orf3-210ENST00000462125 CCDC88CQ9P219 2028 aa12.6□□□□□ -0.39
C9orf3-210ENST00000462125 UBR5O95071 2799 aaPredicted RBP12.59□□□□□ -0.39
C9orf3-210ENST00000462125 H7BY64 318 aa12.59□□□□□ -0.39
C9orf3-210ENST00000462125 TXNDC9O14530 226 aa12.59□□□□□ -0.39
C9orf3-210ENST00000462125 SOCS6O14544 535 aa12.59□□□□□ -0.39
C9orf3-210ENST00000462125 NDC80O14777 642 aa12.59□□□□□ -0.39
C9orf3-210ENST00000462125 KLHL41O60662 606 aa12.59□□□□□ -0.39
C9orf3-210ENST00000462125 DPM1O60762 260 aa12.59□□□□□ -0.39
C9orf3-210ENST00000462125 SORBS2O94875 1100 aaKnown RBP12.59□□□□□ -0.39
C9orf3-210ENST00000462125 FDXRP22570 491 aa12.59□□□□□ -0.39
C9orf3-210ENST00000462125 RPL21P46778 160 aaKnown RBP12.59□□□□□ -0.39
C9orf3-210ENST00000462125 MLLT10P55197 1068 aa12.59□□□□□ -0.39
C9orf3-210ENST00000462125 IL2P60568 153 aa12.59□□□□□ -0.39
C9orf3-210ENST00000462125 TSTA3Q13630 321 aaPredicted RBP12.59□□□□□ -0.39
C9orf3-210ENST00000462125 MYBPC3Q14896 1274 aa12.59□□□□□ -0.39
C9orf3-210ENST00000462125 ERCC6LQ2NKX8 1250 aa12.59□□□□□ -0.39
C9orf3-210ENST00000462125 ZXDCQ2QGD7 858 aaPredicted RBP12.59□□□□□ -0.39
C9orf3-210ENST00000462125 NADK2Q4G0N4 442 aa12.59□□□□□ -0.39
C9orf3-210ENST00000462125 COLEC12Q5KU26 742 aa12.59□□□□□ -0.39
C9orf3-210ENST00000462125 FAM45BPQ6NSW5 357 aa12.59□□□□□ -0.39
C9orf3-210ENST00000462125 AGTRAPQ6RW13 159 aa12.59□□□□□ -0.39
C9orf3-210ENST00000462125 KIRREL2Q6UWL6 708 aa12.59□□□□□ -0.39
C9orf3-210ENST00000462125 IGFL3Q6UXB1 125 aa12.59□□□□□ -0.39
C9orf3-210ENST00000462125 PALM2Q8IXS6 379 aa12.59□□□□□ -0.39
C9orf3-210ENST00000462125 MYO1HQ8N1T3 1032 aa12.59□□□□□ -0.39
C9orf3-210ENST00000462125 CSNK1A1LQ8N752 337 aa12.59□□□□□ -0.39
C9orf3-210ENST00000462125 RBMXL3Q8N7X1 1067 aaKnown RBP12.59□□□□□ -0.39
C9orf3-210ENST00000462125 BBOF1Q8ND07 529 aa12.59□□□□□ -0.39
C9orf3-210ENST00000462125 SPATA4Q8NEY3 305 aa12.59□□□□□ -0.39
C9orf3-210ENST00000462125 FAM45AQ8TCE6 357 aa12.59□□□□□ -0.39
C9orf3-210ENST00000462125 STT3BQ8TCJ2 826 aa12.59□□□□□ -0.39
C9orf3-210ENST00000462125 CFAP36Q96G28 342 aa12.59□□□□□ -0.39
C9orf3-210ENST00000462125 PRAP1Q96NZ9 151 aa12.59□□□□□ -0.39
C9orf3-210ENST00000462125 KRT12Q99456 494 aa12.59□□□□□ -0.39
C9orf3-210ENST00000462125 SGPP1Q9BX95 441 aa12.59□□□□□ -0.39
C9orf3-210ENST00000462125 ZNF552Q9H707 407 aaPredicted RBP12.59□□□□□ -0.39
C9orf3-210ENST00000462125 PPANQ9NQ55 473 aaKnown RBP12.59□□□□□ -0.39
C9orf3-210ENST00000462125 CCDC177Q9NQR7 707 aaPredicted RBP12.59□□□□□ -0.39
C9orf3-210ENST00000462125 SLC17A6Q9P2U8 582 aa12.59□□□□□ -0.39
C9orf3-210ENST00000462125 CTSFQ9UBX1 484 aa12.59□□□□□ -0.39
C9orf3-210ENST00000462125 ZNF282Q9UDV7 671 aaPredicted RBP12.59□□□□□ -0.39
C9orf3-210ENST00000462125 RUVBL1Q9Y265 456 aaKnown RBP12.59□□□□□ -0.39
C9orf3-210ENST00000462125 SNX24Q9Y343 169 aa12.59□□□□□ -0.39
C9orf3-210ENST00000462125 MAU2Q9Y6X3 613 aa12.59□□□□□ -0.39
C9orf3-210ENST00000462125 UNC79Q9P2D8 2635 aa12.59□□□□□ -0.39
C9orf3-210ENST00000462125 FAM187AA6NFU0 413 aa12.58□□□□□ -0.4
C9orf3-210ENST00000462125 FOXS1O43638 330 aa12.58□□□□□ -0.4
C9orf3-210ENST00000462125 HIST1H2AGP0C0S8 130 aaPredicted RBP12.58□□□□□ -0.4
C9orf3-210ENST00000462125 ZGLP1P0C6A0 271 aa12.58□□□□□ -0.4
C9orf3-210ENST00000462125 ATXN8OSP0DMR3 200 aa12.58□□□□□ -0.4
C9orf3-210ENST00000462125 NPPBP16860 134 aa12.58□□□□□ -0.4
C9orf3-210ENST00000462125 HIST1H2ADP20671 130 aa12.58□□□□□ -0.4
C9orf3-210ENST00000462125 SLC26A3P40879 764 aa12.58□□□□□ -0.4
C9orf3-210ENST00000462125 OCA2Q04671 838 aa12.58□□□□□ -0.4
C9orf3-210ENST00000462125 MGAT5Q09328 741 aa12.58□□□□□ -0.4
C9orf3-210ENST00000462125 PDIA2Q13087 525 aaKnown RBP12.58□□□□□ -0.4
C9orf3-210ENST00000462125 AIMP2Q13155 320 aaKnown RBP12.58□□□□□ -0.4
C9orf3-210ENST00000462125 FAM53BQ14153 422 aa12.58□□□□□ -0.4
C9orf3-210ENST00000462125 PHKG1Q16816 387 aa12.58□□□□□ -0.4
C9orf3-210ENST00000462125 HKDC1Q2TB90 917 aa12.58□□□□□ -0.4
C9orf3-210ENST00000462125 THEMIS2Q5TEJ8 643 aa12.58□□□□□ -0.4
C9orf3-210ENST00000462125 VWA5B1Q5TIE3 1220 aa12.58□□□□□ -0.4
C9orf3-210ENST00000462125 ATG9BQ674R7 924 aa12.58□□□□□ -0.4
C9orf3-210ENST00000462125 JMJD6Q6NYC1 403 aaPredicted RBP12.58□□□□□ -0.4
C9orf3-210ENST00000462125 ANKMY2Q8IV38 441 aa12.58□□□□□ -0.4
C9orf3-210ENST00000462125 METTL27Q8N6F8 245 aaPredicted RBP12.58□□□□□ -0.4
C9orf3-210ENST00000462125 FBXO36Q8NEA4 188 aa12.58□□□□□ -0.4
C9orf3-210ENST00000462125 RERGQ96A58 199 aaPredicted RBP12.58□□□□□ -0.4
C9orf3-210ENST00000462125 THAP11Q96EK4 314 aa12.58□□□□□ -0.4
C9orf3-210ENST00000462125 LINGO1Q96FE5 620 aa12.58□□□□□ -0.4
C9orf3-210ENST00000462125 CABS1Q96KC9 395 aa12.58□□□□□ -0.4
C9orf3-210ENST00000462125 HIST1H2AHQ96KK5 128 aa12.58□□□□□ -0.4
C9orf3-210ENST00000462125 OLFM1Q99784 485 aa12.58□□□□□ -0.4
C9orf3-210ENST00000462125 HIST1H2AJQ99878 128 aa12.58□□□□□ -0.4
C9orf3-210ENST00000462125 ERP44Q9BS26 406 aa12.58□□□□□ -0.4
C9orf3-210ENST00000462125 H2AFJQ9BTM1 129 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms