RNA–Protein interactions for RNA: ENST00000461377.5

CCM2-203, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,983 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-203ENST00000461377 OR8J2Q8NGG1 315 aa19.53■□□□□ 0.72
CCM2-203ENST00000461377 TFAP2CQ92754 450 aa19.53■□□□□ 0.72
CCM2-203ENST00000461377 FAM120BQ96EK7 910 aaKnown RBP19.53■□□□□ 0.72
CCM2-203ENST00000461377 TBCDQ9BTW9 1192 aa19.53■□□□□ 0.72
CCM2-203ENST00000461377 EFCAB11Q9BUY7 163 aa19.53■□□□□ 0.72
CCM2-203ENST00000461377 ANKRD60Q9BZ19 345 aa19.53■□□□□ 0.72
CCM2-203ENST00000461377 EHD1Q9H4M9 534 aa19.53■□□□□ 0.72
CCM2-203ENST00000461377 ZNF639Q9UID6 485 aa19.53■□□□□ 0.72
CCM2-203ENST00000461377 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.52■□□□□ 0.72
CCM2-203ENST00000461377 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.52■□□□□ 0.72
CCM2-203ENST00000461377 SCN2BO60939 215 aa19.52■□□□□ 0.72
CCM2-203ENST00000461377 ADH1BP00325 375 aa19.52■□□□□ 0.72
CCM2-203ENST00000461377 C7P10643 843 aa19.52■□□□□ 0.72
CCM2-203ENST00000461377 LAMP2P13473 410 aa19.52■□□□□ 0.72
CCM2-203ENST00000461377 RPS13P62277 151 aaKnown RBP19.52■□□□□ 0.72
CCM2-203ENST00000461377 SLBPQ14493 270 aaKnown RBP eCLIP19.52■□□□□ 0.72
CCM2-203ENST00000461377 AGERQ15109 404 aa19.52■□□□□ 0.72
CCM2-203ENST00000461377 RAB30Q15771 203 aa19.52■□□□□ 0.72
CCM2-203ENST00000461377 DUOXA1Q1HG43 343 aa19.52■□□□□ 0.72
CCM2-203ENST00000461377 SPIN4Q56A73 249 aa19.52■□□□□ 0.72
CCM2-203ENST00000461377 ATAT1Q5SQI0 421 aa19.52■□□□□ 0.72
CCM2-203ENST00000461377 C10orf62Q5T681 223 aaPredicted RBP19.52■□□□□ 0.72
CCM2-203ENST00000461377 AMZ2Q86W34 360 aa19.52■□□□□ 0.72
CCM2-203ENST00000461377 LAS2Q8IYD9 372 aa19.52■□□□□ 0.72
CCM2-203ENST00000461377 C10orf111Q8N326 155 aa19.52■□□□□ 0.72
CCM2-203ENST00000461377 OXR1Q8N573 874 aa19.52■□□□□ 0.72
CCM2-203ENST00000461377 LMNTD1Q8N9Z9 388 aa19.52■□□□□ 0.72
CCM2-203ENST00000461377 SPDYE1Q8NFV5 336 aaPredicted RBP19.52■□□□□ 0.72
CCM2-203ENST00000461377 STARD8Q92502 1023 aa19.52■□□□□ 0.72
CCM2-203ENST00000461377 CARS2Q9HA77 564 aaKnown RBP19.52■□□□□ 0.72
CCM2-203ENST00000461377 CCDC177Q9NQR7 707 aaPredicted RBP19.52■□□□□ 0.72
CCM2-203ENST00000461377 GEMIN8Q9NWZ8 242 aaKnown RBP19.52■□□□□ 0.72
CCM2-203ENST00000461377 ADGRE2Q9UHX3 823 aa19.52■□□□□ 0.72
CCM2-203ENST00000461377 DOCK8Q8NF50 2099 aa19.52■□□□□ 0.72
CCM2-203ENST00000461377 RNF103-CHMP3A0A140T963 221 aa19.52■□□□□ 0.71
CCM2-203ENST00000461377 CLOCKO15516 846 aa19.52■□□□□ 0.71
CCM2-203ENST00000461377 COX7A2P14406 83 aa19.52■□□□□ 0.71
CCM2-203ENST00000461377 C5AR1P21730 350 aa19.52■□□□□ 0.71
CCM2-203ENST00000461377 CHRNB3Q05901 458 aa19.52■□□□□ 0.71
CCM2-203ENST00000461377 ABHD18Q0P651 414 aa19.52■□□□□ 0.71
CCM2-203ENST00000461377 SF1Q15637 639 aaKnown RBP19.52■□□□□ 0.71
CCM2-203ENST00000461377 LRRTM4Q86VH4 590 aa19.52■□□□□ 0.71
CCM2-203ENST00000461377 ZNF513Q8N8E2 541 aaPredicted RBP19.52■□□□□ 0.71
CCM2-203ENST00000461377 SLC5A11Q8WWX8 675 aa19.52■□□□□ 0.71
CCM2-203ENST00000461377 RPP25Q9BUL9 199 aaKnown RBP19.52■□□□□ 0.71
CCM2-203ENST00000461377 BDH2Q9BUT1 245 aa19.52■□□□□ 0.71
CCM2-203ENST00000461377 LGR4Q9BXB1 951 aa19.52■□□□□ 0.71
CCM2-203ENST00000461377 UGT2B28Q9BY64 529 aa19.52■□□□□ 0.71
CCM2-203ENST00000461377 SLC28A3Q9HAS3 691 aa19.52■□□□□ 0.71
CCM2-203ENST00000461377 FAM120CQ9NX05 1096 aaKnown RBP19.52■□□□□ 0.71
CCM2-203ENST00000461377 SLC23A2Q9UGH3 650 aa19.52■□□□□ 0.71
CCM2-203ENST00000461377 SERGEFQ9UGK8 458 aa19.52■□□□□ 0.71
CCM2-203ENST00000461377 FOXE1O00358 373 aaPredicted RBP19.51■□□□□ 0.71
CCM2-203ENST00000461377 SCAMP2O15127 329 aaKnown RBP19.51■□□□□ 0.71
CCM2-203ENST00000461377 PRSS23O95084 383 aa19.51■□□□□ 0.71
CCM2-203ENST00000461377 PCDH8O95206 1070 aa19.51■□□□□ 0.71
CCM2-203ENST00000461377 ASMTP46597 345 aa19.51■□□□□ 0.71
CCM2-203ENST00000461377 TSTA3Q13630 321 aaPredicted RBP19.51■□□□□ 0.71
CCM2-203ENST00000461377 LIN52Q52LA3 116 aa19.51■□□□□ 0.71
CCM2-203ENST00000461377 PAGE2BQ5JRK9 111 aa19.51■□□□□ 0.71
CCM2-203ENST00000461377 NXPE4Q6UWF7 544 aa19.51■□□□□ 0.71
CCM2-203ENST00000461377 HDDC3Q8N4P3 179 aa19.51■□□□□ 0.71
CCM2-203ENST00000461377 FAM86B1Q8N7N1 296 aa19.51■□□□□ 0.71
CCM2-203ENST00000461377 FAM162AQ96A26 154 aa19.51■□□□□ 0.71
CCM2-203ENST00000461377 TRMT61BQ9BVS5 477 aaKnown RBP19.51■□□□□ 0.71
CCM2-203ENST00000461377 LIMD1Q9UGP4 676 aa19.51■□□□□ 0.71
CCM2-203ENST00000461377 ASF1AQ9Y294 204 aa19.51■□□□□ 0.71
CCM2-203ENST00000461377 DNMT3AQ9Y6K1 912 aaPredicted RBP19.51■□□□□ 0.71
CCM2-203ENST00000461377 PIPSLA2A3N6 862 aa19.5■□□□□ 0.71
CCM2-203ENST00000461377 RETP07949 1114 aa19.5■□□□□ 0.71
CCM2-203ENST00000461377 KELP23276 732 aa19.5■□□□□ 0.71
CCM2-203ENST00000461377 TIA1P31483 386 aaKnown RBP eCLIP19.5■□□□□ 0.71
CCM2-203ENST00000461377 SOX9P48436 509 aa19.5■□□□□ 0.71
CCM2-203ENST00000461377 IYDQ6PHW0 289 aa19.5■□□□□ 0.71
CCM2-203ENST00000461377 ENPP6Q6UWR7 440 aa19.5■□□□□ 0.71
CCM2-203ENST00000461377 ISLR2Q6UXK2 745 aa19.5■□□□□ 0.71
CCM2-203ENST00000461377 DCUN1D3Q8IWE4 304 aa19.5■□□□□ 0.71
CCM2-203ENST00000461377 SETD7Q8WTS6 366 aaKnown RBP19.5■□□□□ 0.71
CCM2-203ENST00000461377 RAD51AP1Q96B01 352 aa19.5■□□□□ 0.71
CCM2-203ENST00000461377 REXO5Q96IC2 774 aaKnown RBP19.5■□□□□ 0.71
CCM2-203ENST00000461377 TEX101Q9BY14 249 aa19.5■□□□□ 0.71
CCM2-203ENST00000461377 NTN4Q9HB63 628 aa19.5■□□□□ 0.71
CCM2-203ENST00000461377 SIRT5Q9NXA8 310 aa19.5■□□□□ 0.71
CCM2-203ENST00000461377 MAPRE3Q9UPY8 281 aa19.5■□□□□ 0.71
CCM2-203ENST00000461377 PLOD2O00469 737 aa19.5■□□□□ 0.71
CCM2-203ENST00000461377 EI24O14681 340 aa19.5■□□□□ 0.71
CCM2-203ENST00000461377 FPGTO14772 594 aa19.5■□□□□ 0.71
CCM2-203ENST00000461377 PI15O43692 258 aa19.5■□□□□ 0.71
CCM2-203ENST00000461377 DEAF1O75398 565 aaPredicted RBP19.5■□□□□ 0.71
CCM2-203ENST00000461377 CREG1O75629 220 aa19.5■□□□□ 0.71
CCM2-203ENST00000461377 ANXA4P09525 319 aaPredicted RBP19.5■□□□□ 0.71
CCM2-203ENST00000461377 PAX7P23759 505 aa19.5■□□□□ 0.71
CCM2-203ENST00000461377 TEAD1P28347 426 aa19.5■□□□□ 0.71
CCM2-203ENST00000461377 GALK1P51570 392 aa19.5■□□□□ 0.71
CCM2-203ENST00000461377 NKG7Q16617 165 aa19.5■□□□□ 0.71
CCM2-203ENST00000461377 GALNT18Q6P9A2 607 aa19.5■□□□□ 0.71
CCM2-203ENST00000461377 ZNF551Q7Z340 670 aaPredicted RBP19.5■□□□□ 0.71
CCM2-203ENST00000461377 CAMKMTQ7Z624 323 aa19.5■□□□□ 0.71
CCM2-203ENST00000461377 OR5AR1Q8NGP9 310 aa19.5■□□□□ 0.71
CCM2-203ENST00000461377 CDC26Q8NHZ8 85 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms