RNA–Protein interactions for RNA: ENST00000459584.1

SNORD42A-201, Transcript of small nucleolar RNA, C/D box 42A, humanhuman

BASIC

Gene SNORD42A, Length 64 nt, Biotype snoRNA, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD42A-201ENST00000459584 SAGP10523 405 aaPredicted RBP3.01□□□□□ -1.93
SNORD42A-201ENST00000459584 GP1BBP13224 206 aa3.01□□□□□ -1.93
SNORD42A-201ENST00000459584 HLA-FP30511 346 aa3.01□□□□□ -1.93
SNORD42A-201ENST00000459584 TLX1P31314 330 aaPredicted RBP3.01□□□□□ -1.93
SNORD42A-201ENST00000459584 RGS19P49795 217 aa3.01□□□□□ -1.93
SNORD42A-201ENST00000459584 CSE1LP55060 971 aaKnown RBP3.01□□□□□ -1.93
SNORD42A-201ENST00000459584 TMEM50BP56557 158 aa3.01□□□□□ -1.93
SNORD42A-201ENST00000459584 RBPJQ06330 500 aa3.01□□□□□ -1.93
SNORD42A-201ENST00000459584 ACSM1Q08AH1 577 aa3.01□□□□□ -1.93
SNORD42A-201ENST00000459584 LY6DQ14210 128 aa3.01□□□□□ -1.93
SNORD42A-201ENST00000459584 MTHFSDQ2M296 383 aaKnown RBP3.01□□□□□ -1.93
SNORD42A-201ENST00000459584 C9orf152Q5JTZ5 239 aa3.01□□□□□ -1.93
SNORD42A-201ENST00000459584 WDR78Q5VTH9 848 aa3.01□□□□□ -1.93
SNORD42A-201ENST00000459584 Q8N377 158 aa3.01□□□□□ -1.93
SNORD42A-201ENST00000459584 PROX1Q92786 737 aa3.01□□□□□ -1.93
SNORD42A-201ENST00000459584 ARSGQ96EG1 525 aa3.01□□□□□ -1.93
SNORD42A-201ENST00000459584 AGAP4Q96P64 663 aa3.01□□□□□ -1.93
SNORD42A-201ENST00000459584 TDRD1Q9BXT4 1180 aaKnown RBP3.01□□□□□ -1.93
SNORD42A-201ENST00000459584 B3GAT2Q9NPZ5 323 aa3.01□□□□□ -1.93
SNORD42A-201ENST00000459584 TBC1D7Q9P0N9 293 aa3.01□□□□□ -1.93
SNORD42A-201ENST00000459584 WDR35Q9P2L0 1181 aa3.01□□□□□ -1.93
SNORD42A-201ENST00000459584 ADAMTS9Q9P2N4 1935 aa3.01□□□□□ -1.93
SNORD42A-201ENST00000459584 H0YAE9 185 aa3□□□□□ -1.93
SNORD42A-201ENST00000459584 SNX3O60493 162 aa3□□□□□ -1.93
SNORD42A-201ENST00000459584 ATP6AP2O75787 350 aa3□□□□□ -1.93
SNORD42A-201ENST00000459584 PDHA2P29803 388 aa3□□□□□ -1.93
SNORD42A-201ENST00000459584 OR3A2P47893 321 aa3□□□□□ -1.93
SNORD42A-201ENST00000459584 ALDH3A2P51648 485 aa3□□□□□ -1.93
SNORD42A-201ENST00000459584 UBASH3AP57075 661 aa3□□□□□ -1.93
SNORD42A-201ENST00000459584 PAX8Q06710 450 aa3□□□□□ -1.93
SNORD42A-201ENST00000459584 RALBP1Q15311 655 aa3□□□□□ -1.93
SNORD42A-201ENST00000459584 NPTX1Q15818 432 aa3□□□□□ -1.93
SNORD42A-201ENST00000459584 FAM189A2Q15884 450 aa3□□□□□ -1.93
SNORD42A-201ENST00000459584 ERMARDQ5T6L9 678 aa3□□□□□ -1.93
SNORD42A-201ENST00000459584 KRT39Q6A163 491 aa3□□□□□ -1.93
SNORD42A-201ENST00000459584 FRRS1Q6ZNA5 592 aa3□□□□□ -1.93
SNORD42A-201ENST00000459584 BRINP3Q76B58 766 aa3□□□□□ -1.93
SNORD42A-201ENST00000459584 AMER3Q8N944 861 aa3□□□□□ -1.93
SNORD42A-201ENST00000459584 NOA1Q8NC60 698 aaKnown RBP3□□□□□ -1.93
SNORD42A-201ENST00000459584 KCTD6Q8NC69 237 aa3□□□□□ -1.93
SNORD42A-201ENST00000459584 METTL21AQ8WXB1 218 aa3□□□□□ -1.93
SNORD42A-201ENST00000459584 PIK3R3Q92569 461 aa3□□□□□ -1.93
SNORD42A-201ENST00000459584 ATXN7L3BQ96GX2 97 aa3□□□□□ -1.93
SNORD42A-201ENST00000459584 MAP3K3Q99759 626 aa3□□□□□ -1.93
SNORD42A-201ENST00000459584 CENPOQ9BU64 300 aa3□□□□□ -1.93
SNORD42A-201ENST00000459584 GSN-AS1Q9NRJ2 163 aa3□□□□□ -1.93
SNORD42A-201ENST00000459584 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3□□□□□ -1.93
SNORD42A-201ENST00000459584 CSAG2Q9Y5P2 127 aa3□□□□□ -1.93
SNORD42A-201ENST00000459584 ZNF318Q5VUA4 2279 aa3□□□□□ -1.93
SNORD42A-201ENST00000459584 RALGAPA1Q6GYQ0 2036 aa3□□□□□ -1.93
SNORD42A-201ENST00000459584 URADA6NGE7 173 aa2.99□□□□□ -1.93
SNORD42A-201ENST00000459584 ASB14A6NK59 587 aa2.99□□□□□ -1.93
SNORD42A-201ENST00000459584 O00370 1275 aa2.99□□□□□ -1.93
SNORD42A-201ENST00000459584 CLDN4O14493 209 aa2.99□□□□□ -1.93
SNORD42A-201ENST00000459584 RPS6KA5O75582 802 aa2.99□□□□□ -1.93
SNORD42A-201ENST00000459584 BAG3O95817 575 aa2.99□□□□□ -1.93
SNORD42A-201ENST00000459584 EPCAMP16422 314 aa2.99□□□□□ -1.93
SNORD42A-201ENST00000459584 ACHEP22303 614 aa2.99□□□□□ -1.93
SNORD42A-201ENST00000459584 CPT2P23786 658 aa2.99□□□□□ -1.93
SNORD42A-201ENST00000459584 ELAVL4P26378 380 aaKnown RBP2.99□□□□□ -1.93
SNORD42A-201ENST00000459584 CLDN15P56746 228 aa2.99□□□□□ -1.93
SNORD42A-201ENST00000459584 TRIM29Q14134 588 aa2.99□□□□□ -1.93
SNORD42A-201ENST00000459584 OPCMLQ14982 345 aa2.99□□□□□ -1.93
SNORD42A-201ENST00000459584 TAB1Q15750 504 aa2.99□□□□□ -1.93
SNORD42A-201ENST00000459584 TMEM266Q2M3C6 531 aa2.99□□□□□ -1.93
SNORD42A-201ENST00000459584 CRY2Q49AN0 593 aa2.99□□□□□ -1.93
SNORD42A-201ENST00000459584 ARMC4Q5T2S8 1044 aa2.99□□□□□ -1.93
SNORD42A-201ENST00000459584 OR4C11Q6IEV9 310 aa2.99□□□□□ -1.93
SNORD42A-201ENST00000459584 NAA16Q6N069 864 aaPredicted RBP2.99□□□□□ -1.93
SNORD42A-201ENST00000459584 ZNF774Q6NX45 483 aa2.99□□□□□ -1.93
SNORD42A-201ENST00000459584 CTR9Q6PD62 1173 aa2.99□□□□□ -1.93
SNORD42A-201ENST00000459584 CHMP1BQ7LBR1 199 aa2.99□□□□□ -1.93
SNORD42A-201ENST00000459584 PRPF39Q86UA1 669 aaKnown RBP2.99□□□□□ -1.93
SNORD42A-201ENST00000459584 TLK2Q86UE8 772 aa2.99□□□□□ -1.93
SNORD42A-201ENST00000459584 LRTM2Q8N967 370 aa2.99□□□□□ -1.93
SNORD42A-201ENST00000459584 RASGEF1AQ8N9B8 481 aa2.99□□□□□ -1.93
SNORD42A-201ENST00000459584 ROBO4Q8WZ75 1007 aa2.99□□□□□ -1.93
SNORD42A-201ENST00000459584 ZNF558Q96NG5 402 aa2.99□□□□□ -1.93
SNORD42A-201ENST00000459584 KLHL5Q96PQ7 755 aa2.99□□□□□ -1.93
SNORD42A-201ENST00000459584 SLF1Q9BQI6 1058 aa2.99□□□□□ -1.93
SNORD42A-201ENST00000459584 PI4K2AQ9BTU6 479 aa2.99□□□□□ -1.93
SNORD42A-201ENST00000459584 HOXD1Q9GZZ0 328 aa2.99□□□□□ -1.93
SNORD42A-201ENST00000459584 EGLN3Q9H6Z9 239 aa2.99□□□□□ -1.93
SNORD42A-201ENST00000459584 NDE1Q9NXR1 346 aa2.99□□□□□ -1.93
SNORD42A-201ENST00000459584 TXNDC16Q9P2K2 825 aa2.99□□□□□ -1.93
SNORD42A-201ENST00000459584 IGSF1Q8N6C5 1336 aa2.98□□□□□ -1.93
SNORD42A-201ENST00000459584 A0A1W2PPR1 153 aa2.98□□□□□ -1.93
SNORD42A-201ENST00000459584 GLTPD2A6NH11 291 aa2.98□□□□□ -1.93
SNORD42A-201ENST00000459584 NPIPB9F8W1W9 429 aa2.98□□□□□ -1.93
SNORD42A-201ENST00000459584 IGHV3-13P01766 116 aa2.98□□□□□ -1.93
SNORD42A-201ENST00000459584 SERPING1P05155 500 aa2.98□□□□□ -1.93
SNORD42A-201ENST00000459584 THEGLP0DJG4 465 aa2.98□□□□□ -1.93
SNORD42A-201ENST00000459584 HOXC13P31276 330 aa2.98□□□□□ -1.93
SNORD42A-201ENST00000459584 PPP5CP53041 499 aa2.98□□□□□ -1.93
SNORD42A-201ENST00000459584 LIMK1P53667 647 aa2.98□□□□□ -1.93
SNORD42A-201ENST00000459584 AIMP1Q12904 312 aaKnown RBP2.98□□□□□ -1.93
SNORD42A-201ENST00000459584 SGCGQ13326 291 aa2.98□□□□□ -1.93
SNORD42A-201ENST00000459584 PRPF4BQ13523 1007 aaKnown RBP2.98□□□□□ -1.93
SNORD42A-201ENST00000459584 TRA2AQ13595 282 aaKnown RBP eCLIP2.98□□□□□ -1.932e-7■■■■□ 21.5
SNORD42A-201ENST00000459584 MFSD4BQ5TF39 518 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms