RNA–Protein interactions for RNA: ENST00000457109.5

PKP4-207, Transcript of plakophilin 4, humanhuman

TSL 3

Gene PKP4, Length 520 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-207ENST00000457109 TRIP13Q15645 432 aaPredicted RBP8.39□□□□□ -1.07
PKP4-207ENST00000457109 INAQ16352 499 aa8.39□□□□□ -1.07
PKP4-207ENST00000457109 TYSND1Q2T9J0 566 aa8.39□□□□□ -1.07
PKP4-207ENST00000457109 PRTGQ2VWP7 1150 aa8.39□□□□□ -1.07
PKP4-207ENST00000457109 MINDY4Q4G0A6 757 aa8.39□□□□□ -1.07
PKP4-207ENST00000457109 ACSBG2Q5FVE4 666 aa8.39□□□□□ -1.07
PKP4-207ENST00000457109 CTSL3PQ5NE16 218 aa8.39□□□□□ -1.07
PKP4-207ENST00000457109 LRRC8EQ6NSJ5 796 aa8.39□□□□□ -1.07
PKP4-207ENST00000457109 MTFR2Q6P444 385 aa8.39□□□□□ -1.07
PKP4-207ENST00000457109 TMEM207Q6UWW9 146 aa8.39□□□□□ -1.07
PKP4-207ENST00000457109 GFRALQ6UXV0 394 aa8.39□□□□□ -1.07
PKP4-207ENST00000457109 LAPTM4BQ86VI4 370 aa8.39□□□□□ -1.07
PKP4-207ENST00000457109 REXO1L1PQ8IX06 675 aa8.39□□□□□ -1.07
PKP4-207ENST00000457109 TBC1D19Q8N5T2 526 aa8.39□□□□□ -1.07
PKP4-207ENST00000457109 SIRT6Q8N6T7 355 aa8.39□□□□□ -1.07
PKP4-207ENST00000457109 CATSPER1Q8NEC5 780 aa8.39□□□□□ -1.07
PKP4-207ENST00000457109 DNAJB8Q8NHS0 232 aa8.39□□□□□ -1.07
PKP4-207ENST00000457109 BRIX1Q8TDN6 353 aaKnown RBP8.39□□□□□ -1.07
PKP4-207ENST00000457109 HAS2Q92819 552 aa8.39□□□□□ -1.07
PKP4-207ENST00000457109 INPP5DQ92835 1189 aa8.39□□□□□ -1.07
PKP4-207ENST00000457109 MAGOHBQ96A72 148 aaKnown RBP8.39□□□□□ -1.07
PKP4-207ENST00000457109 HIST1H2AHQ96KK5 128 aa8.39□□□□□ -1.07
PKP4-207ENST00000457109 BIRC8Q96P09 236 aa8.39□□□□□ -1.07
PKP4-207ENST00000457109 NAP1L3Q99457 506 aaPredicted RBP8.39□□□□□ -1.07
PKP4-207ENST00000457109 HIST1H2AJQ99878 128 aa8.39□□□□□ -1.07
PKP4-207ENST00000457109 H2AFJQ9BTM1 129 aa8.39□□□□□ -1.07
PKP4-207ENST00000457109 TUBB6Q9BUF5 446 aa8.39□□□□□ -1.07
PKP4-207ENST00000457109 PCBD2Q9H0N5 130 aa8.39□□□□□ -1.07
PKP4-207ENST00000457109 XAB2Q9HCS7 855 aaKnown RBP8.39□□□□□ -1.07
PKP4-207ENST00000457109 C20orf96Q9NUD7 363 aaPredicted RBP8.39□□□□□ -1.07
PKP4-207ENST00000457109 PLA2G3Q9NZ20 509 aa8.39□□□□□ -1.07
PKP4-207ENST00000457109 KLHL42Q9P2K6 505 aa8.39□□□□□ -1.07
PKP4-207ENST00000457109 PCYOX1Q9UHG3 505 aa8.39□□□□□ -1.07
PKP4-207ENST00000457109 RUVBL1Q9Y265 456 aaKnown RBP8.39□□□□□ -1.07
PKP4-207ENST00000457109 NTNG1Q9Y2I2 539 aa8.39□□□□□ -1.07
PKP4-207ENST00000457109 CSAG2Q9Y5P2 127 aa8.39□□□□□ -1.07
PKP4-207ENST00000457109 MAD1L1Q9Y6D9 718 aa8.39□□□□□ -1.07
PKP4-207ENST00000457109 PTPN13Q12923 2485 aa8.39□□□□□ -1.07
PKP4-207ENST00000457109 RP1L1Q8IWN7 2480 aaPredicted RBP8.38□□□□□ -1.07
PKP4-207ENST00000457109 IGLV3-12A0A075B6K2 115 aa8.38□□□□□ -1.07
PKP4-207ENST00000457109 TRGV8A0A0C4DH27 118 aa8.38□□□□□ -1.07
PKP4-207ENST00000457109 FAM237BA0A1B0GVD1 139 aa8.38□□□□□ -1.07
PKP4-207ENST00000457109 A0A1W2PPV9 198 aa8.38□□□□□ -1.07
PKP4-207ENST00000457109 A8MUI8 341 aa8.38□□□□□ -1.07
PKP4-207ENST00000457109 H7BY64 318 aa8.38□□□□□ -1.07
PKP4-207ENST00000457109 MYO1CO00159 1063 aa8.38□□□□□ -1.07
PKP4-207ENST00000457109 HNRNPRO43390 633 aaKnown RBP8.38□□□□□ -1.07
PKP4-207ENST00000457109 AVILO75366 819 aa8.38□□□□□ -1.07
PKP4-207ENST00000457109 SLC16A8O95907 504 aa8.38□□□□□ -1.07
PKP4-207ENST00000457109 RNF224P0DH78 156 aa8.38□□□□□ -1.07
PKP4-207ENST00000457109 MPC1LP0DKB6 136 aa8.38□□□□□ -1.07
PKP4-207ENST00000457109 MLNP12872 115 aa8.38□□□□□ -1.07
PKP4-207ENST00000457109 SLC26A3P40879 764 aa8.38□□□□□ -1.07
PKP4-207ENST00000457109 SKIV2L2P42285 1042 aaKnown RBP8.38□□□□□ -1.07
PKP4-207ENST00000457109 RPS15AP62244 130 aaKnown RBP8.38□□□□□ -1.07
PKP4-207ENST00000457109 SKP1P63208 163 aa8.38□□□□□ -1.07
PKP4-207ENST00000457109 PTK6Q13882 451 aa8.38□□□□□ -1.07
PKP4-207ENST00000457109 ZRSR2Q15696 482 aaKnown RBP8.38□□□□□ -1.07
PKP4-207ENST00000457109 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.38□□□□□ -1.07
PKP4-207ENST00000457109 HKDC1Q2TB90 917 aa8.38□□□□□ -1.07
PKP4-207ENST00000457109 SP5Q6BEB4 398 aaPredicted RBP8.38□□□□□ -1.07
PKP4-207ENST00000457109 ZNF470Q6ECI4 717 aa8.38□□□□□ -1.07
PKP4-207ENST00000457109 UBE2R2Q712K3 238 aaPredicted RBP8.38□□□□□ -1.07
PKP4-207ENST00000457109 FJX1Q86VR8 437 aa8.38□□□□□ -1.07
PKP4-207ENST00000457109 PAQR7Q86WK9 346 aa8.38□□□□□ -1.07
PKP4-207ENST00000457109 CILP2Q8IUL8 1156 aa8.38□□□□□ -1.07
PKP4-207ENST00000457109 HORMAD2Q8N7B1 307 aa8.38□□□□□ -1.07
PKP4-207ENST00000457109 CAMKVQ8NCB2 501 aa8.38□□□□□ -1.07
PKP4-207ENST00000457109 ZNF669Q96BR6 464 aaPredicted RBP8.38□□□□□ -1.07
PKP4-207ENST00000457109 ALKBH8Q96BT7 664 aaKnown RBP8.38□□□□□ -1.07
PKP4-207ENST00000457109 THAP11Q96EK4 314 aa8.38□□□□□ -1.07
PKP4-207ENST00000457109 ZNF354BQ96LW1 612 aa8.38□□□□□ -1.07
PKP4-207ENST00000457109 PRAP1Q96NZ9 151 aa8.38□□□□□ -1.07
PKP4-207ENST00000457109 TRIM54Q9BYV2 358 aa8.38□□□□□ -1.07
PKP4-207ENST00000457109 FAM129AQ9BZQ8 928 aa8.38□□□□□ -1.07
PKP4-207ENST00000457109 TGIF2Q9GZN2 237 aa8.38□□□□□ -1.07
PKP4-207ENST00000457109 ANKHQ9HCJ1 492 aa8.38□□□□□ -1.07
PKP4-207ENST00000457109 CCDC177Q9NQR7 707 aaPredicted RBP8.38□□□□□ -1.07
PKP4-207ENST00000457109 TMEM184CQ9NVA4 438 aa8.38□□□□□ -1.07
PKP4-207ENST00000457109 COPG2Q9UBF2 871 aa8.38□□□□□ -1.07
PKP4-207ENST00000457109 TRMT6Q9UJA5 497 aaKnown RBP8.38□□□□□ -1.07
PKP4-207ENST00000457109 BSNQ9UPA5 3926 aa8.38□□□□□ -1.07
PKP4-207ENST00000457109 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.37□□□□□ -1.07
PKP4-207ENST00000457109 IGHV1-45A0A0A0MS14 117 aa8.37□□□□□ -1.07
PKP4-207ENST00000457109 KRT87PA6NCN2 255 aa8.37□□□□□ -1.07
PKP4-207ENST00000457109 PRSS44E7EML9 344 aa8.37□□□□□ -1.07
PKP4-207ENST00000457109 E7ENX8 843 aa8.37□□□□□ -1.07
PKP4-207ENST00000457109 H0YIG0 161 aa8.37□□□□□ -1.07
PKP4-207ENST00000457109 GOLGA8MH3BSY2 632 aa8.37□□□□□ -1.07
PKP4-207ENST00000457109 FFAR3O14843 346 aa8.37□□□□□ -1.07
PKP4-207ENST00000457109 GPR42O15529 346 aa8.37□□□□□ -1.07
PKP4-207ENST00000457109 CYC1P08574 325 aa8.37□□□□□ -1.07
PKP4-207ENST00000457109 ESRRAP11474 423 aaPredicted RBP8.37□□□□□ -1.07
PKP4-207ENST00000457109 COX6A1P12074 109 aa8.37□□□□□ -1.07
PKP4-207ENST00000457109 CCND1P24385 295 aa8.37□□□□□ -1.07
PKP4-207ENST00000457109 CXCR5P32302 372 aa8.37□□□□□ -1.07
PKP4-207ENST00000457109 AGTR2P50052 363 aa8.37□□□□□ -1.07
PKP4-207ENST00000457109 TNFSF10P50591 281 aa8.37□□□□□ -1.07
PKP4-207ENST00000457109 TAS2R50P59544 299 aa8.37□□□□□ -1.07
PKP4-207ENST00000457109 TAP2Q03519 686 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms