RNA–Protein interactions for RNA: ENST00000456013.5

PTPN6-204, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 1 (best) BASIC

Gene PTPN6, Length 2,389 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-204ENST00000456013 NEK5Q6P3R8 708 aa17.15■□□□□ 0.34
PTPN6-204ENST00000456013 ZNF621Q6ZSS3 439 aa17.15■□□□□ 0.34
PTPN6-204ENST00000456013 HJURPQ8NCD3 748 aaPredicted RBP17.15■□□□□ 0.34
PTPN6-204ENST00000456013 MCFD2Q8NI22 146 aa17.15■□□□□ 0.34
PTPN6-204ENST00000456013 HRASLS5Q96KN8 279 aa17.15■□□□□ 0.34
PTPN6-204ENST00000456013 ZDHHC3Q9NYG2 299 aa17.15■□□□□ 0.34
PTPN6-204ENST00000456013 SOCS5O75159 536 aa17.15■□□□□ 0.34
PTPN6-204ENST00000456013 C8GP07360 202 aa17.15■□□□□ 0.34
PTPN6-204ENST00000456013 AOAHP28039 575 aa17.15■□□□□ 0.34
PTPN6-204ENST00000456013 GKP32189 559 aa17.15■□□□□ 0.34
PTPN6-204ENST00000456013 ALDH7A1P49419 539 aaKnown RBP17.15■□□□□ 0.34
PTPN6-204ENST00000456013 HNMTP50135 292 aa17.15■□□□□ 0.34
PTPN6-204ENST00000456013 FPGSQ05932 587 aa17.15■□□□□ 0.34
PTPN6-204ENST00000456013 VEZF1Q14119 521 aa17.15■□□□□ 0.34
PTPN6-204ENST00000456013 PTCHD3Q3KNS1 767 aa17.15■□□□□ 0.34
PTPN6-204ENST00000456013 FRG2Q64ET8 278 aa17.15■□□□□ 0.34
PTPN6-204ENST00000456013 GPR26Q8NDV2 337 aa17.15■□□□□ 0.34
PTPN6-204ENST00000456013 UPF1Q92900 1129 aaKnown RBP eCLIP17.15■□□□□ 0.34
PTPN6-204ENST00000456013 FRG2BQ96QU4 278 aa17.15■□□□□ 0.34
PTPN6-204ENST00000456013 EPYCQ99645 322 aa17.15■□□□□ 0.34
PTPN6-204ENST00000456013 GABARAPL3Q9BY60 117 aa17.15■□□□□ 0.34
PTPN6-204ENST00000456013 DCSTAMPQ9H295 470 aa17.15■□□□□ 0.34
PTPN6-204ENST00000456013 MMP27Q9H306 513 aa17.15■□□□□ 0.34
PTPN6-204ENST00000456013 SP140LQ9H930 580 aa17.15■□□□□ 0.34
PTPN6-204ENST00000456013 SACM1LQ9NTJ5 587 aa17.15■□□□□ 0.34
PTPN6-204ENST00000456013 PNMA8BQ9ULN7 279 aaPredicted RBP17.15■□□□□ 0.34
PTPN6-204ENST00000456013 ISPDA4D126 451 aa17.14■□□□□ 0.33
PTPN6-204ENST00000456013 RPL17P18621 184 aaKnown RBP17.14■□□□□ 0.33
PTPN6-204ENST00000456013 MAPK8P45983 427 aa17.14■□□□□ 0.33
PTPN6-204ENST00000456013 CSNK1DP48730 415 aa17.14■□□□□ 0.33
PTPN6-204ENST00000456013 CDH18Q13634 790 aa17.14■□□□□ 0.33
PTPN6-204ENST00000456013 ARMC8Q8IUR7 673 aa17.14■□□□□ 0.33
PTPN6-204ENST00000456013 SYT12Q8IV01 421 aa17.14■□□□□ 0.33
PTPN6-204ENST00000456013 SYNPOQ8N3V7 929 aa17.14■□□□□ 0.33
PTPN6-204ENST00000456013 PSMA8Q8TAA3 256 aa17.14■□□□□ 0.33
PTPN6-204ENST00000456013 BCL7CQ8WUZ0 217 aaPredicted RBP17.14■□□□□ 0.33
PTPN6-204ENST00000456013 DNASE1L2Q92874 299 aa17.14■□□□□ 0.33
PTPN6-204ENST00000456013 EBPLQ9BY08 206 aa17.14■□□□□ 0.33
PTPN6-204ENST00000456013 FAM120CQ9NX05 1096 aaKnown RBP17.14■□□□□ 0.33
PTPN6-204ENST00000456013 ERVK-11Q9UQG0 969 aa17.14■□□□□ 0.33
PTPN6-204ENST00000456013 PCDHGA6Q9Y5G7 932 aa17.14■□□□□ 0.33
PTPN6-204ENST00000456013 A8MX80 341 aa17.14■□□□□ 0.33
PTPN6-204ENST00000456013 PRAMEF4O60810 478 aa17.14■□□□□ 0.33
PTPN6-204ENST00000456013 UPK1BO75841 260 aa17.14■□□□□ 0.33
PTPN6-204ENST00000456013 LATS1O95835 1130 aa17.14■□□□□ 0.33
PTPN6-204ENST00000456013 HIST1H2AGP0C0S8 130 aaPredicted RBP17.14■□□□□ 0.33
PTPN6-204ENST00000456013 HIST1H2ADP20671 130 aa17.14■□□□□ 0.33
PTPN6-204ENST00000456013 OR1D2P34982 312 aa17.14■□□□□ 0.33
PTPN6-204ENST00000456013 HOXD12P35452 270 aa17.14■□□□□ 0.33
PTPN6-204ENST00000456013 CLK1P49759 484 aaKnown RBP17.14■□□□□ 0.33
PTPN6-204ENST00000456013 ACLYP53396 1101 aa17.14■□□□□ 0.33
PTPN6-204ENST00000456013 MAPK11Q15759 364 aa17.14■□□□□ 0.33
PTPN6-204ENST00000456013 ZNF404Q494X3 552 aa17.14■□□□□ 0.33
PTPN6-204ENST00000456013 PRAMEF9Q5VWM5 478 aa17.14■□□□□ 0.33
PTPN6-204ENST00000456013 PDE12Q6L8Q7 609 aaKnown RBP17.14■□□□□ 0.33
PTPN6-204ENST00000456013 RETSATQ6NUM9 610 aa17.14■□□□□ 0.33
PTPN6-204ENST00000456013 TUBA3EQ6PEY2 450 aa17.14■□□□□ 0.33
PTPN6-204ENST00000456013 CYP2U1Q7Z449 544 aa17.14■□□□□ 0.33
PTPN6-204ENST00000456013 TSPAN33Q86UF1 283 aa17.14■□□□□ 0.33
PTPN6-204ENST00000456013 APCDD1Q8J025 514 aa17.14■□□□□ 0.33
PTPN6-204ENST00000456013 OR8J2Q8NGG1 315 aa17.14■□□□□ 0.33
PTPN6-204ENST00000456013 HIST1H2AHQ96KK5 128 aa17.14■□□□□ 0.33
PTPN6-204ENST00000456013 C7orf34Q96L11 122 aa17.14■□□□□ 0.33
PTPN6-204ENST00000456013 HIST1H2AJQ99878 128 aa17.14■□□□□ 0.33
PTPN6-204ENST00000456013 DPH2Q9BQC3 489 aaPredicted RBP17.14■□□□□ 0.33
PTPN6-204ENST00000456013 H2AFJQ9BTM1 129 aa17.14■□□□□ 0.33
PTPN6-204ENST00000456013 ABCG8Q9H221 673 aa17.14■□□□□ 0.33
PTPN6-204ENST00000456013 CPNE5Q9HCH3 593 aa17.14■□□□□ 0.33
PTPN6-204ENST00000456013 POLE4Q9NR33 117 aa17.14■□□□□ 0.33
PTPN6-204ENST00000456013 CA12O43570 354 aa17.13■□□□□ 0.33
PTPN6-204ENST00000456013 LIPAP38571 399 aa17.13■□□□□ 0.33
PTPN6-204ENST00000456013 B4GALNT1Q00973 533 aa17.13■□□□□ 0.33
PTPN6-204ENST00000456013 P3H2Q8IVL5 708 aa17.13■□□□□ 0.33
PTPN6-204ENST00000456013 SCAIQ8N9R8 606 aa17.13■□□□□ 0.33
PTPN6-204ENST00000456013 ASB11Q8WXH4 323 aa17.13■□□□□ 0.33
PTPN6-204ENST00000456013 MAGEB10Q96LZ2 347 aaPredicted RBP17.13■□□□□ 0.33
PTPN6-204ENST00000456013 LYSMD1Q96S90 227 aa17.13■□□□□ 0.33
PTPN6-204ENST00000456013 COPS8Q99627 209 aa17.13■□□□□ 0.33
PTPN6-204ENST00000456013 TMEM175Q9BSA9 504 aa17.13■□□□□ 0.33
PTPN6-204ENST00000456013 C2orf49Q9BVC5 232 aaPredicted RBP17.13■□□□□ 0.33
PTPN6-204ENST00000456013 KLHL25Q9H0H3 589 aa17.13■□□□□ 0.33
PTPN6-204ENST00000456013 PLCXD1Q9NUJ7 323 aa17.13■□□□□ 0.33
PTPN6-204ENST00000456013 KIAA1522Q9P206 1035 aaPredicted RBP17.13■□□□□ 0.33
PTPN6-204ENST00000456013 RNF6Q9Y252 685 aa17.13■□□□□ 0.33
PTPN6-204ENST00000456013 METTL15A6NJ78 407 aa17.13■□□□□ 0.33
PTPN6-204ENST00000456013 TAF4O00268 1085 aa17.13■□□□□ 0.33
PTPN6-204ENST00000456013 AIREO43918 545 aa17.13■□□□□ 0.33
PTPN6-204ENST00000456013 CPSF4O95639 269 aaKnown RBP17.13■□□□□ 0.33
PTPN6-204ENST00000456013 COX7A2P14406 83 aa17.13■□□□□ 0.33
PTPN6-204ENST00000456013 JUPP14923 745 aa17.13■□□□□ 0.33
PTPN6-204ENST00000456013 ELP6Q0PNE2 266 aa17.13■□□□□ 0.33
PTPN6-204ENST00000456013 SYT16Q17RD7 645 aa17.13■□□□□ 0.33
PTPN6-204ENST00000456013 ZSWIM9Q86XI8 627 aa17.13■□□□□ 0.33
PTPN6-204ENST00000456013 LYSMD2Q8IV50 215 aa17.13■□□□□ 0.33
PTPN6-204ENST00000456013 ERLEC1Q96DZ1 483 aa17.13■□□□□ 0.33
PTPN6-204ENST00000456013 COPS4Q9BT78 406 aa17.13■□□□□ 0.33
PTPN6-204ENST00000456013 SPATA9Q9BWV2 254 aa17.13■□□□□ 0.33
PTPN6-204ENST00000456013 DNAJC11Q9NVH1 559 aa17.13■□□□□ 0.33
PTPN6-204ENST00000456013 ZNF229Q9UJW7 825 aa17.13■□□□□ 0.33
PTPN6-204ENST00000456013 SLC22A14Q9Y267 594 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms