RNA–Protein interactions for RNA: ENST00000455343.5

RBM39-220, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 441 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-220ENST00000455343 H3BMH7 237 aa3.56□□□□□ -1.84
RBM39-220ENST00000455343 C19orf84I3L1E1 186 aa3.56□□□□□ -1.84
RBM39-220ENST00000455343 PCDH17O14917 1159 aa3.56□□□□□ -1.84
RBM39-220ENST00000455343 KCNN4O15554 427 aa3.56□□□□□ -1.84
RBM39-220ENST00000455343 CCP110O43303 1012 aa3.56□□□□□ -1.84
RBM39-220ENST00000455343 VEGFDO43915 354 aa3.56□□□□□ -1.84
RBM39-220ENST00000455343 JRKO75564 520 aa3.56□□□□□ -1.84
RBM39-220ENST00000455343 SPDEFO95238 335 aa3.56□□□□□ -1.84
RBM39-220ENST00000455343 ZBTB11O95625 1053 aaPredicted RBP3.56□□□□□ -1.84
RBM39-220ENST00000455343 GASTP01350 101 aa3.56□□□□□ -1.84
RBM39-220ENST00000455343 TRBC1P01850 177 aa3.56□□□□□ -1.84
RBM39-220ENST00000455343 IGHEP01854 428 aa3.56□□□□□ -1.84
RBM39-220ENST00000455343 EBLN1P0CF75 366 aa3.56□□□□□ -1.84
RBM39-220ENST00000455343 GOLGA6DP0CG33 693 aa3.56□□□□□ -1.84
RBM39-220ENST00000455343 EGR2P11161 476 aaPredicted RBP3.56□□□□□ -1.84
RBM39-220ENST00000455343 KRT3P12035 628 aa3.56□□□□□ -1.84
RBM39-220ENST00000455343 COX6B1P14854 86 aa3.56□□□□□ -1.84
RBM39-220ENST00000455343 ZNF8P17098 575 aaPredicted RBP3.56□□□□□ -1.84
RBM39-220ENST00000455343 CTPS1P17812 591 aa3.56□□□□□ -1.84
RBM39-220ENST00000455343 ERCC2P18074 760 aa3.56□□□□□ -1.84
RBM39-220ENST00000455343 AGAP20933 346 aa3.56□□□□□ -1.84
RBM39-220ENST00000455343 GPD1P21695 349 aa3.56□□□□□ -1.84
RBM39-220ENST00000455343 SPINT3P49223 89 aa3.56□□□□□ -1.84
RBM39-220ENST00000455343 LGALS4P56470 323 aa3.56□□□□□ -1.84
RBM39-220ENST00000455343 KRT85P78386 507 aa3.56□□□□□ -1.84
RBM39-220ENST00000455343 FMO1Q01740 532 aa3.56□□□□□ -1.84
RBM39-220ENST00000455343 FOXI1Q12951 378 aa3.56□□□□□ -1.84
RBM39-220ENST00000455343 ABRQ12979 859 aa3.56□□□□□ -1.84
RBM39-220ENST00000455343 STIM1Q13586 685 aa3.56□□□□□ -1.84
RBM39-220ENST00000455343 CA9Q16790 459 aa3.56□□□□□ -1.84
RBM39-220ENST00000455343 MST1LQ2TV78 715 aa3.56□□□□□ -1.84
RBM39-220ENST00000455343 VWA2Q5GFL6 755 aa3.56□□□□□ -1.84
RBM39-220ENST00000455343 CT83Q5H943 113 aa3.56□□□□□ -1.84
RBM39-220ENST00000455343 ARMC12Q5T9G4 340 aa3.56□□□□□ -1.84
RBM39-220ENST00000455343 ABHD17BQ5VST6 288 aa3.56□□□□□ -1.84
RBM39-220ENST00000455343 KLHDC7AQ5VTJ3 777 aa3.56□□□□□ -1.84
RBM39-220ENST00000455343 TAF3Q5VWG9 929 aa3.56□□□□□ -1.84
RBM39-220ENST00000455343 NAA35Q5VZE5 725 aa3.56□□□□□ -1.84
RBM39-220ENST00000455343 FCRL6Q6DN72 434 aa3.56□□□□□ -1.84
RBM39-220ENST00000455343 IRGCQ6NXR0 463 aa3.56□□□□□ -1.84
RBM39-220ENST00000455343 XKRXQ6PP77 449 aa3.56□□□□□ -1.84
RBM39-220ENST00000455343 TRIM72Q6ZMU5 477 aa3.56□□□□□ -1.84
RBM39-220ENST00000455343 USP45Q70EL2 814 aa3.56□□□□□ -1.84
RBM39-220ENST00000455343 C11orf96Q7Z7L8 435 aa3.56□□□□□ -1.84
RBM39-220ENST00000455343 ZNF677Q86XU0 584 aa3.56□□□□□ -1.84
RBM39-220ENST00000455343 RAB43Q86YS6 212 aa3.56□□□□□ -1.84
RBM39-220ENST00000455343 TMEM126BQ8IUX1 230 aa3.56□□□□□ -1.84
RBM39-220ENST00000455343 ZNF547Q8IVP9 402 aa3.56□□□□□ -1.84
RBM39-220ENST00000455343 SYTL1Q8IYJ3 562 aa3.56□□□□□ -1.84
RBM39-220ENST00000455343 TEX26Q8N6G2 289 aa3.56□□□□□ -1.84
RBM39-220ENST00000455343 NPWQ8N729 165 aa3.56□□□□□ -1.84
RBM39-220ENST00000455343 CLEC1AQ8NC01 280 aa3.56□□□□□ -1.84
RBM39-220ENST00000455343 MSANTD4Q8NCY6 345 aa3.56□□□□□ -1.84
RBM39-220ENST00000455343 C3orf20Q8ND61 904 aa3.56□□□□□ -1.84
RBM39-220ENST00000455343 ZFP28Q8NHY6 868 aa3.56□□□□□ -1.84
RBM39-220ENST00000455343 NELFBQ8WX92 580 aa3.56□□□□□ -1.84
RBM39-220ENST00000455343 CPT1BQ92523 772 aa3.56□□□□□ -1.84
RBM39-220ENST00000455343 SMARCE1Q969G3 411 aa3.56□□□□□ -1.84
RBM39-220ENST00000455343 CAVIN3Q969G5 261 aa3.56□□□□□ -1.84
RBM39-220ENST00000455343 NACC2Q96BF6 587 aa3.56□□□□□ -1.84
RBM39-220ENST00000455343 EID2BQ96D98 161 aa3.56□□□□□ -1.84
RBM39-220ENST00000455343 TIGD1Q96MW7 591 aa3.56□□□□□ -1.84
RBM39-220ENST00000455343 CD180Q99467 661 aa3.56□□□□□ -1.84
RBM39-220ENST00000455343 EIF3CQ99613 913 aaKnown RBP3.56□□□□□ -1.84
RBM39-220ENST00000455343 TIMM29Q9BSF4 260 aa3.56□□□□□ -1.84
RBM39-220ENST00000455343 MLPHQ9BV36 600 aaPredicted RBP3.56□□□□□ -1.84
RBM39-220ENST00000455343 CXXC4Q9H2H0 198 aa3.56□□□□□ -1.84
RBM39-220ENST00000455343 PDCL3Q9H2J4 239 aa3.56□□□□□ -1.84
RBM39-220ENST00000455343 MCCC2Q9HCC0 563 aa3.56□□□□□ -1.84
RBM39-220ENST00000455343 KLC4Q9NSK0 619 aa3.56□□□□□ -1.84
RBM39-220ENST00000455343 GOLGA6AQ9NYA3 693 aa3.56□□□□□ -1.84
RBM39-220ENST00000455343 NOCTQ9UK39 431 aaKnown RBP3.56□□□□□ -1.84
RBM39-220ENST00000455343 MAN1B1Q9UKM7 699 aa3.56□□□□□ -1.84
RBM39-220ENST00000455343 WDR37Q9Y2I8 494 aa3.56□□□□□ -1.84
RBM39-220ENST00000455343 COX11Q9Y6N1 276 aa3.56□□□□□ -1.84
RBM39-220ENST00000455343 MED13LQ71F56 2210 aa3.56□□□□□ -1.84
RBM39-220ENST00000455343 FAM170AA1A519 330 aa3.55□□□□□ -1.84
RBM39-220ENST00000455343 CCDC78A2IDD5 438 aa3.55□□□□□ -1.84
RBM39-220ENST00000455343 PDZK1P1A8MUH7 402 aa3.55□□□□□ -1.84
RBM39-220ENST00000455343 CXorf49A8MYA2 514 aaPredicted RBP3.55□□□□□ -1.84
RBM39-220ENST00000455343 KMOO15229 486 aa3.55□□□□□ -1.84
RBM39-220ENST00000455343 PJA2O43164 708 aa3.55□□□□□ -1.84
RBM39-220ENST00000455343 CNOT3O75175 753 aaKnown RBP3.55□□□□□ -1.84
RBM39-220ENST00000455343 CLDN7O95471 211 aa3.55□□□□□ -1.84
RBM39-220ENST00000455343 CD99P14209 185 aa3.55□□□□□ -1.84
RBM39-220ENST00000455343 UCHL3P15374 230 aa3.55□□□□□ -1.84
RBM39-220ENST00000455343 ZNF7P17097 686 aaPredicted RBP3.55□□□□□ -1.84
RBM39-220ENST00000455343 CHRNB2P17787 502 aa3.55□□□□□ -1.84
RBM39-220ENST00000455343 IL4RP24394 825 aa3.55□□□□□ -1.84
RBM39-220ENST00000455343 LMO1P25800 156 aa3.55□□□□□ -1.84
RBM39-220ENST00000455343 PBX1P40424 430 aa3.55□□□□□ -1.84
RBM39-220ENST00000455343 CA7P43166 264 aa3.55□□□□□ -1.84
RBM39-220ENST00000455343 ARCN1P48444 511 aaKnown RBP3.55□□□□□ -1.84
RBM39-220ENST00000455343 HCAR3P49019 387 aa3.55□□□□□ -1.84
RBM39-220ENST00000455343 CHN2P52757 468 aa3.55□□□□□ -1.84
RBM39-220ENST00000455343 STX17P56962 302 aa3.55□□□□□ -1.84
RBM39-220ENST00000455343 KCNK10P57789 538 aa3.55□□□□□ -1.84
RBM39-220ENST00000455343 TPI1P60174 286 aa3.55□□□□□ -1.84
RBM39-220ENST00000455343 MAXP61244 160 aa3.55□□□□□ -1.84
RBM39-220ENST00000455343 RPL7AP62424 266 aaKnown RBP3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms