RNA–Protein interactions for RNA: ENST00000454830.6

CLK3-203, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 3,787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-203ENST00000454830 TMED5Q9Y3A6 229 aa13.2□□□□□ -0.3
CLK3-203ENST00000454830 XIRP2A4UGR9 3374 aa13.2□□□□□ -0.3
CLK3-203ENST00000454830 SOCS2O14508 198 aa13.19□□□□□ -0.3
CLK3-203ENST00000454830 E2F6O75461 281 aa13.19□□□□□ -0.3
CLK3-203ENST00000454830 KLF8O95600 359 aaPredicted RBP13.19□□□□□ -0.3
CLK3-203ENST00000454830 PRPS1L1P21108 318 aa13.19□□□□□ -0.3
CLK3-203ENST00000454830 C5AR1P21730 350 aa13.19□□□□□ -0.3
CLK3-203ENST00000454830 TAP2Q03519 686 aa13.19□□□□□ -0.3
CLK3-203ENST00000454830 FOXD4Q12950 439 aaPredicted RBP13.19□□□□□ -0.3
CLK3-203ENST00000454830 TMEM31Q5JXX7 168 aa13.19□□□□□ -0.3
CLK3-203ENST00000454830 TMEM214Q6NUQ4 689 aaKnown RBP13.19□□□□□ -0.3
CLK3-203ENST00000454830 HOMEZQ8IX15 550 aa13.19□□□□□ -0.3
CLK3-203ENST00000454830 CLECL1Q8IZS7 167 aa13.19□□□□□ -0.3
CLK3-203ENST00000454830 PGBD3Q8N328 593 aa13.19□□□□□ -0.3
CLK3-203ENST00000454830 SLC5A11Q8WWX8 675 aa13.19□□□□□ -0.3
CLK3-203ENST00000454830 PRPF18Q99633 342 aaKnown RBP13.19□□□□□ -0.3
CLK3-203ENST00000454830 EPHX3Q9H6B9 360 aa13.19□□□□□ -0.3
CLK3-203ENST00000454830 SLC25A37Q9NYZ2 338 aa13.19□□□□□ -0.3
CLK3-203ENST00000454830 PCDH7O60245 1069 aa13.19□□□□□ -0.3
CLK3-203ENST00000454830 ADH1BP00325 375 aa13.19□□□□□ -0.3
CLK3-203ENST00000454830 NPPBP16860 134 aa13.19□□□□□ -0.3
CLK3-203ENST00000454830 HRH2P25021 359 aa13.19□□□□□ -0.3
CLK3-203ENST00000454830 TAS2R38P59533 333 aa13.19□□□□□ -0.3
CLK3-203ENST00000454830 CSTF3Q12996 717 aaKnown RBP13.19□□□□□ -0.3
CLK3-203ENST00000454830 CPTPQ5TA50 214 aa13.19□□□□□ -0.3
CLK3-203ENST00000454830 CLEC4FQ8N1N0 589 aa13.19□□□□□ -0.3
CLK3-203ENST00000454830 OR8J3Q8NGG0 315 aa13.19□□□□□ -0.3
CLK3-203ENST00000454830 ZNF583Q96ND8 569 aa13.19□□□□□ -0.3
CLK3-203ENST00000454830 XKR8Q9H6D3 395 aa13.19□□□□□ -0.3
CLK3-203ENST00000454830 CAAP1Q9H8G2 361 aa13.19□□□□□ -0.3
CLK3-203ENST00000454830 GPR34Q9UPC5 381 aa13.19□□□□□ -0.3
CLK3-203ENST00000454830 H3BQ06 376 aaPredicted RBP13.19□□□□□ -0.3
CLK3-203ENST00000454830 CXCR6O00574 342 aa13.19□□□□□ -0.3
CLK3-203ENST00000454830 ERN1O75460 977 aaKnown RBP13.19□□□□□ -0.3
CLK3-203ENST00000454830 ACADMP11310 421 aa13.19□□□□□ -0.3
CLK3-203ENST00000454830 FCGR1AP12314 374 aa13.19□□□□□ -0.3
CLK3-203ENST00000454830 KELP23276 732 aa13.19□□□□□ -0.3
CLK3-203ENST00000454830 SLCO4C1Q6ZQN7 724 aa13.19□□□□□ -0.3
CLK3-203ENST00000454830 C11orf96Q7Z7L8 435 aa13.19□□□□□ -0.3
CLK3-203ENST00000454830 C17orf64Q86WR6 236 aa13.19□□□□□ -0.3
CLK3-203ENST00000454830 VPS37AQ8NEZ2 397 aa13.19□□□□□ -0.3
CLK3-203ENST00000454830 TNIP2Q8NFZ5 429 aa13.19□□□□□ -0.3
CLK3-203ENST00000454830 ELSPBP1Q96BH3 223 aa13.19□□□□□ -0.3
CLK3-203ENST00000454830 CENPNQ96H22 339 aaPredicted RBP13.19□□□□□ -0.3
CLK3-203ENST00000454830 ZDHHC5Q9C0B5 715 aa13.19□□□□□ -0.3
CLK3-203ENST00000454830 MUC13Q9H3R2 512 aa13.19□□□□□ -0.3
CLK3-203ENST00000454830 RAB26Q9ULW5 256 aa13.19□□□□□ -0.3
CLK3-203ENST00000454830 PCDHGB4Q9UN71 923 aa13.19□□□□□ -0.3
CLK3-203ENST00000454830 PCDHB3Q9Y5E6 796 aa13.19□□□□□ -0.3
CLK3-203ENST00000454830 C7orf72A4D263 438 aa13.18□□□□□ -0.3
CLK3-203ENST00000454830 PI15O43692 258 aa13.18□□□□□ -0.3
CLK3-203ENST00000454830 SH3BP5O60239 455 aa13.18□□□□□ -0.3
CLK3-203ENST00000454830 EPN2O95208 641 aa13.18□□□□□ -0.3
CLK3-203ENST00000454830 PAPLNO95428 1278 aa13.18□□□□□ -0.3
CLK3-203ENST00000454830 C1GALT1C1LP0DN25 315 aa13.18□□□□□ -0.3
CLK3-203ENST00000454830 LAMP1P11279 417 aa13.18□□□□□ -0.3
CLK3-203ENST00000454830 IL1RL1Q01638 556 aa13.18□□□□□ -0.3
CLK3-203ENST00000454830 SMU1Q2TAY7 513 aa13.18□□□□□ -0.3
CLK3-203ENST00000454830 TBC1D21Q8IYX1 336 aa13.18□□□□□ -0.3
CLK3-203ENST00000454830 SDCCAG3Q96C92 435 aa13.18□□□□□ -0.3
CLK3-203ENST00000454830 PDP2Q9P2J9 529 aa13.18□□□□□ -0.3
CLK3-203ENST00000454830 PCDHGB5Q9Y5G0 923 aa13.18□□□□□ -0.3
CLK3-203ENST00000454830 TRIOBPQ9H2D6 2365 aa13.18□□□□□ -0.3
CLK3-203ENST00000454830 TRBV23OR9-2A0A075B6M9 112 aa13.18□□□□□ -0.3
CLK3-203ENST00000454830 PIPSLA2A3N6 862 aa13.18□□□□□ -0.3
CLK3-203ENST00000454830 LILRB5O75023 590 aa13.18□□□□□ -0.3
CLK3-203ENST00000454830 STATHP02808 62 aa13.18□□□□□ -0.3
CLK3-203ENST00000454830 NTSR1P30989 418 aa13.18□□□□□ -0.3
CLK3-203ENST00000454830 MRPL19P49406 292 aaKnown RBP13.18□□□□□ -0.3
CLK3-203ENST00000454830 CYP2A13Q16696 494 aa13.18□□□□□ -0.3
CLK3-203ENST00000454830 STK32CQ86UX6 486 aa13.18□□□□□ -0.3
CLK3-203ENST00000454830 PLD3Q8IV08 490 aa13.18□□□□□ -0.3
CLK3-203ENST00000454830 DCUN1D3Q8IWE4 304 aa13.18□□□□□ -0.3
CLK3-203ENST00000454830 C9orf16Q9BUW7 83 aa13.18□□□□□ -0.3
CLK3-203ENST00000454830 EFCAB11Q9BUY7 163 aa13.18□□□□□ -0.3
CLK3-203ENST00000454830 DUSP26Q9BV47 211 aa13.18□□□□□ -0.3
CLK3-203ENST00000454830 RSPH9Q9H1X1 276 aaPredicted RBP13.18□□□□□ -0.3
CLK3-203ENST00000454830 ARMC1Q9NVT9 282 aa13.18□□□□□ -0.3
CLK3-203ENST00000454830 ANKDD1BA6NHY2 528 aa13.18□□□□□ -0.3
CLK3-203ENST00000454830 EI24O14681 340 aa13.18□□□□□ -0.3
CLK3-203ENST00000454830 NPC1O15118 1278 aa13.18□□□□□ -0.3
CLK3-203ENST00000454830 UGDHO60701 494 aa13.18□□□□□ -0.3
CLK3-203ENST00000454830 FAM58BPP0C7Q3 252 aa13.18□□□□□ -0.3
CLK3-203ENST00000454830 ZNF26P17031 533 aaPredicted RBP13.18□□□□□ -0.3
CLK3-203ENST00000454830 PSMB5P28074 263 aa13.18□□□□□ -0.3
CLK3-203ENST00000454830 VAC14Q08AM6 782 aa13.18□□□□□ -0.3
CLK3-203ENST00000454830 ZIK1Q3SY52 487 aaPredicted RBP13.18□□□□□ -0.3
CLK3-203ENST00000454830 FAM180BQ6P0A1 224 aa13.18□□□□□ -0.3
CLK3-203ENST00000454830 GALNT10Q86SR1 603 aa13.18□□□□□ -0.3
CLK3-203ENST00000454830 TMEM126BQ8IUX1 230 aa13.18□□□□□ -0.3
CLK3-203ENST00000454830 KIAA1958Q8N8K9 716 aa13.18□□□□□ -0.3
CLK3-203ENST00000454830 OR4K1Q8NGD4 311 aa13.18□□□□□ -0.3
CLK3-203ENST00000454830 WDR20Q8TBZ3 569 aa13.18□□□□□ -0.3
CLK3-203ENST00000454830 BDH2Q9BUT1 245 aa13.18□□□□□ -0.3
CLK3-203ENST00000454830 KCNH6Q9H252 994 aa13.18□□□□□ -0.3
CLK3-203ENST00000454830 TMEM45AQ9NWC5 275 aa13.18□□□□□ -0.3
CLK3-203ENST00000454830 GEMIN8Q9NWZ8 242 aaKnown RBP13.18□□□□□ -0.3
CLK3-203ENST00000454830 PLEKHM1Q9Y4G2 1056 aa13.18□□□□□ -0.3
CLK3-203ENST00000454830 ZNF106Q9H2Y7 1883 aaKnown RBP13.17□□□□□ -0.3
CLK3-203ENST00000454830 PRKD3O94806 890 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms