RNA–Protein interactions for RNA: ENST00000454612.6

DDR1-240, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene DDR1, Length 3,942 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-240ENST00000454612 SHMT2P34897 504 aa10.84□□□□□ -0.67
DDR1-240ENST00000454612 PTGS2P35354 604 aa10.84□□□□□ -0.67
DDR1-240ENST00000454612 MASP1P48740 699 aa10.84□□□□□ -0.67
DDR1-240ENST00000454612 NPTX1Q15818 432 aa10.84□□□□□ -0.67
DDR1-240ENST00000454612 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.84□□□□□ -0.67
DDR1-240ENST00000454612 STARD8Q92502 1023 aa10.84□□□□□ -0.67
DDR1-240ENST00000454612 ZHX1-C8orf76Q96EF9 292 aa10.84□□□□□ -0.67
DDR1-240ENST00000454612 ARPC5LQ9BPX5 153 aa10.84□□□□□ -0.67
DDR1-240ENST00000454612 MCMBPQ9BTE3 642 aa10.84□□□□□ -0.67
DDR1-240ENST00000454612 SORBS1Q9BX66 1292 aaKnown RBP10.84□□□□□ -0.67
DDR1-240ENST00000454612 EMILIN2Q9BXX0 1053 aa10.84□□□□□ -0.67
DDR1-240ENST00000454612 ERVK-18Q9QC07 812 aa10.84□□□□□ -0.67
DDR1-240ENST00000454612 TET1Q8NFU7 2136 aa10.84□□□□□ -0.67
DDR1-240ENST00000454612 WDR87Q6ZQQ6 2873 aa10.84□□□□□ -0.67
DDR1-240ENST00000454612 E2F3O00716 465 aa10.84□□□□□ -0.67
DDR1-240ENST00000454612 EIF2S1P05198 315 aaKnown RBP10.84□□□□□ -0.67
DDR1-240ENST00000454612 KLK1P06870 262 aa10.84□□□□□ -0.67
DDR1-240ENST00000454612 HMGCLP35914 325 aa10.84□□□□□ -0.67
DDR1-240ENST00000454612 POLR2LP62875 67 aaKnown RBP10.84□□□□□ -0.67
DDR1-240ENST00000454612 MC1RQ01726 317 aa10.84□□□□□ -0.67
DDR1-240ENST00000454612 CNTN1Q12860 1018 aa10.84□□□□□ -0.67
DDR1-240ENST00000454612 RFTN1Q14699 578 aaPredicted RBP10.84□□□□□ -0.67
DDR1-240ENST00000454612 MPPE1Q53F39 396 aa10.84□□□□□ -0.67
DDR1-240ENST00000454612 PGBD3Q8N328 593 aa10.84□□□□□ -0.67
DDR1-240ENST00000454612 RHEBL1Q8TAI7 183 aa10.84□□□□□ -0.67
DDR1-240ENST00000454612 MYRFLQ96LU7 910 aa10.84□□□□□ -0.67
DDR1-240ENST00000454612 C11orf16Q9NQ32 467 aa10.84□□□□□ -0.67
DDR1-240ENST00000454612 ZNF225Q9UK10 706 aa10.84□□□□□ -0.67
DDR1-240ENST00000454612 M0QX08 132 aa10.84□□□□□ -0.67
DDR1-240ENST00000454612 SLC22A2O15244 555 aa10.84□□□□□ -0.67
DDR1-240ENST00000454612 MMP20O60882 483 aa10.84□□□□□ -0.67
DDR1-240ENST00000454612 TYRP14679 529 aa10.84□□□□□ -0.67
DDR1-240ENST00000454612 TCF3P15923 654 aa10.84□□□□□ -0.67
DDR1-240ENST00000454612 CA5AP35218 305 aa10.84□□□□□ -0.67
DDR1-240ENST00000454612 IL12RB1P42701 662 aa10.84□□□□□ -0.67
DDR1-240ENST00000454612 CTSKP43235 329 aa10.84□□□□□ -0.67
DDR1-240ENST00000454612 EMX2Q04743 252 aa10.84□□□□□ -0.67
DDR1-240ENST00000454612 CCSMST1Q4G0I0 132 aa10.84□□□□□ -0.67
DDR1-240ENST00000454612 ARHGAP15Q53QZ3 475 aa10.84□□□□□ -0.67
DDR1-240ENST00000454612 FRG2Q64ET8 278 aa10.84□□□□□ -0.67
DDR1-240ENST00000454612 GRASPQ7Z6J2 395 aaPredicted RBP10.84□□□□□ -0.67
DDR1-240ENST00000454612 MINDY1Q8N5J2 469 aa10.84□□□□□ -0.67
DDR1-240ENST00000454612 FRG2BQ96QU4 278 aa10.84□□□□□ -0.67
DDR1-240ENST00000454612 ADPRHL2Q9NX46 363 aa10.84□□□□□ -0.67
DDR1-240ENST00000454612 ELOVL2Q9NXB9 296 aa10.84□□□□□ -0.67
DDR1-240ENST00000454612 PCDHGA8Q9Y5G5 932 aa10.84□□□□□ -0.67
DDR1-240ENST00000454612 ZNF236Q9UL36 1845 aa10.84□□□□□ -0.67
DDR1-240ENST00000454612 LOC100130705A0A1B0GUX0 176 aa10.83□□□□□ -0.68
DDR1-240ENST00000454612 A0A1W2PQ72 361 aa10.83□□□□□ -0.68
DDR1-240ENST00000454612 AP1G1O43747 822 aa10.83□□□□□ -0.68
DDR1-240ENST00000454612 OR10H3O60404 316 aa10.83□□□□□ -0.68
DDR1-240ENST00000454612 IGLV3-25P01717 112 aa10.83□□□□□ -0.68
DDR1-240ENST00000454612 CDH1P12830 882 aa10.83□□□□□ -0.68
DDR1-240ENST00000454612 MAGEA11P43364 429 aa10.83□□□□□ -0.68
DDR1-240ENST00000454612 CCT3P49368 545 aaKnown RBP10.83□□□□□ -0.68
DDR1-240ENST00000454612 AP1S1P61966 158 aa10.83□□□□□ -0.68
DDR1-240ENST00000454612 RPS13P62277 151 aaKnown RBP10.83□□□□□ -0.68
DDR1-240ENST00000454612 DSC1Q08554 894 aa10.83□□□□□ -0.68
DDR1-240ENST00000454612 MGAT3Q09327 533 aa10.83□□□□□ -0.68
DDR1-240ENST00000454612 PON2Q15165 354 aa10.83□□□□□ -0.68
DDR1-240ENST00000454612 ZBED5Q49AG3 693 aa10.83□□□□□ -0.68
DDR1-240ENST00000454612 PYCR3Q53H96 274 aa10.83□□□□□ -0.68
DDR1-240ENST00000454612 NIPAL1Q6NVV3 410 aa10.83□□□□□ -0.68
DDR1-240ENST00000454612 NCEH1Q6PIU2 408 aa10.83□□□□□ -0.68
DDR1-240ENST00000454612 CRTC1Q6UUV9 634 aa10.83□□□□□ -0.68
DDR1-240ENST00000454612 TFAP2CQ92754 450 aa10.83□□□□□ -0.68
DDR1-240ENST00000454612 TMEM203Q969S6 136 aa10.83□□□□□ -0.68
DDR1-240ENST00000454612 SLC32A1Q9H598 525 aa10.83□□□□□ -0.68
DDR1-240ENST00000454612 FZD4Q9ULV1 537 aa10.83□□□□□ -0.68
DDR1-240ENST00000454612 CEPT1Q9Y6K0 416 aa10.83□□□□□ -0.68
DDR1-240ENST00000454612 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.83□□□□□ -0.68
DDR1-240ENST00000454612 TCRBV3S1A0A5B6 114 aa10.83□□□□□ -0.68
DDR1-240ENST00000454612 CLDN25C9JDP6 229 aa10.83□□□□□ -0.68
DDR1-240ENST00000454612 FXYD1O00168 92 aa10.83□□□□□ -0.68
DDR1-240ENST00000454612 LEFTY2O00292 366 aa10.83□□□□□ -0.68
DDR1-240ENST00000454612 RPLP2P05387 115 aaKnown RBP10.83□□□□□ -0.68
DDR1-240ENST00000454612 LAMP1P11279 417 aa10.83□□□□□ -0.68
DDR1-240ENST00000454612 PFKLP17858 780 aa10.83□□□□□ -0.68
DDR1-240ENST00000454612 CCR7P32248 378 aa10.83□□□□□ -0.68
DDR1-240ENST00000454612 TTKP33981 857 aa10.83□□□□□ -0.68
DDR1-240ENST00000454612 RCVRNP35243 200 aa10.83□□□□□ -0.68
DDR1-240ENST00000454612 CDKN2CP42773 168 aa10.83□□□□□ -0.68
DDR1-240ENST00000454612 CDK9P50750 372 aaKnown RBP10.83□□□□□ -0.68
DDR1-240ENST00000454612 EEFSECP57772 596 aaKnown RBP10.83□□□□□ -0.68
DDR1-240ENST00000454612 TUBA4AP68366 448 aa10.83□□□□□ -0.68
DDR1-240ENST00000454612 CD47Q08722 323 aa10.83□□□□□ -0.68
DDR1-240ENST00000454612 ZNF846Q147U1 533 aa10.83□□□□□ -0.68
DDR1-240ENST00000454612 ZNF605Q86T29 641 aa10.83□□□□□ -0.68
DDR1-240ENST00000454612 EPHX4Q8IUS5 362 aa10.83□□□□□ -0.68
DDR1-240ENST00000454612 MMAAQ8IVH4 418 aaKnown RBP10.83□□□□□ -0.68
DDR1-240ENST00000454612 CHERPQ8IWX8 916 aaKnown RBP10.83□□□□□ -0.68
DDR1-240ENST00000454612 GPR65Q8IYL9 337 aa10.83□□□□□ -0.68
DDR1-240ENST00000454612 ISL2Q96A47 359 aa10.83□□□□□ -0.68
DDR1-240ENST00000454612 PLD4Q96BZ4 506 aa10.83□□□□□ -0.68
DDR1-240ENST00000454612 CLIP3Q96DZ5 547 aa10.83□□□□□ -0.68
DDR1-240ENST00000454612 ZNF382Q96SR6 550 aa10.83□□□□□ -0.68
DDR1-240ENST00000454612 SLX1AQ9BQ83 275 aa10.83□□□□□ -0.68
DDR1-240ENST00000454612 TPRKBQ9Y3C4 175 aa10.83□□□□□ -0.68
DDR1-240ENST00000454612 CABIN1Q9Y6J0 2220 aa10.83□□□□□ -0.68
DDR1-240ENST00000454612 PDHA2P29803 388 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms