RNA–Protein interactions for RNA: ENST00000453386.6

TRA2B-205, Transcript of transformer 2 beta homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRA2B, Length 2,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-205ENST00000453386 NXPE1Q8N323 547 aa15.24■□□□□ 0.03
TRA2B-205ENST00000453386 AMER2Q8N7J2 671 aa15.24■□□□□ 0.03
TRA2B-205ENST00000453386 TRIB2Q92519 343 aa15.24■□□□□ 0.03
TRA2B-205ENST00000453386 HIST1H2AHQ96KK5 128 aa15.24■□□□□ 0.03
TRA2B-205ENST00000453386 HIST1H2AJQ99878 128 aa15.24■□□□□ 0.03
TRA2B-205ENST00000453386 H2AFJQ9BTM1 129 aa15.24■□□□□ 0.03
TRA2B-205ENST00000453386 SIAEQ9HAT2 523 aa15.24■□□□□ 0.03
TRA2B-205ENST00000453386 ITM2CQ9NQX7 267 aa15.24■□□□□ 0.03
TRA2B-205ENST00000453386 KCTD5Q9NXV2 234 aa15.24■□□□□ 0.03
TRA2B-205ENST00000453386 SLC22A14Q9Y267 594 aa15.24■□□□□ 0.03
TRA2B-205ENST00000453386 ADAM12O43184 909 aa15.24■□□□□ 0.03
TRA2B-205ENST00000453386 NUDT7P0C024 238 aa15.24■□□□□ 0.03
TRA2B-205ENST00000453386 ALOX12P18054 663 aa15.24■□□□□ 0.03
TRA2B-205ENST00000453386 PRPS1L1P21108 318 aa15.24■□□□□ 0.03
TRA2B-205ENST00000453386 S100A5P33763 92 aa15.24■□□□□ 0.03
TRA2B-205ENST00000453386 IDH2P48735 452 aaKnown RBP15.24■□□□□ 0.03
TRA2B-205ENST00000453386 NUDT6P53370 316 aa15.24■□□□□ 0.03
TRA2B-205ENST00000453386 DDX39BQ13838 428 aaKnown RBP15.24■□□□□ 0.03
TRA2B-205ENST00000453386 BCL2A1Q16548 175 aa15.24■□□□□ 0.03
TRA2B-205ENST00000453386 TRIM71Q2Q1W2 868 aaKnown RBP15.24■□□□□ 0.03
TRA2B-205ENST00000453386 ZXDCQ2QGD7 858 aaPredicted RBP15.24■□□□□ 0.03
TRA2B-205ENST00000453386 SOWAHCQ53LP3 525 aaPredicted RBP15.24■□□□□ 0.03
TRA2B-205ENST00000453386 DEPDC1Q5TB30 811 aa15.24■□□□□ 0.03
TRA2B-205ENST00000453386 FAHD1Q6P587 224 aa15.24■□□□□ 0.03
TRA2B-205ENST00000453386 ERICH5Q6P6B1 374 aa15.24■□□□□ 0.03
TRA2B-205ENST00000453386 EFHD2Q96C19 240 aaPredicted RBP15.24■□□□□ 0.03
TRA2B-205ENST00000453386 ERVK-11Q9UQG0 969 aa15.24■□□□□ 0.03
TRA2B-205ENST00000453386 METTL15A6NJ78 407 aa15.24■□□□□ 0.03
TRA2B-205ENST00000453386 SAGE2PA6NJ88 616 aa15.24■□□□□ 0.03
TRA2B-205ENST00000453386 M0R082 166 aa15.24■□□□□ 0.03
TRA2B-205ENST00000453386 SMAD6O43541 496 aaKnown RBP15.24■□□□□ 0.03
TRA2B-205ENST00000453386 ADAMTS4O75173 837 aa15.24■□□□□ 0.03
TRA2B-205ENST00000453386 RFPL2O75678 378 aa15.24■□□□□ 0.03
TRA2B-205ENST00000453386 TRBC1P01850 177 aa15.24■□□□□ 0.03
TRA2B-205ENST00000453386 CKBP12277 381 aa15.24■□□□□ 0.03
TRA2B-205ENST00000453386 RRM2P31350 389 aa15.24■□□□□ 0.03
TRA2B-205ENST00000453386 RCVRNP35243 200 aa15.24■□□□□ 0.03
TRA2B-205ENST00000453386 CSKP41240 450 aa15.24■□□□□ 0.03
TRA2B-205ENST00000453386 ITGA1P56199 1179 aa15.24■□□□□ 0.03
TRA2B-205ENST00000453386 CYP4F2P78329 520 aa15.24■□□□□ 0.03
TRA2B-205ENST00000453386 CDC20Q12834 499 aa15.24■□□□□ 0.03
TRA2B-205ENST00000453386 FOXD4Q12950 439 aaPredicted RBP15.24■□□□□ 0.03
TRA2B-205ENST00000453386 SF1Q15637 639 aaKnown RBP15.24■□□□□ 0.03
TRA2B-205ENST00000453386 ZNF181Q2M3W8 571 aa15.24■□□□□ 0.03
TRA2B-205ENST00000453386 TPRG1LQ5T0D9 272 aa15.24■□□□□ 0.03
TRA2B-205ENST00000453386 CYP2U1Q7Z449 544 aa15.24■□□□□ 0.03
TRA2B-205ENST00000453386 HEATR4Q86WZ0 1026 aa15.24■□□□□ 0.03
TRA2B-205ENST00000453386 FCGR1BQ92637 280 aa15.24■□□□□ 0.03
TRA2B-205ENST00000453386 TTLL2Q9BWV7 592 aa15.24■□□□□ 0.03
TRA2B-205ENST00000453386 RNF167Q9H6Y7 350 aa15.24■□□□□ 0.03
TRA2B-205ENST00000453386 CWH43Q9H720 699 aa15.24■□□□□ 0.03
TRA2B-205ENST00000453386 VWA8A3KMH1 1905 aa15.23■□□□□ 0.03
TRA2B-205ENST00000453386 SH3BGRLO75368 114 aa15.23■□□□□ 0.03
TRA2B-205ENST00000453386 SEMG1P04279 462 aa15.23■□□□□ 0.03
TRA2B-205ENST00000453386 GPX2P18283 190 aa15.23■□□□□ 0.03
TRA2B-205ENST00000453386 CTGFP29279 349 aa15.23■□□□□ 0.03
TRA2B-205ENST00000453386 AP1S1P61966 158 aa15.23■□□□□ 0.03
TRA2B-205ENST00000453386 CDH18Q13634 790 aa15.23■□□□□ 0.03
TRA2B-205ENST00000453386 MBTPS1Q14703 1052 aa15.23■□□□□ 0.03
TRA2B-205ENST00000453386 UGT8Q16880 541 aa15.23■□□□□ 0.03
TRA2B-205ENST00000453386 LYPLAL1Q5VWZ2 237 aa15.23■□□□□ 0.03
TRA2B-205ENST00000453386 FRG2Q64ET8 278 aa15.23■□□□□ 0.03
TRA2B-205ENST00000453386 NEK5Q6P3R8 708 aa15.23■□□□□ 0.03
TRA2B-205ENST00000453386 TSPAN33Q86UF1 283 aa15.23■□□□□ 0.03
TRA2B-205ENST00000453386 ZNF513Q8N8E2 541 aaPredicted RBP15.23■□□□□ 0.03
TRA2B-205ENST00000453386 MYDGFQ969H8 173 aa15.23■□□□□ 0.03
TRA2B-205ENST00000453386 MAL2Q969L2 176 aa15.23■□□□□ 0.03
TRA2B-205ENST00000453386 HRASLS5Q96KN8 279 aa15.23■□□□□ 0.03
TRA2B-205ENST00000453386 FRG2BQ96QU4 278 aa15.23■□□□□ 0.03
TRA2B-205ENST00000453386 PITX2Q99697 317 aa15.23■□□□□ 0.03
TRA2B-205ENST00000453386 ATG10Q9H0Y0 220 aa15.23■□□□□ 0.03
TRA2B-205ENST00000453386 TESMINQ9Y4I5 508 aa15.23■□□□□ 0.03
TRA2B-205ENST00000453386 C2orf78A6NCI8 922 aa15.23■□□□□ 0.03
TRA2B-205ENST00000453386 PSMD11O00231 422 aa15.23■□□□□ 0.03
TRA2B-205ENST00000453386 TAF4O00268 1085 aa15.23■□□□□ 0.03
TRA2B-205ENST00000453386 SUV39H1O43463 412 aa15.23■□□□□ 0.03
TRA2B-205ENST00000453386 ASNA1O43681 348 aa15.23■□□□□ 0.03
TRA2B-205ENST00000453386 KCNK2O95069 426 aa15.23■□□□□ 0.03
TRA2B-205ENST00000453386 HSMCR30P0CW71 290 aa15.23■□□□□ 0.03
TRA2B-205ENST00000453386 SPNP16150 400 aa15.23■□□□□ 0.03
TRA2B-205ENST00000453386 CCR7P32248 378 aa15.23■□□□□ 0.03
TRA2B-205ENST00000453386 SPAM1P38567 509 aa15.23■□□□□ 0.03
TRA2B-205ENST00000453386 SLC19A1P41440 591 aa15.23■□□□□ 0.03
TRA2B-205ENST00000453386 SLC11A1P49279 550 aa15.23■□□□□ 0.03
TRA2B-205ENST00000453386 CSNK2BP67870 215 aa15.23■□□□□ 0.03
TRA2B-205ENST00000453386 SRSF11Q05519 484 aaKnown RBP15.23■□□□□ 0.03
TRA2B-205ENST00000453386 SF3B4Q15427 424 aaKnown RBP eCLIP15.23■□□□□ 0.037e-11■■■□□ 14.7
TRA2B-205ENST00000453386 TAF12Q16514 161 aa15.23■□□□□ 0.03
TRA2B-205ENST00000453386 FAM26DQ5JW98 314 aa15.23■□□□□ 0.03
TRA2B-205ENST00000453386 USP43Q70EL4 1123 aa15.23■□□□□ 0.03
TRA2B-205ENST00000453386 CCDC103Q8IW40 242 aa15.23■□□□□ 0.03
TRA2B-205ENST00000453386 KIAA1958Q8N8K9 716 aa15.23■□□□□ 0.03
TRA2B-205ENST00000453386 OR52J3Q8NH60 311 aa15.23■□□□□ 0.03
TRA2B-205ENST00000453386 SPPL2AQ8TCT8 520 aa15.23■□□□□ 0.03
TRA2B-205ENST00000453386 CSGALNACT1Q8TDX6 532 aa15.23■□□□□ 0.03
TRA2B-205ENST00000453386 FEVQ99581 238 aa15.23■□□□□ 0.03
TRA2B-205ENST00000453386 EHD1Q9H4M9 534 aa15.23■□□□□ 0.03
TRA2B-205ENST00000453386 TPT1P8Q9HAU6 139 aa15.23■□□□□ 0.03
TRA2B-205ENST00000453386 MARCH5Q9NX47 278 aa15.23■□□□□ 0.03
TRA2B-205ENST00000453386 TRPM5Q9NZQ8 1165 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms