RNA–Protein interactions for RNA: ENST00000452852.1

LINC00393-202, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 485 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-202ENST00000452852 ROBO4Q8WZ75 1007 aa4.18□□□□□ -1.74
LINC00393-202ENST00000452852 ERLEC1Q96DZ1 483 aa4.18□□□□□ -1.74
LINC00393-202ENST00000452852 HES6Q96HZ4 224 aa4.18□□□□□ -1.74
LINC00393-202ENST00000452852 SEMA3CQ99985 751 aa4.18□□□□□ -1.74
LINC00393-202ENST00000452852 C16orf70Q9BSU1 422 aa4.18□□□□□ -1.74
LINC00393-202ENST00000452852 PI4K2AQ9BTU6 479 aa4.18□□□□□ -1.74
LINC00393-202ENST00000452852 MLPHQ9BV36 600 aaPredicted RBP4.18□□□□□ -1.74
LINC00393-202ENST00000452852 SPZ1Q9BXG8 430 aa4.18□□□□□ -1.74
LINC00393-202ENST00000452852 PSTPIP2Q9H939 334 aa4.18□□□□□ -1.74
LINC00393-202ENST00000452852 CLK4Q9HAZ1 481 aaKnown RBP4.18□□□□□ -1.74
LINC00393-202ENST00000452852 ABCB8Q9NUT2 735 aa4.18□□□□□ -1.74
LINC00393-202ENST00000452852 OR6C3Q9NZP0 311 aa4.18□□□□□ -1.74
LINC00393-202ENST00000452852 CNIH4Q9P003 139 aa4.18□□□□□ -1.74
LINC00393-202ENST00000452852 CACNG4Q9UBN1 327 aa4.18□□□□□ -1.74
LINC00393-202ENST00000452852 UBA2Q9UBT2 640 aaPredicted RBP4.18□□□□□ -1.74
LINC00393-202ENST00000452852 MOSPD1Q9UJG1 213 aa4.18□□□□□ -1.74
LINC00393-202ENST00000452852 ACSL5Q9ULC5 683 aa4.18□□□□□ -1.74
LINC00393-202ENST00000452852 ATG2AQ2TAZ0 1938 aa4.18□□□□□ -1.74
LINC00393-202ENST00000452852 FRMPD4Q14CM0 1322 aa4.18□□□□□ -1.74
LINC00393-202ENST00000452852 NRCAMQ92823 1304 aa4.18□□□□□ -1.74
LINC00393-202ENST00000452852 EVPLQ92817 2033 aa4.17□□□□□ -1.74
LINC00393-202ENST00000452852 LINC01553A4QN01 128 aa4.17□□□□□ -1.74
LINC00393-202ENST00000452852 EPOPA6NHQ4 379 aa4.17□□□□□ -1.74
LINC00393-202ENST00000452852 SLC16A5O15375 505 aa4.17□□□□□ -1.74
LINC00393-202ENST00000452852 NDUFS4O43181 175 aa4.17□□□□□ -1.74
LINC00393-202ENST00000452852 LDB2O43679 373 aa4.17□□□□□ -1.74
LINC00393-202ENST00000452852 CYTH3O43739 400 aa4.17□□□□□ -1.74
LINC00393-202ENST00000452852 ZIC3O60481 467 aa4.17□□□□□ -1.74
LINC00393-202ENST00000452852 OAZ2O95190 189 aa4.17□□□□□ -1.74
LINC00393-202ENST00000452852 GCNT3O95395 438 aa4.17□□□□□ -1.74
LINC00393-202ENST00000452852 SYF2O95926 243 aaKnown RBP4.17□□□□□ -1.74
LINC00393-202ENST00000452852 P4HA1P13674 534 aa4.17□□□□□ -1.74
LINC00393-202ENST00000452852 TCF4P15884 667 aa4.17□□□□□ -1.74
LINC00393-202ENST00000452852 ADRA2CP18825 462 aa4.17□□□□□ -1.74
LINC00393-202ENST00000452852 KCNA5P22460 613 aa4.17□□□□□ -1.74
LINC00393-202ENST00000452852 SP100P23497 879 aaPredicted RBP4.17□□□□□ -1.74
LINC00393-202ENST00000452852 MARK3P27448 753 aa4.17□□□□□ -1.74
LINC00393-202ENST00000452852 TKTP29401 623 aaKnown RBP4.17□□□□□ -1.74
LINC00393-202ENST00000452852 CDC25CP30307 473 aa4.17□□□□□ -1.74
LINC00393-202ENST00000452852 HNRNPH1P31943 449 aaKnown RBP4.17□□□□□ -1.74
LINC00393-202ENST00000452852 CD81P60033 236 aa4.17□□□□□ -1.74
LINC00393-202ENST00000452852 CSNK2A1P68400 391 aaPredicted RBP4.17□□□□□ -1.74
LINC00393-202ENST00000452852 TROAPQ12815 778 aa4.17□□□□□ -1.74
LINC00393-202ENST00000452852 RPA4Q13156 261 aa4.17□□□□□ -1.74
LINC00393-202ENST00000452852 CBX3Q13185 183 aa4.17□□□□□ -1.74
LINC00393-202ENST00000452852 MAD2L1Q13257 205 aaPredicted RBP4.17□□□□□ -1.74
LINC00393-202ENST00000452852 MELKQ14680 651 aa4.17□□□□□ -1.74
LINC00393-202ENST00000452852 TAZQ16635 292 aa4.17□□□□□ -1.74
LINC00393-202ENST00000452852 DUSP6Q16828 381 aa4.17□□□□□ -1.74
LINC00393-202ENST00000452852 C2orf76Q3KRA6 126 aa4.17□□□□□ -1.74
LINC00393-202ENST00000452852 SLC39A12Q504Y0 691 aa4.17□□□□□ -1.74
LINC00393-202ENST00000452852 DNTTIP2Q5QJE6 756 aaKnown RBP4.17□□□□□ -1.74
LINC00393-202ENST00000452852 DCST1Q5T197 706 aa4.17□□□□□ -1.74
LINC00393-202ENST00000452852 MOXD1Q6UVY6 613 aa4.17□□□□□ -1.74
LINC00393-202ENST00000452852 SLC36A4Q6YBV0 504 aa4.17□□□□□ -1.74
LINC00393-202ENST00000452852 ZNF517Q6ZMY9 492 aaPredicted RBP4.17□□□□□ -1.74
LINC00393-202ENST00000452852 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.17□□□□□ -1.74
LINC00393-202ENST00000452852 TPRG1Q6ZUI0 275 aa4.17□□□□□ -1.74
LINC00393-202ENST00000452852 DET1Q7L5Y6 550 aa4.17□□□□□ -1.74
LINC00393-202ENST00000452852 PALB2Q86YC2 1186 aa4.17□□□□□ -1.74
LINC00393-202ENST00000452852 FOXRED2Q8IWF2 684 aa4.17□□□□□ -1.74
LINC00393-202ENST00000452852 SAMD14Q8IZD0 417 aaPredicted RBP4.17□□□□□ -1.74
LINC00393-202ENST00000452852 ZNF619Q8N2I2 560 aa4.17□□□□□ -1.74
LINC00393-202ENST00000452852 UXS1Q8NBZ7 420 aa4.17□□□□□ -1.74
LINC00393-202ENST00000452852 CSNK2A3Q8NEV1 391 aa4.17□□□□□ -1.74
LINC00393-202ENST00000452852 DBF4BQ8NFT6 615 aa4.17□□□□□ -1.74
LINC00393-202ENST00000452852 ST6GALNAC6Q969X2 333 aa4.17□□□□□ -1.74
LINC00393-202ENST00000452852 MRPL38Q96DV4 380 aaKnown RBP4.17□□□□□ -1.74
LINC00393-202ENST00000452852 FAM122AQ96E09 287 aa4.17□□□□□ -1.74
LINC00393-202ENST00000452852 SPDL1Q96EA4 605 aa4.17□□□□□ -1.74
LINC00393-202ENST00000452852 PDLIM5Q96HC4 596 aaKnown RBP4.17□□□□□ -1.74
LINC00393-202ENST00000452852 APOLD1Q96LR9 279 aa4.17□□□□□ -1.74
LINC00393-202ENST00000452852 CAMK1GQ96NX5 476 aa4.17□□□□□ -1.74
LINC00393-202ENST00000452852 INPP4AQ96PE3 977 aaPredicted RBP4.17□□□□□ -1.74
LINC00393-202ENST00000452852 TMEM237Q96Q45 408 aa4.17□□□□□ -1.74
LINC00393-202ENST00000452852 CTAGE1Q96RT6 745 aa4.17□□□□□ -1.74
LINC00393-202ENST00000452852 ATP6V0BQ99437 205 aa4.17□□□□□ -1.74
LINC00393-202ENST00000452852 EGFL8Q99944 293 aa4.17□□□□□ -1.74
LINC00393-202ENST00000452852 SLC5A7Q9GZV3 580 aa4.17□□□□□ -1.74
LINC00393-202ENST00000452852 IL25Q9H293 177 aa4.17□□□□□ -1.74
LINC00393-202ENST00000452852 THAP9Q9H5L6 903 aa4.17□□□□□ -1.74
LINC00393-202ENST00000452852 AZI2Q9H6S1 392 aa4.17□□□□□ -1.74
LINC00393-202ENST00000452852 LY9Q9HBG7 655 aa4.17□□□□□ -1.74
LINC00393-202ENST00000452852 CNGB3Q9NQW8 809 aa4.17□□□□□ -1.74
LINC00393-202ENST00000452852 TRMT1Q9NXH9 659 aaKnown RBP4.17□□□□□ -1.74
LINC00393-202ENST00000452852 ERAP1Q9NZ08 941 aa4.17□□□□□ -1.74
LINC00393-202ENST00000452852 CDC14AQ9UNH5 594 aa4.17□□□□□ -1.74
LINC00393-202ENST00000452852 PRRC2BQ5JSZ5 2229 aaKnown RBP4.17□□□□□ -1.74
LINC00393-202ENST00000452852 COL4A6Q14031 1691 aa4.16□□□□□ -1.74
LINC00393-202ENST00000452852 PLXNA4Q9HCM2 1894 aa4.16□□□□□ -1.74
LINC00393-202ENST00000452852 A0A087WV48 116 aa4.16□□□□□ -1.74
LINC00393-202ENST00000452852 FEZF1A0PJY2 475 aa4.16□□□□□ -1.74
LINC00393-202ENST00000452852 HEPACAM2A8MVW5 462 aa4.16□□□□□ -1.74
LINC00393-202ENST00000452852 ST8SIA3O43173 380 aa4.16□□□□□ -1.74
LINC00393-202ENST00000452852 ZBTB43O43298 467 aa4.16□□□□□ -1.74
LINC00393-202ENST00000452852 HSPA12AO43301 675 aa4.16□□□□□ -1.74
LINC00393-202ENST00000452852 XRCC3O43542 346 aa4.16□□□□□ -1.74
LINC00393-202ENST00000452852 B3GALNT1O75752 331 aa4.16□□□□□ -1.74
LINC00393-202ENST00000452852 PLEKHA8P1O95397 391 aa4.16□□□□□ -1.74
LINC00393-202ENST00000452852 SLC4A1P02730 911 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms