RNA–Protein interactions for RNA: ENST00000451492.5

USP54-207, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 509 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-207ENST00000451492 OCA2Q04671 838 aa9.23□□□□□ -0.93
USP54-207ENST00000451492 PRDX1Q06830 199 aaKnown RBP9.23□□□□□ -0.93
USP54-207ENST00000451492 KLC1Q07866 573 aa9.23□□□□□ -0.93
USP54-207ENST00000451492 CALCOCO2Q13137 446 aa9.23□□□□□ -0.93
USP54-207ENST00000451492 NAE1Q13564 534 aa9.23□□□□□ -0.93
USP54-207ENST00000451492 SYT16Q17RD7 645 aa9.23□□□□□ -0.93
USP54-207ENST00000451492 MUM1Q2TAK8 710 aa9.23□□□□□ -0.93
USP54-207ENST00000451492 PRR30Q53SZ7 412 aaPredicted RBP9.23□□□□□ -0.93
USP54-207ENST00000451492 VWA2Q5GFL6 755 aa9.23□□□□□ -0.93
USP54-207ENST00000451492 DCAF10Q5QP82 559 aa9.23□□□□□ -0.93
USP54-207ENST00000451492 STEAP4Q687X5 459 aa9.23□□□□□ -0.93
USP54-207ENST00000451492 LRRC8EQ6NSJ5 796 aa9.23□□□□□ -0.93
USP54-207ENST00000451492 FBXO42Q6P3S6 717 aa9.23□□□□□ -0.93
USP54-207ENST00000451492 AGTRAPQ6RW13 159 aa9.23□□□□□ -0.93
USP54-207ENST00000451492 KIAA0408Q6ZU52 694 aa9.23□□□□□ -0.93
USP54-207ENST00000451492 OVCH1Q7RTY7 1134 aa9.23□□□□□ -0.93
USP54-207ENST00000451492 STRA8Q7Z7C7 330 aa9.23□□□□□ -0.93
USP54-207ENST00000451492 GALNT16Q8N428 558 aa9.23□□□□□ -0.93
USP54-207ENST00000451492 FBXO15Q8NCQ5 510 aaPredicted RBP9.23□□□□□ -0.93
USP54-207ENST00000451492 MCOLN3Q8TDD5 553 aa9.23□□□□□ -0.93
USP54-207ENST00000451492 PTERQ96BW5 349 aa9.23□□□□□ -0.93
USP54-207ENST00000451492 PYCR2Q96C36 320 aa9.23□□□□□ -0.93
USP54-207ENST00000451492 C8orf44Q96CB5 159 aa9.23□□□□□ -0.93
USP54-207ENST00000451492 FER1L6-AS2Q96M78 137 aa9.23□□□□□ -0.93
USP54-207ENST00000451492 ZNF285Q96NJ3 590 aa9.23□□□□□ -0.93
USP54-207ENST00000451492 PRAP1Q96NZ9 151 aa9.23□□□□□ -0.93
USP54-207ENST00000451492 SPSB2Q99619 263 aa9.23□□□□□ -0.93
USP54-207ENST00000451492 MACROD1Q9BQ69 325 aa9.23□□□□□ -0.93
USP54-207ENST00000451492 CRB3Q9BUF7 120 aa9.23□□□□□ -0.93
USP54-207ENST00000451492 UNKQ9C0B0 810 aaKnown RBP9.23□□□□□ -0.93
USP54-207ENST00000451492 SAYSD1Q9NPB0 183 aa9.23□□□□□ -0.93
USP54-207ENST00000451492 KLHL42Q9P2K6 505 aa9.23□□□□□ -0.93
USP54-207ENST00000451492 ANKMY1Q9P2S6 941 aa9.23□□□□□ -0.93
USP54-207ENST00000451492 ZNF451Q9Y4E5 1061 aa9.23□□□□□ -0.93
USP54-207ENST00000451492 PCDHGA9Q9Y5G4 932 aaKnown RBP9.23□□□□□ -0.93
USP54-207ENST00000451492 UBR5O95071 2799 aaPredicted RBP9.23□□□□□ -0.93
USP54-207ENST00000451492 COL12A1Q99715 3063 aa9.23□□□□□ -0.93
USP54-207ENST00000451492 RELNP78509 3460 aa9.22□□□□□ -0.93
USP54-207ENST00000451492 FAM95CA0A1B0GW59 222 aa9.22□□□□□ -0.93
USP54-207ENST00000451492 AGPSO00116 658 aa9.22□□□□□ -0.93
USP54-207ENST00000451492 EIF3FO00303 357 aaPredicted RBP9.22□□□□□ -0.93
USP54-207ENST00000451492 SOCS6O14544 535 aa9.22□□□□□ -0.93
USP54-207ENST00000451492 DPM1O60762 260 aa9.22□□□□□ -0.93
USP54-207ENST00000451492 UQCRHP07919 91 aa9.22□□□□□ -0.93
USP54-207ENST00000451492 ANXA5P08758 320 aa9.22□□□□□ -0.93
USP54-207ENST00000451492 CD63P08962 238 aa9.22□□□□□ -0.93
USP54-207ENST00000451492 HIST1H2AGP0C0S8 130 aaPredicted RBP9.22□□□□□ -0.93
USP54-207ENST00000451492 HIST1H2ADP20671 130 aa9.22□□□□□ -0.93
USP54-207ENST00000451492 FDXRP22570 491 aa9.22□□□□□ -0.93
USP54-207ENST00000451492 IL2P60568 153 aa9.22□□□□□ -0.93
USP54-207ENST00000451492 SNRPNP63162 240 aaKnown RBP9.22□□□□□ -0.93
USP54-207ENST00000451492 FOXK1P85037 733 aa9.22□□□□□ -0.93
USP54-207ENST00000451492 MAT1AQ00266 395 aaKnown RBP9.22□□□□□ -0.93
USP54-207ENST00000451492 EEF1A2Q05639 463 aaKnown RBP9.22□□□□□ -0.93
USP54-207ENST00000451492 MGAT5Q09328 741 aa9.22□□□□□ -0.93
USP54-207ENST00000451492 SP140Q13342 867 aa9.22□□□□□ -0.93
USP54-207ENST00000451492 PRTGQ2VWP7 1150 aa9.22□□□□□ -0.93
USP54-207ENST00000451492 TUBB8Q3ZCM7 444 aa9.22□□□□□ -0.93
USP54-207ENST00000451492 MFSD4BQ5TF39 518 aa9.22□□□□□ -0.93
USP54-207ENST00000451492 YOD1Q5VVQ6 348 aaPredicted RBP9.22□□□□□ -0.93
USP54-207ENST00000451492 ZNF425Q6IV72 752 aa9.22□□□□□ -0.93
USP54-207ENST00000451492 PRSS41Q7RTY9 318 aa9.22□□□□□ -0.93
USP54-207ENST00000451492 CCDC25Q86WR0 208 aa9.22□□□□□ -0.93
USP54-207ENST00000451492 C17orf64Q86WR6 236 aa9.22□□□□□ -0.93
USP54-207ENST00000451492 PARP9Q8IXQ6 854 aa9.22□□□□□ -0.93
USP54-207ENST00000451492 LRRC56Q8IYG6 542 aaPredicted RBP9.22□□□□□ -0.93
USP54-207ENST00000451492 EFCAB3Q8N7B9 438 aa9.22□□□□□ -0.93
USP54-207ENST00000451492 SPATA4Q8NEY3 305 aa9.22□□□□□ -0.93
USP54-207ENST00000451492 STT3BQ8TCJ2 826 aa9.22□□□□□ -0.93
USP54-207ENST00000451492 MIEF2Q96C03 454 aa9.22□□□□□ -0.93
USP54-207ENST00000451492 LRRC39Q96DD0 335 aa9.22□□□□□ -0.93
USP54-207ENST00000451492 HIST1H2AHQ96KK5 128 aa9.22□□□□□ -0.93
USP54-207ENST00000451492 CCDC138Q96M89 665 aa9.22□□□□□ -0.93
USP54-207ENST00000451492 IP6K3Q96PC2 410 aa9.22□□□□□ -0.93
USP54-207ENST00000451492 HIST1H2AJQ99878 128 aa9.22□□□□□ -0.93
USP54-207ENST00000451492 H2AFJQ9BTM1 129 aa9.22□□□□□ -0.93
USP54-207ENST00000451492 WDR54Q9H977 334 aa9.22□□□□□ -0.93
USP54-207ENST00000451492 PARVBQ9HBI1 364 aa9.22□□□□□ -0.93
USP54-207ENST00000451492 ARL15Q9NXU5 204 aa9.22□□□□□ -0.93
USP54-207ENST00000451492 TRPC4Q9UBN4 977 aa9.22□□□□□ -0.93
USP54-207ENST00000451492 ZNF282Q9UDV7 671 aaPredicted RBP9.22□□□□□ -0.93
USP54-207ENST00000451492 IKZF3Q9UKT9 509 aa9.22□□□□□ -0.93
USP54-207ENST00000451492 MRPS2Q9Y399 296 aaKnown RBP9.22□□□□□ -0.93
USP54-207ENST00000451492 KLK4Q9Y5K2 254 aa9.22□□□□□ -0.93
USP54-207ENST00000451492 HS3ST3B1Q9Y662 390 aa9.22□□□□□ -0.93
USP54-207ENST00000451492 MYO18BQ8IUG5 2567 aa9.22□□□□□ -0.93
USP54-207ENST00000451492 CPAMD8Q8IZJ3 1885 aa9.21□□□□□ -0.93
USP54-207ENST00000451492 MAP2K7O14733 419 aa9.21□□□□□ -0.94
USP54-207ENST00000451492 TP73O15350 636 aa9.21□□□□□ -0.94
USP54-207ENST00000451492 CEACAM4O75871 244 aa9.21□□□□□ -0.94
USP54-207ENST00000451492 TSPAN12O95859 305 aa9.21□□□□□ -0.94
USP54-207ENST00000451492 ALBP02768 609 aa9.21□□□□□ -0.94
USP54-207ENST00000451492 SERPIND1P05546 499 aa9.21□□□□□ -0.94
USP54-207ENST00000451492 ZGLP1P0C6A0 271 aa9.21□□□□□ -0.94
USP54-207ENST00000451492 IL1RNP18510 177 aa9.21□□□□□ -0.94
USP54-207ENST00000451492 MMP11P24347 488 aa9.21□□□□□ -0.94
USP54-207ENST00000451492 SSTR1P30872 391 aa9.21□□□□□ -0.94
USP54-207ENST00000451492 UQCRFS1P47985 274 aa9.21□□□□□ -0.94
USP54-207ENST00000451492 CD97P48960 835 aa9.21□□□□□ -0.94
USP54-207ENST00000451492 ABATP80404 500 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms