RNA–Protein interactions for RNA: ENST00000450940.5

USP40-207, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 670 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-207ENST00000450940 TRMT10BQ6PF06 316 aaKnown RBP18.48■□□□□ 0.55
USP40-207ENST00000450940 KIRREL2Q6UWL6 708 aa18.48■□□□□ 0.55
USP40-207ENST00000450940 CSNK1A1LQ8N752 337 aa18.48■□□□□ 0.55
USP40-207ENST00000450940 PCBD2Q9H0N5 130 aa18.48■□□□□ 0.55
USP40-207ENST00000450940 ZNF552Q9H707 407 aaPredicted RBP18.48■□□□□ 0.55
USP40-207ENST00000450940 TMEM184CQ9NVA4 438 aa18.48■□□□□ 0.55
USP40-207ENST00000450940 CDC23Q9UJX2 597 aa18.48■□□□□ 0.55
USP40-207ENST00000450940 CDC14AQ9UNH5 594 aa18.48■□□□□ 0.55
USP40-207ENST00000450940 CHMP2BQ9UQN3 213 aa18.48■□□□□ 0.55
USP40-207ENST00000450940 RUVBL1Q9Y265 456 aaKnown RBP18.48■□□□□ 0.55
USP40-207ENST00000450940 MAU2Q9Y6X3 613 aa18.48■□□□□ 0.55
USP40-207ENST00000450940 TTLL8A6PVC2 850 aa18.47■□□□□ 0.55
USP40-207ENST00000450940 E7ESA3 106 aa18.47■□□□□ 0.55
USP40-207ENST00000450940 AIMP2Q13155 320 aaKnown RBP18.47■□□□□ 0.55
USP40-207ENST00000450940 HP1BP3Q5SSJ5 553 aaPredicted RBP18.47■□□□□ 0.55
USP40-207ENST00000450940 MYO1HQ8N1T3 1032 aa18.47■□□□□ 0.55
USP40-207ENST00000450940 METTL27Q8N6F8 245 aaPredicted RBP18.47■□□□□ 0.55
USP40-207ENST00000450940 Q8NA96 180 aa18.47■□□□□ 0.55
USP40-207ENST00000450940 STT3BQ8TCJ2 826 aa18.47■□□□□ 0.55
USP40-207ENST00000450940 COL26A1Q96A83 441 aa18.47■□□□□ 0.55
USP40-207ENST00000450940 PNPLA2Q96AD5 504 aa18.47■□□□□ 0.55
USP40-207ENST00000450940 SOX17Q9H6I2 414 aaPredicted RBP18.47■□□□□ 0.55
USP40-207ENST00000450940 CCDC177Q9NQR7 707 aaPredicted RBP18.47■□□□□ 0.55
USP40-207ENST00000450940 CUEDC1Q9NWM3 386 aaPredicted RBP18.47■□□□□ 0.55
USP40-207ENST00000450940 SLC17A6Q9P2U8 582 aa18.47■□□□□ 0.55
USP40-207ENST00000450940 ZNF282Q9UDV7 671 aaPredicted RBP18.47■□□□□ 0.55
USP40-207ENST00000450940 VWA7Q9Y334 891 aa18.47■□□□□ 0.55
USP40-207ENST00000450940 MAP4K5Q9Y4K4 846 aa18.47■□□□□ 0.55
USP40-207ENST00000450940 PTPN13Q12923 2485 aa18.47■□□□□ 0.55
USP40-207ENST00000450940 KCNE1BA0A087WTH5 132 aa18.46■□□□□ 0.55
USP40-207ENST00000450940 H7BY64 318 aa18.46■□□□□ 0.55
USP40-207ENST00000450940 MASP2O00187 686 aa18.46■□□□□ 0.55
USP40-207ENST00000450940 HAT1O14929 419 aa18.46■□□□□ 0.55
USP40-207ENST00000450940 ZGLP1P0C6A0 271 aa18.46■□□□□ 0.55
USP40-207ENST00000450940 FDXRP22570 491 aa18.46■□□□□ 0.55
USP40-207ENST00000450940 SLC26A3P40879 764 aa18.46■□□□□ 0.55
USP40-207ENST00000450940 IL2P60568 153 aa18.46■□□□□ 0.55
USP40-207ENST00000450940 OCA2Q04671 838 aa18.46■□□□□ 0.55
USP40-207ENST00000450940 KLC1Q07866 573 aa18.46■□□□□ 0.55
USP40-207ENST00000450940 DSG2Q14126 1118 aa18.46■□□□□ 0.55
USP40-207ENST00000450940 FAM53BQ14153 422 aa18.46■□□□□ 0.55
USP40-207ENST00000450940 PHKG1Q16816 387 aa18.46■□□□□ 0.55
USP40-207ENST00000450940 HKDC1Q2TB90 917 aa18.46■□□□□ 0.55
USP40-207ENST00000450940 THEMIS2Q5TEJ8 643 aa18.46■□□□□ 0.55
USP40-207ENST00000450940 HECTD2Q5U5R9 776 aa18.46■□□□□ 0.55
USP40-207ENST00000450940 SLC6A19Q695T7 634 aa18.46■□□□□ 0.55
USP40-207ENST00000450940 AGTRAPQ6RW13 159 aa18.46■□□□□ 0.55
USP40-207ENST00000450940 SHISA6Q6ZSJ9 500 aa18.46■□□□□ 0.55
USP40-207ENST00000450940 PALM2Q8IXS6 379 aa18.46■□□□□ 0.55
USP40-207ENST00000450940 RERGQ96A58 199 aaPredicted RBP18.46■□□□□ 0.55
USP40-207ENST00000450940 LINGO1Q96FE5 620 aa18.46■□□□□ 0.55
USP40-207ENST00000450940 CFAP36Q96G28 342 aa18.46■□□□□ 0.55
USP40-207ENST00000450940 PDLIM5Q96HC4 596 aaKnown RBP18.46■□□□□ 0.55
USP40-207ENST00000450940 CABS1Q96KC9 395 aa18.46■□□□□ 0.55
USP40-207ENST00000450940 PRAP1Q96NZ9 151 aa18.46■□□□□ 0.55
USP40-207ENST00000450940 SGPP1Q9BX95 441 aa18.46■□□□□ 0.55
USP40-207ENST00000450940 PPANQ9NQ55 473 aaKnown RBP18.46■□□□□ 0.55
USP40-207ENST00000450940 MOCS1Q9NZB8 636 aa18.46■□□□□ 0.55
USP40-207ENST00000450940 FBXL4Q9UKA2 621 aa18.46■□□□□ 0.55
USP40-207ENST00000450940 COL12A1Q99715 3063 aa18.46■□□□□ 0.55
USP40-207ENST00000450940 RELNP78509 3460 aa18.46■□□□□ 0.55
USP40-207ENST00000450940 HECTD1Q9ULT8 2610 aa18.46■□□□□ 0.55
USP40-207ENST00000450940 RP1L1Q8IWN7 2480 aaPredicted RBP18.45■□□□□ 0.54
USP40-207ENST00000450940 LRRK2Q5S007 2527 aa18.45■□□□□ 0.54
USP40-207ENST00000450940 EFCAB8A8MWE9 144 aa18.45■□□□□ 0.54
USP40-207ENST00000450940 PRPF4O43172 522 aaKnown RBP eCLIP18.45■□□□□ 0.54
USP40-207ENST00000450940 FOXS1O43638 330 aa18.45■□□□□ 0.54
USP40-207ENST00000450940 IPO13O94829 963 aaKnown RBP18.45■□□□□ 0.54
USP40-207ENST00000450940 ALPPP05187 535 aa18.45■□□□□ 0.54
USP40-207ENST00000450940 FBLP22087 321 aaKnown RBP18.45■□□□□ 0.54
USP40-207ENST00000450940 CCND1P24385 295 aa18.45■□□□□ 0.54
USP40-207ENST00000450940 RPL21P46778 160 aaKnown RBP18.45■□□□□ 0.54
USP40-207ENST00000450940 TBPL1P62380 186 aa18.45■□□□□ 0.54
USP40-207ENST00000450940 RAPSNQ13702 412 aa18.45■□□□□ 0.54
USP40-207ENST00000450940 ZXDCQ2QGD7 858 aaPredicted RBP18.45■□□□□ 0.54
USP40-207ENST00000450940 PRAMEF13Q5VWM6 474 aa18.45■□□□□ 0.54
USP40-207ENST00000450940 ATG9BQ674R7 924 aa18.45■□□□□ 0.54
USP40-207ENST00000450940 FAM45BPQ6NSW5 357 aa18.45■□□□□ 0.54
USP40-207ENST00000450940 ATCAYQ86WG3 371 aa18.45■□□□□ 0.54
USP40-207ENST00000450940 AMER3Q8N944 861 aa18.45■□□□□ 0.54
USP40-207ENST00000450940 OR11G2Q8NGC1 345 aa18.45■□□□□ 0.54
USP40-207ENST00000450940 FAM45AQ8TCE6 357 aa18.45■□□□□ 0.54
USP40-207ENST00000450940 CPT1CQ8TCG5 803 aa18.45■□□□□ 0.54
USP40-207ENST00000450940 MIEF2Q96C03 454 aa18.45■□□□□ 0.54
USP40-207ENST00000450940 VPS50Q96JG6 964 aa18.45■□□□□ 0.54
USP40-207ENST00000450940 TGIF2Q9GZN2 237 aa18.45■□□□□ 0.54
USP40-207ENST00000450940 A0A1W2PQ72 361 aa18.44■□□□□ 0.54
USP40-207ENST00000450940 NDC80O14777 642 aa18.44■□□□□ 0.54
USP40-207ENST00000450940 P2RX6O15547 441 aa18.44■□□□□ 0.54
USP40-207ENST00000450940 RPS15AP62244 130 aaKnown RBP18.44■□□□□ 0.54
USP40-207ENST00000450940 MGAT5Q09328 741 aa18.44■□□□□ 0.54
USP40-207ENST00000450940 PDAP1Q13442 181 aaKnown RBP18.44■□□□□ 0.54
USP40-207ENST00000450940 RBBP7Q16576 425 aa18.44■□□□□ 0.54
USP40-207ENST00000450940 VWA2Q5GFL6 755 aa18.44■□□□□ 0.54
USP40-207ENST00000450940 LCTLQ6UWM7 567 aa18.44■□□□□ 0.54
USP40-207ENST00000450940 MBOAT1Q6ZNC8 495 aa18.44■□□□□ 0.54
USP40-207ENST00000450940 VN1R4Q7Z5H5 301 aa18.44■□□□□ 0.54
USP40-207ENST00000450940 PLD3Q8IV08 490 aa18.44■□□□□ 0.54
USP40-207ENST00000450940 GALNT11Q8NCW6 608 aa18.44■□□□□ 0.54
USP40-207ENST00000450940 THAP11Q96EK4 314 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms