RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 CD27P26842 260 aa13.73□□□□□ -0.21
USP39-207ENST00000450066 PIK3CBP42338 1070 aa13.73□□□□□ -0.21
USP39-207ENST00000450066 FZD2Q14332 565 aa13.73□□□□□ -0.21
USP39-207ENST00000450066 TLR1Q15399 786 aa13.73□□□□□ -0.21
USP39-207ENST00000450066 TIGD2Q4W5G0 525 aa13.73□□□□□ -0.21
USP39-207ENST00000450066 ADNP2Q6IQ32 1131 aa13.73□□□□□ -0.21
USP39-207ENST00000450066 NOXRED1Q6NXP6 359 aa13.73□□□□□ -0.21
USP39-207ENST00000450066 TMIGD1Q6UXZ0 262 aa13.73□□□□□ -0.21
USP39-207ENST00000450066 RIPOR1Q6ZS17 1223 aa13.73□□□□□ -0.21
USP39-207ENST00000450066 DCP2Q8IU60 420 aaKnown RBP13.73□□□□□ -0.21
USP39-207ENST00000450066 GPBAR1Q8TDU6 330 aa13.73□□□□□ -0.21
USP39-207ENST00000450066 C11orf24Q96F05 449 aaPredicted RBP13.73□□□□□ -0.21
USP39-207ENST00000450066 KLHDC7BQ96G42 594 aa13.73□□□□□ -0.21
USP39-207ENST00000450066 APOLD1Q96LR9 279 aa13.73□□□□□ -0.21
USP39-207ENST00000450066 GPATCH1Q9BRR8 931 aaKnown RBP13.73□□□□□ -0.21
USP39-207ENST00000450066 DPY30Q9C005 99 aa13.73□□□□□ -0.21
USP39-207ENST00000450066 XKR8Q9H6D3 395 aa13.73□□□□□ -0.21
USP39-207ENST00000450066 NMRK1Q9NWW6 199 aa13.73□□□□□ -0.21
USP39-207ENST00000450066 ICKQ9UPZ9 632 aa13.73□□□□□ -0.21
USP39-207ENST00000450066 LRP4O75096 1905 aa13.73□□□□□ -0.21
USP39-207ENST00000450066 NPPAP01160 153 aa13.73□□□□□ -0.21
USP39-207ENST00000450066 CXCR2P25025 360 aa13.73□□□□□ -0.21
USP39-207ENST00000450066 HNRNPH1P31943 449 aaKnown RBP13.73□□□□□ -0.21
USP39-207ENST00000450066 CLDN8P56748 225 aa13.73□□□□□ -0.21
USP39-207ENST00000450066 MEF2AQ02078 507 aaPredicted RBP13.73□□□□□ -0.21
USP39-207ENST00000450066 FOXM1Q08050 763 aa13.73□□□□□ -0.21
USP39-207ENST00000450066 EIF2B5Q13144 721 aaKnown RBP13.73□□□□□ -0.21
USP39-207ENST00000450066 TCEA2Q15560 299 aa13.73□□□□□ -0.21
USP39-207ENST00000450066 ZNF423Q2M1K9 1284 aa13.73□□□□□ -0.21
USP39-207ENST00000450066 PRMT9Q6P2P2 845 aa13.73□□□□□ -0.21
USP39-207ENST00000450066 LAYNQ6UX15 382 aa13.73□□□□□ -0.21
USP39-207ENST00000450066 PACS2Q86VP3 889 aa13.73□□□□□ -0.21
USP39-207ENST00000450066 PHACTR4Q8IZ21 702 aa13.73□□□□□ -0.21
USP39-207ENST00000450066 MINDY1Q8N5J2 469 aa13.73□□□□□ -0.21
USP39-207ENST00000450066 EFCAB3Q8N7B9 438 aa13.73□□□□□ -0.21
USP39-207ENST00000450066 OR4K1Q8NGD4 311 aa13.73□□□□□ -0.21
USP39-207ENST00000450066 SLC6A18Q96N87 628 aa13.73□□□□□ -0.21
USP39-207ENST00000450066 PITHD1Q9GZP4 211 aaPredicted RBP13.73□□□□□ -0.21
USP39-207ENST00000450066 SPNS1Q9H2V7 528 aa13.73□□□□□ -0.21
USP39-207ENST00000450066 CLMPQ9H6B4 373 aa13.73□□□□□ -0.21
USP39-207ENST00000450066 AASDHPPTQ9NRN7 309 aa13.73□□□□□ -0.21
USP39-207ENST00000450066 ZNF624Q9P2J8 865 aaPredicted RBP13.73□□□□□ -0.21
USP39-207ENST00000450066 POMPQ9Y244 141 aa13.73□□□□□ -0.21
USP39-207ENST00000450066 RUVBL1Q9Y265 456 aaKnown RBP13.73□□□□□ -0.21
USP39-207ENST00000450066 PCDHB11Q9Y5F2 797 aa13.73□□□□□ -0.21
USP39-207ENST00000450066 VCANP13611 3396 aa13.72□□□□□ -0.21
USP39-207ENST00000450066 PRAMEF33A0A0G2JMD5 474 aa13.72□□□□□ -0.21
USP39-207ENST00000450066 SORBS2O94875 1100 aaKnown RBP13.72□□□□□ -0.21
USP39-207ENST00000450066 ETHE1O95571 254 aa13.72□□□□□ -0.21
USP39-207ENST00000450066 LMNAP02545 664 aaKnown RBP13.72□□□□□ -0.21
USP39-207ENST00000450066 IL6P05231 212 aa13.72□□□□□ -0.21
USP39-207ENST00000450066 SDC1P18827 310 aa13.72□□□□□ -0.21
USP39-207ENST00000450066 PSMB5P28074 263 aa13.72□□□□□ -0.21
USP39-207ENST00000450066 CXCL12P48061 93 aa13.72□□□□□ -0.21
USP39-207ENST00000450066 CCR8P51685 355 aa13.72□□□□□ -0.21
USP39-207ENST00000450066 RPS13P62277 151 aaKnown RBP13.72□□□□□ -0.21
USP39-207ENST00000450066 YBX1P67809 324 aaKnown RBP13.72□□□□□ -0.21
USP39-207ENST00000450066 PHEXP78562 749 aa13.72□□□□□ -0.21
USP39-207ENST00000450066 PRDX1Q06830 199 aaKnown RBP13.72□□□□□ -0.21
USP39-207ENST00000450066 ACSM2AQ08AH3 577 aa13.72□□□□□ -0.21
USP39-207ENST00000450066 CEACAM7Q14002 265 aa13.72□□□□□ -0.21
USP39-207ENST00000450066 SPIN4Q56A73 249 aa13.72□□□□□ -0.21
USP39-207ENST00000450066 ICE2Q659A1 982 aa13.72□□□□□ -0.21
USP39-207ENST00000450066 ACSM2BQ68CK6 577 aa13.72□□□□□ -0.21
USP39-207ENST00000450066 DPP10Q8N608 796 aa13.72□□□□□ -0.21
USP39-207ENST00000450066 ZNF740Q8NDX6 193 aa13.72□□□□□ -0.21
USP39-207ENST00000450066 OR2A1Q8NGT9 310 aa13.72□□□□□ -0.21
USP39-207ENST00000450066 CCDC124Q96CT7 223 aaKnown RBP13.72□□□□□ -0.21
USP39-207ENST00000450066 LRRC58Q96CX6 371 aa13.72□□□□□ -0.21
USP39-207ENST00000450066 AIF1LQ9BQI0 150 aa13.72□□□□□ -0.21
USP39-207ENST00000450066 GSDMCQ9BYG8 508 aa13.72□□□□□ -0.21
USP39-207ENST00000450066 DMRT3Q9NQL9 472 aa13.72□□□□□ -0.21
USP39-207ENST00000450066 ADA2Q9NZK5 511 aa13.72□□□□□ -0.21
USP39-207ENST00000450066 OR6C2Q9NZP2 312 aa13.72□□□□□ -0.21
USP39-207ENST00000450066 TMEM181Q9P2C4 612 aa13.72□□□□□ -0.21
USP39-207ENST00000450066 ADGRE2Q9UHX3 823 aa13.72□□□□□ -0.21
USP39-207ENST00000450066 PPT2Q9UMR5 302 aa13.72□□□□□ -0.21
USP39-207ENST00000450066 SLCO1B1Q9Y6L6 691 aa13.72□□□□□ -0.21
USP39-207ENST00000450066 PCM1Q15154 2024 aa13.71□□□□□ -0.21
USP39-207ENST00000450066 FXYD1O00168 92 aa13.71□□□□□ -0.21
USP39-207ENST00000450066 PRICKLE3O43900 615 aaPredicted RBP13.71□□□□□ -0.21
USP39-207ENST00000450066 ME2P23368 584 aa13.71□□□□□ -0.21
USP39-207ENST00000450066 SHMT2P34897 504 aa13.71□□□□□ -0.21
USP39-207ENST00000450066 CLNS1AP54105 237 aaKnown RBP13.71□□□□□ -0.21
USP39-207ENST00000450066 PAGE3Q5JUK9 113 aa13.71□□□□□ -0.21
USP39-207ENST00000450066 PARGQ86W56 976 aa13.71□□□□□ -0.21
USP39-207ENST00000450066 MFSD2AQ8NA29 543 aa13.71□□□□□ -0.21
USP39-207ENST00000450066 CHTF18Q8WVB6 975 aa13.71□□□□□ -0.21
USP39-207ENST00000450066 CXorf40BQ96DE9 158 aa13.71□□□□□ -0.21
USP39-207ENST00000450066 IER2Q9BTL4 223 aa13.71□□□□□ -0.21
USP39-207ENST00000450066 RHBGQ9H310 441 aa13.71□□□□□ -0.21
USP39-207ENST00000450066 DCLRE1BQ9H816 532 aa13.71□□□□□ -0.21
USP39-207ENST00000450066 CUEDC1Q9NWM3 386 aaPredicted RBP13.71□□□□□ -0.21
USP39-207ENST00000450066 KLF15Q9UIH9 416 aa13.71□□□□□ -0.21
USP39-207ENST00000450066 H7BY64 318 aa13.71□□□□□ -0.21
USP39-207ENST00000450066 MYO1DO94832 1006 aa13.71□□□□□ -0.21
USP39-207ENST00000450066 DCNP07585 359 aaKnown RBP13.71□□□□□ -0.21
USP39-207ENST00000450066 TACR1P25103 407 aa13.71□□□□□ -0.21
USP39-207ENST00000450066 SLC19A1P41440 591 aa13.71□□□□□ -0.21
USP39-207ENST00000450066 BLKP51451 505 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms