RNA–Protein interactions for RNA: ENST00000449058.6

TOM1-210, Transcript of target of myb1 membrane trafficking protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TOM1, Length 2,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-210ENST00000449058 TIFAQ96CG3 184 aa16.38■□□□□ 0.21
TOM1-210ENST00000449058 FUNDC2Q9BWH2 189 aa16.38■□□□□ 0.21
TOM1-210ENST00000449058 ERVW-1Q9UQF0 538 aa16.38■□□□□ 0.21
TOM1-210ENST00000449058 TSPAN11A1L157 253 aa16.38■□□□□ 0.21
TOM1-210ENST00000449058 OR2AG2A6NM03 316 aa16.38■□□□□ 0.21
TOM1-210ENST00000449058 MAGEB3O15480 346 aa16.38■□□□□ 0.21
TOM1-210ENST00000449058 FGF18O76093 207 aa16.38■□□□□ 0.21
TOM1-210ENST00000449058 HSD3B1P14060 373 aa16.38■□□□□ 0.21
TOM1-210ENST00000449058 HSD3B2P26439 372 aa16.38■□□□□ 0.21
TOM1-210ENST00000449058 ETV3P41162 512 aa16.38■□□□□ 0.21
TOM1-210ENST00000449058 DMC1Q14565 340 aa16.38■□□□□ 0.21
TOM1-210ENST00000449058 ZNF648Q5T619 568 aaPredicted RBP16.38■□□□□ 0.21
TOM1-210ENST00000449058 GRHL2Q6ISB3 625 aa16.38■□□□□ 0.21
TOM1-210ENST00000449058 CAPN13Q6MZZ7 669 aaPredicted RBP16.38■□□□□ 0.21
TOM1-210ENST00000449058 CBLL1Q75N03 491 aa16.38■□□□□ 0.21
TOM1-210ENST00000449058 GALNT5Q7Z7M9 940 aa16.38■□□□□ 0.21
TOM1-210ENST00000449058 CLECL1Q8IZS7 167 aa16.38■□□□□ 0.21
TOM1-210ENST00000449058 SETD9Q8NE22 299 aa16.38■□□□□ 0.21
TOM1-210ENST00000449058 CNIH3Q8TBE1 160 aa16.38■□□□□ 0.21
TOM1-210ENST00000449058 MTERF1Q99551 399 aaKnown RBP16.38■□□□□ 0.21
TOM1-210ENST00000449058 RIOK2Q9BVS4 552 aaKnown RBP16.38■□□□□ 0.21
TOM1-210ENST00000449058 TBC1D23Q9NUY8 699 aa16.38■□□□□ 0.21
TOM1-210ENST00000449058 BAG5Q9UL15 447 aa16.38■□□□□ 0.21
TOM1-210ENST00000449058 UPK3BL1B0FP48 263 aa16.37■□□□□ 0.21
TOM1-210ENST00000449058 UPK3BL2E5RIL1 263 aa16.37■□□□□ 0.21
TOM1-210ENST00000449058 FABP3P05413 133 aa16.37■□□□□ 0.21
TOM1-210ENST00000449058 LAMP1P11279 417 aa16.37■□□□□ 0.21
TOM1-210ENST00000449058 FPR1P21462 350 aa16.37■□□□□ 0.21
TOM1-210ENST00000449058 HTR1BP28222 390 aa16.37■□□□□ 0.21
TOM1-210ENST00000449058 DNAJA1P31689 397 aaKnown RBP16.37■□□□□ 0.21
TOM1-210ENST00000449058 HNF4AP41235 474 aa16.37■□□□□ 0.21
TOM1-210ENST00000449058 RECQLP46063 649 aaPredicted RBP16.37■□□□□ 0.21
TOM1-210ENST00000449058 BMXP51813 675 aa16.37■□□□□ 0.21
TOM1-210ENST00000449058 GP2P55259 537 aaKnown RBP16.37■□□□□ 0.21
TOM1-210ENST00000449058 VLDLRP98155 873 aa16.37■□□□□ 0.21
TOM1-210ENST00000449058 GTF2H3Q13889 308 aa16.37■□□□□ 0.21
TOM1-210ENST00000449058 KEAP1Q14145 624 aa16.37■□□□□ 0.21
TOM1-210ENST00000449058 AGTRAPQ6RW13 159 aa16.37■□□□□ 0.21
TOM1-210ENST00000449058 EIF3MQ7L2H7 374 aaKnown RBP16.37■□□□□ 0.21
TOM1-210ENST00000449058 KREMEN2Q8NCW0 462 aa16.37■□□□□ 0.21
TOM1-210ENST00000449058 MIPOL1Q8TD10 442 aa16.37■□□□□ 0.21
TOM1-210ENST00000449058 ATL1Q8WXF7 558 aa16.37■□□□□ 0.21
TOM1-210ENST00000449058 MYLIPQ8WY64 445 aa16.37■□□□□ 0.21
TOM1-210ENST00000449058 STARD8Q92502 1023 aa16.37■□□□□ 0.21
TOM1-210ENST00000449058 OR4K3Q96R72 315 aa16.37■□□□□ 0.21
TOM1-210ENST00000449058 HEPHQ9BQS7 1158 aa16.37■□□□□ 0.21
TOM1-210ENST00000449058 BRF2Q9HAW0 419 aa16.37■□□□□ 0.21
TOM1-210ENST00000449058 PCDH12Q9NPG4 1184 aa16.37■□□□□ 0.21
TOM1-210ENST00000449058 STOX2Q9P2F5 926 aaPredicted RBP16.37■□□□□ 0.21
TOM1-210ENST00000449058 BTBD3Q9Y2F9 522 aa16.37■□□□□ 0.21
TOM1-210ENST00000449058 HSPE1-MOB4S4R3N1 261 aa16.37■□□□□ 0.21
TOM1-210ENST00000449058 PTGES3LE9PB15 166 aa16.37■□□□□ 0.21
TOM1-210ENST00000449058 QSOX1O00391 747 aa16.37■□□□□ 0.21
TOM1-210ENST00000449058 TIMP2P16035 220 aa16.37■□□□□ 0.21
TOM1-210ENST00000449058 JUNDP17535 347 aa16.37■□□□□ 0.21
TOM1-210ENST00000449058 CLK3P49761 638 aaKnown RBP16.37■□□□□ 0.21
TOM1-210ENST00000449058 MNX1P50219 401 aaPredicted RBP16.37■□□□□ 0.21
TOM1-210ENST00000449058 ARHGDIAP52565 204 aa16.37■□□□□ 0.21
TOM1-210ENST00000449058 WDR5P61964 334 aaKnown RBP16.37■□□□□ 0.21
TOM1-210ENST00000449058 RAE1P78406 368 aaKnown RBP16.37■□□□□ 0.21
TOM1-210ENST00000449058 IL5RAQ01344 420 aa16.37■□□□□ 0.21
TOM1-210ENST00000449058 ACSM2AQ08AH3 577 aa16.37■□□□□ 0.21
TOM1-210ENST00000449058 VEZF1Q14119 521 aa16.37■□□□□ 0.21
TOM1-210ENST00000449058 LAPTM4AQ15012 233 aa16.37■□□□□ 0.21
TOM1-210ENST00000449058 ACSM2BQ68CK6 577 aa16.37■□□□□ 0.21
TOM1-210ENST00000449058 TMEM215Q68D42 235 aa16.37■□□□□ 0.21
TOM1-210ENST00000449058 VTCN1Q7Z7D3 282 aa16.37■□□□□ 0.21
TOM1-210ENST00000449058 GALNT10Q86SR1 603 aa16.37■□□□□ 0.21
TOM1-210ENST00000449058 SYNPOQ8N3V7 929 aa16.37■□□□□ 0.21
TOM1-210ENST00000449058 IRF7Q92985 503 aa16.37■□□□□ 0.21
TOM1-210ENST00000449058 GLMNQ92990 594 aa16.37■□□□□ 0.21
TOM1-210ENST00000449058 ZSCAN5AQ9BUG6 496 aa16.37■□□□□ 0.21
TOM1-210ENST00000449058 DGCR6LQ9BY27 220 aa16.37■□□□□ 0.21
TOM1-210ENST00000449058 RAD18Q9NS91 495 aa16.37■□□□□ 0.21
TOM1-210ENST00000449058 HCFC1R1Q9NWW0 138 aa16.37■□□□□ 0.21
TOM1-210ENST00000449058 ENPP5Q9UJA9 477 aa16.37■□□□□ 0.21
TOM1-210ENST00000449058 TRIM17Q9Y577 477 aa16.37■□□□□ 0.21
TOM1-210ENST00000449058 PCDHB11Q9Y5F2 797 aa16.37■□□□□ 0.21
TOM1-210ENST00000449058 hCG_2039718K7EN88 272 aa16.36■□□□□ 0.21
TOM1-210ENST00000449058 SCAMP2O15127 329 aaKnown RBP16.36■□□□□ 0.21
TOM1-210ENST00000449058 CCL16O15467 120 aa16.36■□□□□ 0.21
TOM1-210ENST00000449058 LEFTY1O75610 366 aa16.36■□□□□ 0.21
TOM1-210ENST00000449058 CLPXO76031 633 aa16.36■□□□□ 0.21
TOM1-210ENST00000449058 INMTO95050 263 aa16.36■□□□□ 0.21
TOM1-210ENST00000449058 CPSF4O95639 269 aaKnown RBP16.36■□□□□ 0.21
TOM1-210ENST00000449058 ANGPTL1O95841 491 aa16.36■□□□□ 0.21
TOM1-210ENST00000449058 TYRP14679 529 aa16.36■□□□□ 0.21
TOM1-210ENST00000449058 NAE1Q13564 534 aa16.36■□□□□ 0.21
TOM1-210ENST00000449058 TBC1D25Q3MII6 688 aa16.36■□□□□ 0.21
TOM1-210ENST00000449058 PIWIL3Q7Z3Z3 882 aaKnown RBP16.36■□□□□ 0.21
TOM1-210ENST00000449058 ANKRD13BQ86YJ7 626 aa16.36■□□□□ 0.21
TOM1-210ENST00000449058 RAVER1Q8IY67 606 aaKnown RBP16.36■□□□□ 0.21
TOM1-210ENST00000449058 SMYD1Q8NB12 490 aa16.36■□□□□ 0.21
TOM1-210ENST00000449058 BTN2A2Q8WVV5 523 aa16.36■□□□□ 0.21
TOM1-210ENST00000449058 PPP1R14BQ96C90 147 aa16.36■□□□□ 0.21
TOM1-210ENST00000449058 PLEKHA8Q96JA3 519 aa16.36■□□□□ 0.21
TOM1-210ENST00000449058 HSH2DQ96JZ2 352 aa16.36■□□□□ 0.21
TOM1-210ENST00000449058 DPH2Q9BQC3 489 aaPredicted RBP16.36■□□□□ 0.21
TOM1-210ENST00000449058 SPATA9Q9BWV2 254 aa16.36■□□□□ 0.21
TOM1-210ENST00000449058 CHST8Q9H2A9 424 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms