RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 MEN1O00255 615 aa13.95□□□□□ -0.18
USP39-206ENST00000448971 FAM155BO75949 473 aa13.95□□□□□ -0.18
USP39-206ENST00000448971 ACSL3O95573 720 aa13.95□□□□□ -0.18
USP39-206ENST00000448971 C1QAP02745 245 aa13.95□□□□□ -0.18
USP39-206ENST00000448971 CTSBP07858 339 aa13.95□□□□□ -0.18
USP39-206ENST00000448971 AGXTP21549 392 aa13.95□□□□□ -0.18
USP39-206ENST00000448971 ECHS1P30084 290 aa13.95□□□□□ -0.18
USP39-206ENST00000448971 YBX1P67809 324 aaKnown RBP13.95□□□□□ -0.18
USP39-206ENST00000448971 ABATP80404 500 aa13.95□□□□□ -0.18
USP39-206ENST00000448971 MC1RQ01726 317 aa13.95□□□□□ -0.18
USP39-206ENST00000448971 KLRB1Q12918 225 aa13.95□□□□□ -0.18
USP39-206ENST00000448971 LACTB2Q53H82 288 aaPredicted RBP13.95□□□□□ -0.18
USP39-206ENST00000448971 C1orf189Q5VU69 101 aa13.95□□□□□ -0.18
USP39-206ENST00000448971 C16orf46Q6P387 395 aa13.95□□□□□ -0.18
USP39-206ENST00000448971 TMEM207Q6UWW9 146 aa13.95□□□□□ -0.18
USP39-206ENST00000448971 RAPH1Q70E73 1250 aa13.95□□□□□ -0.18
USP39-206ENST00000448971 RNF44Q7L0R7 432 aa13.95□□□□□ -0.18
USP39-206ENST00000448971 ADAMTSL2Q86TH1 951 aa13.95□□□□□ -0.18
USP39-206ENST00000448971 MCATQ8IVS2 390 aaKnown RBP13.95□□□□□ -0.18
USP39-206ENST00000448971 IFT20Q8IY31 132 aa13.95□□□□□ -0.18
USP39-206ENST00000448971 DSELQ8IZU8 1212 aa13.95□□□□□ -0.18
USP39-206ENST00000448971 SLC38A9Q8NBW4 561 aa13.95□□□□□ -0.18
USP39-206ENST00000448971 CYTH2Q99418 400 aa13.95□□□□□ -0.18
USP39-206ENST00000448971 EGFL8Q99944 293 aa13.95□□□□□ -0.18
USP39-206ENST00000448971 ZFYVE21Q9BQ24 234 aa13.95□□□□□ -0.18
USP39-206ENST00000448971 UNKQ9C0B0 810 aaKnown RBP13.95□□□□□ -0.18
USP39-206ENST00000448971 CHST8Q9H2A9 424 aa13.95□□□□□ -0.18
USP39-206ENST00000448971 DHCR7Q9UBM7 475 aaKnown RBP13.95□□□□□ -0.18
USP39-206ENST00000448971 CTNNAL1Q9UBT7 734 aa13.95□□□□□ -0.18
USP39-206ENST00000448971 KCNMB2Q9Y691 235 aa13.95□□□□□ -0.18
USP39-206ENST00000448971 CACNA1DQ01668 2161 aa13.95□□□□□ -0.18
USP39-206ENST00000448971 OR2A25A4D2G3 310 aa13.94□□□□□ -0.18
USP39-206ENST00000448971 C9J4A7 227 aa13.94□□□□□ -0.18
USP39-206ENST00000448971 CDC7O00311 574 aa13.94□□□□□ -0.18
USP39-206ENST00000448971 CTSVO60911 334 aa13.94□□□□□ -0.18
USP39-206ENST00000448971 EIF2S1P05198 315 aaKnown RBP13.94□□□□□ -0.18
USP39-206ENST00000448971 CCND1P24385 295 aa13.94□□□□□ -0.18
USP39-206ENST00000448971 RORAP35398 523 aa13.94□□□□□ -0.18
USP39-206ENST00000448971 VSX2P58304 361 aaPredicted RBP13.94□□□□□ -0.18
USP39-206ENST00000448971 RAB10P61026 200 aa13.94□□□□□ -0.18
USP39-206ENST00000448971 RPS15P62841 145 aaKnown RBP13.94□□□□□ -0.18
USP39-206ENST00000448971 PRDX1Q06830 199 aaKnown RBP13.94□□□□□ -0.18
USP39-206ENST00000448971 NAE1Q13564 534 aa13.94□□□□□ -0.18
USP39-206ENST00000448971 GRM7Q14831 915 aa13.94□□□□□ -0.18
USP39-206ENST00000448971 TSNQ15631 228 aaKnown RBP13.94□□□□□ -0.18
USP39-206ENST00000448971 TCTE1Q5JU00 501 aa13.94□□□□□ -0.18
USP39-206ENST00000448971 TEX35Q5T0J7 233 aa13.94□□□□□ -0.18
USP39-206ENST00000448971 CAPN13Q6MZZ7 669 aaPredicted RBP13.94□□□□□ -0.18
USP39-206ENST00000448971 RHBDD2Q6NTF9 364 aa13.94□□□□□ -0.18
USP39-206ENST00000448971 SBSNQ6UWP8 590 aa13.94□□□□□ -0.18
USP39-206ENST00000448971 RELL1Q8IUW5 271 aa13.94□□□□□ -0.18
USP39-206ENST00000448971 LRRC56Q8IYG6 542 aaPredicted RBP13.94□□□□□ -0.18
USP39-206ENST00000448971 PROKR1Q8TCW9 393 aa13.94□□□□□ -0.18
USP39-206ENST00000448971 ANKRD49Q8WVL7 239 aa13.94□□□□□ -0.18
USP39-206ENST00000448971 ATL1Q8WXF7 558 aa13.94□□□□□ -0.18
USP39-206ENST00000448971 PDLIM5Q96HC4 596 aaKnown RBP13.94□□□□□ -0.18
USP39-206ENST00000448971 RUFY1Q96T51 708 aa13.94□□□□□ -0.18
USP39-206ENST00000448971 PLCD4Q9BRC7 762 aa13.94□□□□□ -0.18
USP39-206ENST00000448971 PCBD2Q9H0N5 130 aa13.94□□□□□ -0.18
USP39-206ENST00000448971 ACTL8Q9H568 366 aa13.94□□□□□ -0.18
USP39-206ENST00000448971 AKIRIN1Q9H9L7 192 aaPredicted RBP13.94□□□□□ -0.18
USP39-206ENST00000448971 CUEDC1Q9NWM3 386 aaPredicted RBP13.94□□□□□ -0.18
USP39-206ENST00000448971 NDOR1Q9UHB4 597 aa13.94□□□□□ -0.18
USP39-206ENST00000448971 IKZF3Q9UKT9 509 aa13.94□□□□□ -0.18
USP39-206ENST00000448971 NFU1Q9UMS0 254 aa13.94□□□□□ -0.18
USP39-206ENST00000448971 TP53TG5Q9Y2B4 290 aa13.94□□□□□ -0.18
USP39-206ENST00000448971 KLK4Q9Y5K2 254 aa13.94□□□□□ -0.18
USP39-206ENST00000448971 ESPL1Q14674 2120 aa13.94□□□□□ -0.18
USP39-206ENST00000448971 BLACEA4D250 179 aa13.93□□□□□ -0.18
USP39-206ENST00000448971 H3BMH7 237 aa13.93□□□□□ -0.18
USP39-206ENST00000448971 ANXA5P08758 320 aa13.93□□□□□ -0.18
USP39-206ENST00000448971 FURINP09958 794 aa13.93□□□□□ -0.18
USP39-206ENST00000448971 EZRP15311 586 aaKnown RBP13.93□□□□□ -0.18
USP39-206ENST00000448971 NR1D1P20393 614 aa13.93□□□□□ -0.18
USP39-206ENST00000448971 ARSFP54793 590 aa13.93□□□□□ -0.18
USP39-206ENST00000448971 RPS18P62269 152 aaKnown RBP13.93□□□□□ -0.18
USP39-206ENST00000448971 BMPR2Q13873 1038 aa13.93□□□□□ -0.18
USP39-206ENST00000448971 SLC9A5Q14940 896 aa13.93□□□□□ -0.18
USP39-206ENST00000448971 PPP1R3AQ16821 1122 aa13.93□□□□□ -0.18
USP39-206ENST00000448971 C4orf17Q53FE4 359 aa13.93□□□□□ -0.18
USP39-206ENST00000448971 UBAP2Q5T6F2 1119 aaKnown RBP13.93□□□□□ -0.18
USP39-206ENST00000448971 FRMPD2BQ6IN97 320 aa13.93□□□□□ -0.18
USP39-206ENST00000448971 TCTN3Q6NUS6 607 aa13.93□□□□□ -0.18
USP39-206ENST00000448971 FAM198BQ6UWH4 519 aa13.93□□□□□ -0.18
USP39-206ENST00000448971 CMC1Q7Z7K0 106 aa13.93□□□□□ -0.18
USP39-206ENST00000448971 PAQR7Q86WK9 346 aa13.93□□□□□ -0.18
USP39-206ENST00000448971 C17orf64Q86WR6 236 aa13.93□□□□□ -0.18
USP39-206ENST00000448971 ENDOVQ8N8Q3 282 aaKnown RBP13.93□□□□□ -0.18
USP39-206ENST00000448971 LRRN4CLQ8ND94 238 aa13.93□□□□□ -0.18
USP39-206ENST00000448971 PYCR2Q96C36 320 aa13.93□□□□□ -0.18
USP39-206ENST00000448971 FBXL8Q96CD0 374 aa13.93□□□□□ -0.18
USP39-206ENST00000448971 DPH2Q9BQC3 489 aaPredicted RBP13.93□□□□□ -0.18
USP39-206ENST00000448971 DERL2Q9GZP9 239 aa13.93□□□□□ -0.18
USP39-206ENST00000448971 ACSS3Q9H6R3 686 aa13.93□□□□□ -0.18
USP39-206ENST00000448971 SNX7Q9UNH6 387 aa13.93□□□□□ -0.18
USP39-206ENST00000448971 NOVA2Q9UNW9 492 aaKnown RBP13.93□□□□□ -0.18
USP39-206ENST00000448971 MED13Q9UHV7 2174 aa13.93□□□□□ -0.18
USP39-206ENST00000448971 IGKV1-8A0A0C4DH67 115 aa13.92□□□□□ -0.18
USP39-206ENST00000448971 A0A1B0GX78 115 aa13.92□□□□□ -0.18
USP39-206ENST00000448971 CDC14CA4D256 554 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms