RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 RDH16O75452 317 aa8.74□□□□□ -1.01
NIPBL-202ENST00000448238 BPGMP07738 259 aa8.74□□□□□ -1.01
NIPBL-202ENST00000448238 SLC2A1P11166 492 aa8.74□□□□□ -1.01
NIPBL-202ENST00000448238 BPIP17213 487 aa8.74□□□□□ -1.01
NIPBL-202ENST00000448238 BMP8BP34820 402 aa8.74□□□□□ -1.01
NIPBL-202ENST00000448238 ZNF84P51523 738 aa8.74□□□□□ -1.01
NIPBL-202ENST00000448238 RPL26P61254 145 aaKnown RBP8.74□□□□□ -1.01
NIPBL-202ENST00000448238 ACTA2P62736 377 aa8.74□□□□□ -1.01
NIPBL-202ENST00000448238 ACTG2P63267 376 aa8.74□□□□□ -1.01
NIPBL-202ENST00000448238 ACTC1P68032 377 aa8.74□□□□□ -1.01
NIPBL-202ENST00000448238 ACTA1P68133 377 aa8.74□□□□□ -1.01
NIPBL-202ENST00000448238 ZNF705AQ6ZN79 300 aaPredicted RBP8.74□□□□□ -1.01
NIPBL-202ENST00000448238 BMP8AQ7Z5Y6 402 aa8.74□□□□□ -1.01
NIPBL-202ENST00000448238 LGI2Q8N0V4 545 aa8.74□□□□□ -1.01
NIPBL-202ENST00000448238 NHLRC2Q8NBF2 726 aa8.74□□□□□ -1.01
NIPBL-202ENST00000448238 CD180Q99467 661 aa8.74□□□□□ -1.01
NIPBL-202ENST00000448238 GCC2Q8IWJ2 1684 aa8.74□□□□□ -1.01
NIPBL-202ENST00000448238 A0A1W2PS29 197 aa8.74□□□□□ -1.01
NIPBL-202ENST00000448238 NPC1O15118 1278 aa8.74□□□□□ -1.01
NIPBL-202ENST00000448238 ALPPP05187 535 aa8.74□□□□□ -1.01
NIPBL-202ENST00000448238 ALAS2P22557 587 aa8.74□□□□□ -1.01
NIPBL-202ENST00000448238 CRISP3P54108 245 aa8.74□□□□□ -1.01
NIPBL-202ENST00000448238 KCNJ2P63252 427 aa8.74□□□□□ -1.01
NIPBL-202ENST00000448238 UNC5AQ6ZN44 842 aa8.74□□□□□ -1.01
NIPBL-202ENST00000448238 FAM58AQ8N1B3 248 aa8.74□□□□□ -1.01
NIPBL-202ENST00000448238 RCBTB1Q8NDN9 531 aa8.74□□□□□ -1.01
NIPBL-202ENST00000448238 OR5T1Q8NG75 326 aa8.74□□□□□ -1.01
NIPBL-202ENST00000448238 CDCA5Q96FF9 252 aa8.74□□□□□ -1.01
NIPBL-202ENST00000448238 ITPAQ9BY32 194 aa8.74□□□□□ -1.01
NIPBL-202ENST00000448238 TMPRSS5Q9H3S3 457 aa8.74□□□□□ -1.01
NIPBL-202ENST00000448238 HAO2Q9NYQ3 351 aa8.74□□□□□ -1.01
NIPBL-202ENST00000448238 SLAIN2Q9P270 581 aa8.74□□□□□ -1.01
NIPBL-202ENST00000448238 CDH22Q9UJ99 828 aa8.74□□□□□ -1.01
NIPBL-202ENST00000448238 TFR2Q9UP52 801 aa8.74□□□□□ -1.01
NIPBL-202ENST00000448238 A0A1W2PP64 1363 aa8.74□□□□□ -1.01
NIPBL-202ENST00000448238 METP08581 1390 aa8.74□□□□□ -1.01
NIPBL-202ENST00000448238 CREB1P16220 341 aa8.74□□□□□ -1.01
NIPBL-202ENST00000448238 PSEN2P49810 448 aa8.74□□□□□ -1.01
NIPBL-202ENST00000448238 HNRNPKP61978 463 aaKnown RBP eCLIP8.74□□□□□ -1.01
NIPBL-202ENST00000448238 DPYSL3Q14195 570 aa8.74□□□□□ -1.01
NIPBL-202ENST00000448238 SLC15A3Q8IY34 581 aa8.74□□□□□ -1.01
NIPBL-202ENST00000448238 ZNF420Q8TAQ5 688 aaPredicted RBP8.74□□□□□ -1.01
NIPBL-202ENST00000448238 NANPQ8TBE9 248 aa8.74□□□□□ -1.01
NIPBL-202ENST00000448238 CMKLR1Q99788 373 aa8.74□□□□□ -1.01
NIPBL-202ENST00000448238 ACTRT3Q9BYD9 372 aa8.74□□□□□ -1.01
NIPBL-202ENST00000448238 SRA1Q9HD15 236 aaKnown RBP8.74□□□□□ -1.01
NIPBL-202ENST00000448238 ENAMQ9NRM1 1142 aa8.74□□□□□ -1.01
NIPBL-202ENST00000448238 DNMT3AQ9Y6K1 912 aaPredicted RBP8.74□□□□□ -1.01
NIPBL-202ENST00000448238 TRAV6A0A075B6T7 132 aa8.73□□□□□ -1.01
NIPBL-202ENST00000448238 C2orf92A0A1B0GVN3 265 aa8.73□□□□□ -1.01
NIPBL-202ENST00000448238 IL1BP01584 269 aa8.73□□□□□ -1.01
NIPBL-202ENST00000448238 CX3CR1P49238 355 aa8.73□□□□□ -1.01
NIPBL-202ENST00000448238 DBPQ10586 325 aaPredicted RBP8.73□□□□□ -1.01
NIPBL-202ENST00000448238 TAF1CQ15572 869 aaPredicted RBP8.73□□□□□ -1.01
NIPBL-202ENST00000448238 ZNF404Q494X3 552 aa8.73□□□□□ -1.01
NIPBL-202ENST00000448238 RNF220Q5VTB9 566 aa8.73□□□□□ -1.01
NIPBL-202ENST00000448238 GEMIN6Q8WXD5 167 aaKnown RBP8.73□□□□□ -1.01
NIPBL-202ENST00000448238 HAS2Q92819 552 aa8.73□□□□□ -1.01
NIPBL-202ENST00000448238 SMIM12Q96EX1 92 aa8.73□□□□□ -1.01
NIPBL-202ENST00000448238 BCAS3Q9H6U6 928 aa8.73□□□□□ -1.01
NIPBL-202ENST00000448238 POPDC2Q9HBU9 364 aa8.73□□□□□ -1.01
NIPBL-202ENST00000448238 MARCH2Q9P0N8 246 aa8.73□□□□□ -1.01
NIPBL-202ENST00000448238 PIM2Q9P1W9 311 aa8.73□□□□□ -1.01
NIPBL-202ENST00000448238 KIAA1324LA8MWY0 1029 aaPredicted RBP8.73□□□□□ -1.01
NIPBL-202ENST00000448238 F6UZH7 168 aa8.73□□□□□ -1.01
NIPBL-202ENST00000448238 RHCEP18577 417 aa8.73□□□□□ -1.01
NIPBL-202ENST00000448238 OXTRP30559 389 aa8.73□□□□□ -1.01
NIPBL-202ENST00000448238 RAB11BQ15907 218 aa8.73□□□□□ -1.01
NIPBL-202ENST00000448238 TANGO2Q6ICL3 276 aa8.73□□□□□ -1.01
NIPBL-202ENST00000448238 ERN2Q76MJ5 926 aaKnown RBP8.73□□□□□ -1.01
NIPBL-202ENST00000448238 ZNF675Q8TD23 568 aa8.73□□□□□ -1.01
NIPBL-202ENST00000448238 PATZ1Q9HBE1 687 aaKnown RBP8.73□□□□□ -1.01
NIPBL-202ENST00000448238 LGR6Q9HBX8 967 aa8.73□□□□□ -1.01
NIPBL-202ENST00000448238 KLF15Q9UIH9 416 aa8.73□□□□□ -1.01
NIPBL-202ENST00000448238 TXNL1O43396 289 aa8.73□□□□□ -1.01
NIPBL-202ENST00000448238 DNAJB5O75953 348 aa8.73□□□□□ -1.01
NIPBL-202ENST00000448238 ENTPD1P49961 510 aa8.73□□□□□ -1.01
NIPBL-202ENST00000448238 NUDT6P53370 316 aa8.73□□□□□ -1.01
NIPBL-202ENST00000448238 RASGRP3Q8IV61 690 aa8.73□□□□□ -1.01
NIPBL-202ENST00000448238 TMEM86AQ8N2M4 240 aa8.73□□□□□ -1.01
NIPBL-202ENST00000448238 PIGBQ92521 554 aa8.73□□□□□ -1.01
NIPBL-202ENST00000448238 AZIN2Q96A70 460 aa8.73□□□□□ -1.01
NIPBL-202ENST00000448238 PHPT1Q9NRX4 125 aaPredicted RBP8.73□□□□□ -1.01
NIPBL-202ENST00000448238 INMT-MINDY4F8WBC2 141 aa8.73□□□□□ -1.01
NIPBL-202ENST00000448238 LRRTM2O43300 516 aa8.73□□□□□ -1.01
NIPBL-202ENST00000448238 MELKQ14680 651 aa8.73□□□□□ -1.01
NIPBL-202ENST00000448238 MOGQ16653 247 aa8.73□□□□□ -1.01
NIPBL-202ENST00000448238 SH3PXD2AQ5TCZ1 1133 aa8.73□□□□□ -1.01
NIPBL-202ENST00000448238 CHST9Q7L1S5 443 aa8.73□□□□□ -1.01
NIPBL-202ENST00000448238 OR8D1Q8WZ84 308 aa8.73□□□□□ -1.01
NIPBL-202ENST00000448238 SEC61A2Q9H9S3 476 aa8.73□□□□□ -1.01
NIPBL-202ENST00000448238 ZBTB26Q9HCK0 441 aa8.73□□□□□ -1.01
NIPBL-202ENST00000448238 IQGAP2Q13576 1575 aa8.73□□□□□ -1.01
NIPBL-202ENST00000448238 GRIN3BO60391 1043 aa8.73□□□□□ -1.01
NIPBL-202ENST00000448238 VIPP01282 170 aa8.73□□□□□ -1.01
NIPBL-202ENST00000448238 PIM1P11309 404 aaPredicted RBP8.73□□□□□ -1.01
NIPBL-202ENST00000448238 TPT1P13693 172 aaKnown RBP8.73□□□□□ -1.01
NIPBL-202ENST00000448238 ARHGAP19Q14CB8 494 aa8.73□□□□□ -1.01
NIPBL-202ENST00000448238 TMEM164Q5U3C3 297 aa8.73□□□□□ -1.01
NIPBL-202ENST00000448238 ZNF852Q6ZMS4 543 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms