RNA–Protein interactions for RNA: ENST00000448192.1

DDX56-207, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-207ENST00000448192 MIEF2Q96C03 454 aa16.87■□□□□ 0.29
DDX56-207ENST00000448192 CCDC138Q96M89 665 aa16.87■□□□□ 0.29
DDX56-207ENST00000448192 OR2A5Q96R48 311 aa16.87■□□□□ 0.29
DDX56-207ENST00000448192 CRB3Q9BUF7 120 aa16.87■□□□□ 0.29
DDX56-207ENST00000448192 TRIM31Q9BZY9 425 aa16.87■□□□□ 0.29
DDX56-207ENST00000448192 ZNF552Q9H707 407 aaPredicted RBP16.87■□□□□ 0.29
DDX56-207ENST00000448192 CCDC177Q9NQR7 707 aaPredicted RBP16.87■□□□□ 0.29
DDX56-207ENST00000448192 SEMA3GQ9NS98 782 aa16.87■□□□□ 0.29
DDX56-207ENST00000448192 MAP10Q9P2G4 905 aa16.87■□□□□ 0.29
DDX56-207ENST00000448192 ZNF282Q9UDV7 671 aaPredicted RBP16.87■□□□□ 0.29
DDX56-207ENST00000448192 VPS4AQ9UN37 437 aa16.87■□□□□ 0.29
DDX56-207ENST00000448192 CDC14AQ9UNH5 594 aa16.87■□□□□ 0.29
DDX56-207ENST00000448192 PDE10AQ9Y233 779 aa16.87■□□□□ 0.29
DDX56-207ENST00000448192 HS3ST3B1Q9Y662 390 aa16.87■□□□□ 0.29
DDX56-207ENST00000448192 DOCK10Q96BY6 2186 aa16.87■□□□□ 0.29
DDX56-207ENST00000448192 VSTM2BA6NLU5 285 aa16.86■□□□□ 0.29
DDX56-207ENST00000448192 H7BY64 318 aa16.86■□□□□ 0.29
DDX56-207ENST00000448192 HAT1O14929 419 aa16.86■□□□□ 0.29
DDX56-207ENST00000448192 C8GP07360 202 aa16.86■□□□□ 0.29
DDX56-207ENST00000448192 ZGLP1P0C6A0 271 aa16.86■□□□□ 0.29
DDX56-207ENST00000448192 ITGA8P53708 1063 aa16.86■□□□□ 0.29
DDX56-207ENST00000448192 EMP3P54852 163 aa16.86■□□□□ 0.29
DDX56-207ENST00000448192 TBPL1P62380 186 aa16.86■□□□□ 0.29
DDX56-207ENST00000448192 KLC1Q07866 573 aa16.86■□□□□ 0.29
DDX56-207ENST00000448192 UBAP2LQ14157 1087 aaKnown RBP16.86■□□□□ 0.29
DDX56-207ENST00000448192 TUBB8Q3ZCM7 444 aa16.86■□□□□ 0.29
DDX56-207ENST00000448192 VWA2Q5GFL6 755 aa16.86■□□□□ 0.29
DDX56-207ENST00000448192 TEDDM1Q5T9Z0 273 aa16.86■□□□□ 0.29
DDX56-207ENST00000448192 HIBCHQ6NVY1 386 aaPredicted RBP16.86■□□□□ 0.29
DDX56-207ENST00000448192 KIRREL2Q6UWL6 708 aa16.86■□□□□ 0.29
DDX56-207ENST00000448192 MBOAT1Q6ZNC8 495 aa16.86■□□□□ 0.29
DDX56-207ENST00000448192 ANKMY2Q8IV38 441 aa16.86■□□□□ 0.29
DDX56-207ENST00000448192 GPATCH11Q8N954 259 aa16.86■□□□□ 0.29
DDX56-207ENST00000448192 PNPLA2Q96AD5 504 aa16.86■□□□□ 0.29
DDX56-207ENST00000448192 ALKBH8Q96BT7 664 aaKnown RBP16.86■□□□□ 0.29
DDX56-207ENST00000448192 LINGO1Q96FE5 620 aa16.86■□□□□ 0.29
DDX56-207ENST00000448192 SNF8Q96H20 258 aa16.86■□□□□ 0.29
DDX56-207ENST00000448192 PDLIM2Q96JY6 352 aa16.86■□□□□ 0.29
DDX56-207ENST00000448192 PRAP1Q96NZ9 151 aa16.86■□□□□ 0.29
DDX56-207ENST00000448192 PLAC1Q9HBJ0 212 aa16.86■□□□□ 0.29
DDX56-207ENST00000448192 MAP4K5Q9Y4K4 846 aa16.86■□□□□ 0.29
DDX56-207ENST00000448192 HECTD1Q9ULT8 2610 aa16.86■□□□□ 0.29
DDX56-207ENST00000448192 CCDC188H7C350 402 aa16.85■□□□□ 0.29
DDX56-207ENST00000448192 FFAR3O14843 346 aa16.85■□□□□ 0.29
DDX56-207ENST00000448192 GPR42O15529 346 aa16.85■□□□□ 0.29
DDX56-207ENST00000448192 IPO13O94829 963 aaKnown RBP16.85■□□□□ 0.29
DDX56-207ENST00000448192 STATHP02808 62 aa16.85■□□□□ 0.29
DDX56-207ENST00000448192 PGGT1BP53609 377 aa16.85■□□□□ 0.29
DDX56-207ENST00000448192 ARL4CP56559 192 aa16.85■□□□□ 0.29
DDX56-207ENST00000448192 SOX8P57073 446 aa16.85■□□□□ 0.29
DDX56-207ENST00000448192 PDAP1Q13442 181 aaKnown RBP16.85■□□□□ 0.29
DDX56-207ENST00000448192 INPP5JQ15735 1006 aaPredicted RBP16.85■□□□□ 0.29
DDX56-207ENST00000448192 PRR30Q53SZ7 412 aaPredicted RBP16.85■□□□□ 0.29
DDX56-207ENST00000448192 IRAK1BP1Q5VVH5 260 aa16.85■□□□□ 0.29
DDX56-207ENST00000448192 PRAMEF13Q5VWM6 474 aa16.85■□□□□ 0.29
DDX56-207ENST00000448192 TRMT10BQ6PF06 316 aaKnown RBP16.85■□□□□ 0.29
DDX56-207ENST00000448192 AGTRAPQ6RW13 159 aa16.85■□□□□ 0.29
DDX56-207ENST00000448192 PARP9Q8IXQ6 854 aa16.85■□□□□ 0.29
DDX56-207ENST00000448192 Q8NA96 180 aa16.85■□□□□ 0.29
DDX56-207ENST00000448192 MMABQ96EY8 250 aaPredicted RBP16.85■□□□□ 0.29
DDX56-207ENST00000448192 VPS50Q96JG6 964 aa16.85■□□□□ 0.29
DDX56-207ENST00000448192 ATG10Q9H0Y0 220 aa16.85■□□□□ 0.29
DDX56-207ENST00000448192 PARVBQ9HBI1 364 aa16.85■□□□□ 0.29
DDX56-207ENST00000448192 TRPC4Q9UBN4 977 aa16.85■□□□□ 0.29
DDX56-207ENST00000448192 C3orf18Q9UK00 162 aa16.85■□□□□ 0.29
DDX56-207ENST00000448192 TEX264Q9Y6I9 313 aa16.85■□□□□ 0.29
DDX56-207ENST00000448192 PABPN1LA6NDY0 278 aaKnown RBP16.84■□□□□ 0.29
DDX56-207ENST00000448192 EFCAB8A8MWE9 144 aa16.84■□□□□ 0.29
DDX56-207ENST00000448192 TXNDC9O14530 226 aa16.84■□□□□ 0.29
DDX56-207ENST00000448192 P2RX6O15547 441 aa16.84■□□□□ 0.29
DDX56-207ENST00000448192 PRPF4O43172 522 aaKnown RBP eCLIP16.84■□□□□ 0.29
DDX56-207ENST00000448192 SEC31AO94979 1220 aaKnown RBP16.84■□□□□ 0.29
DDX56-207ENST00000448192 ANXA5P08758 320 aa16.84■□□□□ 0.29
DDX56-207ENST00000448192 HIST1H2AGP0C0S8 130 aaPredicted RBP16.84■□□□□ 0.29
DDX56-207ENST00000448192 HIST1H2ADP20671 130 aa16.84■□□□□ 0.29
DDX56-207ENST00000448192 UQCRFS1P47985 274 aa16.84■□□□□ 0.29
DDX56-207ENST00000448192 IL2P60568 153 aa16.84■□□□□ 0.29
DDX56-207ENST00000448192 RELAQ04206 551 aa16.84■□□□□ 0.29
DDX56-207ENST00000448192 SP140Q13342 867 aa16.84■□□□□ 0.29
DDX56-207ENST00000448192 NAE1Q13564 534 aa16.84■□□□□ 0.29
DDX56-207ENST00000448192 DSG2Q14126 1118 aa16.84■□□□□ 0.29
DDX56-207ENST00000448192 PLEKHN1Q494U1 663 aaPredicted RBP16.84■□□□□ 0.29
DDX56-207ENST00000448192 HECTD2Q5U5R9 776 aa16.84■□□□□ 0.29
DDX56-207ENST00000448192 GARNL3Q5VVW2 1013 aa16.84■□□□□ 0.29
DDX56-207ENST00000448192 GALNT7Q86SF2 657 aa16.84■□□□□ 0.29
DDX56-207ENST00000448192 LAPTM4BQ86VI4 370 aa16.84■□□□□ 0.29
DDX56-207ENST00000448192 OR11G2Q8NGC1 345 aa16.84■□□□□ 0.29
DDX56-207ENST00000448192 TM9SF4Q92544 642 aa16.84■□□□□ 0.29
DDX56-207ENST00000448192 LRRC39Q96DD0 335 aa16.84■□□□□ 0.29
DDX56-207ENST00000448192 MVB12AQ96EY5 273 aa16.84■□□□□ 0.29
DDX56-207ENST00000448192 HIST1H2AHQ96KK5 128 aa16.84■□□□□ 0.29
DDX56-207ENST00000448192 KRT12Q99456 494 aa16.84■□□□□ 0.29
DDX56-207ENST00000448192 HIST1H2AJQ99878 128 aa16.84■□□□□ 0.29
DDX56-207ENST00000448192 MESP1Q9BRJ9 268 aa16.84■□□□□ 0.29
DDX56-207ENST00000448192 WDR83Q9BRX9 315 aaKnown RBP16.84■□□□□ 0.29
DDX56-207ENST00000448192 H2AFJQ9BTM1 129 aa16.84■□□□□ 0.29
DDX56-207ENST00000448192 PCBD2Q9H0N5 130 aa16.84■□□□□ 0.29
DDX56-207ENST00000448192 ZBTB20Q9HC78 741 aaPredicted RBP16.84■□□□□ 0.29
DDX56-207ENST00000448192 TMEM184CQ9NVA4 438 aa16.84■□□□□ 0.29
DDX56-207ENST00000448192 B3GNT3Q9Y2A9 372 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms