RNA–Protein interactions for RNA: ENST00000447986.5

ERGIC3-209, Transcript of ERGIC and golgi 3, humanhuman

TSL 1 (best)

Gene ERGIC3, Length 1,632 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-209ENST00000447986 PTBP2Q9UKA9 531 aaKnown RBP12.55□□□□□ -0.4
ERGIC3-209ENST00000447986 SRPK3Q9UPE1 567 aa12.55□□□□□ -0.4
ERGIC3-209ENST00000447986 IGKV1-8A0A0C4DH67 115 aa12.54□□□□□ -0.4
ERGIC3-209ENST00000447986 GOLGA8RI6L899 631 aa12.54□□□□□ -0.4
ERGIC3-209ENST00000447986 MAP2K7O14733 419 aa12.54□□□□□ -0.4
ERGIC3-209ENST00000447986 ZSCAN9O15535 394 aaPredicted RBP12.54□□□□□ -0.4
ERGIC3-209ENST00000447986 TLX3O43711 291 aaPredicted RBP12.54□□□□□ -0.4
ERGIC3-209ENST00000447986 CCNT2O60583 730 aaKnown RBP12.54□□□□□ -0.4
ERGIC3-209ENST00000447986 CTSVO60911 334 aa12.54□□□□□ -0.4
ERGIC3-209ENST00000447986 SMIM24O75264 130 aa12.54□□□□□ -0.4
ERGIC3-209ENST00000447986 KLK3P07288 261 aaPredicted RBP12.54□□□□□ -0.4
ERGIC3-209ENST00000447986 CCNYL3P0C7X3 344 aa12.54□□□□□ -0.4
ERGIC3-209ENST00000447986 CDH1P12830 882 aa12.54□□□□□ -0.4
ERGIC3-209ENST00000447986 EIF2S3P41091 472 aaKnown RBP12.54□□□□□ -0.4
ERGIC3-209ENST00000447986 GDF5P43026 501 aa12.54□□□□□ -0.4
ERGIC3-209ENST00000447986 GABRA4P48169 554 aa12.54□□□□□ -0.4
ERGIC3-209ENST00000447986 KCNC1P48547 511 aa12.54□□□□□ -0.4
ERGIC3-209ENST00000447986 CCT5P48643 541 aa12.54□□□□□ -0.4
ERGIC3-209ENST00000447986 HSPA7P48741 367 aa12.54□□□□□ -0.4
ERGIC3-209ENST00000447986 ALDH18A1P54886 795 aaKnown RBP12.54□□□□□ -0.4
ERGIC3-209ENST00000447986 RPS15AP62244 130 aaKnown RBP12.54□□□□□ -0.4
ERGIC3-209ENST00000447986 YBX1P67809 324 aaKnown RBP12.54□□□□□ -0.4
ERGIC3-209ENST00000447986 MAP7Q14244 749 aa12.54□□□□□ -0.4
ERGIC3-209ENST00000447986 ZXDCQ2QGD7 858 aaPredicted RBP12.54□□□□□ -0.4
ERGIC3-209ENST00000447986 LRRC70Q7Z2Q7 622 aa12.54□□□□□ -0.4
ERGIC3-209ENST00000447986 PAQR7Q86WK9 346 aa12.54□□□□□ -0.4
ERGIC3-209ENST00000447986 KLHDC8AQ8IYD2 350 aa12.54□□□□□ -0.4
ERGIC3-209ENST00000447986 IL22RA1Q8N6P7 574 aa12.54□□□□□ -0.4
ERGIC3-209ENST00000447986 TTC29Q8NA56 475 aaPredicted RBP12.54□□□□□ -0.4
ERGIC3-209ENST00000447986 MZB1Q8WU39 189 aa12.54□□□□□ -0.4
ERGIC3-209ENST00000447986 CLIP3Q96DZ5 547 aa12.54□□□□□ -0.4
ERGIC3-209ENST00000447986 NAF1Q96HR8 494 aaKnown RBP12.54□□□□□ -0.4
ERGIC3-209ENST00000447986 KCNK17Q96T54 332 aa12.54□□□□□ -0.4
ERGIC3-209ENST00000447986 TMEM79Q9BSE2 394 aa12.54□□□□□ -0.4
ERGIC3-209ENST00000447986 NDC1Q9BTX1 674 aa12.54□□□□□ -0.4
ERGIC3-209ENST00000447986 CD244Q9BZW8 370 aa12.54□□□□□ -0.4
ERGIC3-209ENST00000447986 ACTR5Q9H9F9 607 aaPredicted RBP12.54□□□□□ -0.4
ERGIC3-209ENST00000447986 DNAJC11Q9NVH1 559 aa12.54□□□□□ -0.4
ERGIC3-209ENST00000447986 GPRC5BQ9NZH0 403 aa12.54□□□□□ -0.4
ERGIC3-209ENST00000447986 CPSF2Q9P2I0 782 aaKnown RBP12.54□□□□□ -0.4
ERGIC3-209ENST00000447986 XPR1Q9UBH6 696 aa12.54□□□□□ -0.4
ERGIC3-209ENST00000447986 OPTCQ9UBM4 332 aa12.54□□□□□ -0.4
ERGIC3-209ENST00000447986 PILRAQ9UKJ1 303 aa12.54□□□□□ -0.4
ERGIC3-209ENST00000447986 RAXQ9Y2V3 346 aa12.54□□□□□ -0.4
ERGIC3-209ENST00000447986 TNPO3Q9Y5L0 923 aaKnown RBP12.54□□□□□ -0.4
ERGIC3-209ENST00000447986 KIF26BQ2KJY2 2108 aa12.53□□□□□ -0.4
ERGIC3-209ENST00000447986 TXNDC9O14530 226 aa12.53□□□□□ -0.4
ERGIC3-209ENST00000447986 CLGNO14967 610 aa12.53□□□□□ -0.4
ERGIC3-209ENST00000447986 TAPBPO15533 448 aa12.53□□□□□ -0.4
ERGIC3-209ENST00000447986 RAD1O60671 282 aa12.53□□□□□ -0.4
ERGIC3-209ENST00000447986 GLRA3O75311 464 aa12.53□□□□□ -0.4
ERGIC3-209ENST00000447986 TIAF1O95411 115 aa12.53□□□□□ -0.4
ERGIC3-209ENST00000447986 HOXB1P14653 301 aaPredicted RBP12.53□□□□□ -0.4
ERGIC3-209ENST00000447986 TAC1P20366 129 aa12.53□□□□□ -0.4
ERGIC3-209ENST00000447986 CXCR2P25025 360 aa12.53□□□□□ -0.4
ERGIC3-209ENST00000447986 ARSFP54793 590 aa12.53□□□□□ -0.4
ERGIC3-209ENST00000447986 CDC16Q13042 620 aa12.53□□□□□ -0.4
ERGIC3-209ENST00000447986 GRM7Q14831 915 aa12.53□□□□□ -0.4
ERGIC3-209ENST00000447986 PDK4Q16654 411 aa12.53□□□□□ -0.4
ERGIC3-209ENST00000447986 PFKFB4Q16877 469 aa12.53□□□□□ -0.4
ERGIC3-209ENST00000447986 YOD1Q5VVQ6 348 aaPredicted RBP12.53□□□□□ -0.4
ERGIC3-209ENST00000447986 BROXQ5VW32 411 aa12.53□□□□□ -0.4
ERGIC3-209ENST00000447986 C6orf15Q6UXA7 325 aaPredicted RBP12.53□□□□□ -0.4
ERGIC3-209ENST00000447986 TMPRSS11BQ86T26 416 aa12.53□□□□□ -0.4
ERGIC3-209ENST00000447986 CACNA2D3Q8IZS8 1091 aa12.53□□□□□ -0.4
ERGIC3-209ENST00000447986 ZNF655Q8N720 491 aaPredicted RBP12.53□□□□□ -0.4
ERGIC3-209ENST00000447986 SNX31Q8N9S9 440 aa12.53□□□□□ -0.4
ERGIC3-209ENST00000447986 ABHD11Q8NFV4 315 aa12.53□□□□□ -0.4
ERGIC3-209ENST00000447986 NEIL2Q969S2 332 aa12.53□□□□□ -0.4
ERGIC3-209ENST00000447986 THAP11Q96EK4 314 aa12.53□□□□□ -0.4
ERGIC3-209ENST00000447986 OR4K3Q96R72 315 aa12.53□□□□□ -0.4
ERGIC3-209ENST00000447986 TMEM109Q9BVC6 243 aa12.53□□□□□ -0.4
ERGIC3-209ENST00000447986 NLNQ9BYT8 704 aa12.53□□□□□ -0.4
ERGIC3-209ENST00000447986 PELI2Q9HAT8 420 aa12.53□□□□□ -0.4
ERGIC3-209ENST00000447986 TXLNGQ9NUQ3 528 aa12.53□□□□□ -0.4
ERGIC3-209ENST00000447986 ZNF358Q9NW07 568 aa12.53□□□□□ -0.4
ERGIC3-209ENST00000447986 ANGPTL3Q9Y5C1 460 aa12.53□□□□□ -0.4
ERGIC3-209ENST00000447986 ADAMTS20P59510 1910 aa12.53□□□□□ -0.4
ERGIC3-209ENST00000447986 A0A1W2PPM1 405 aa12.52□□□□□ -0.4
ERGIC3-209ENST00000447986 HAT1O14929 419 aa12.52□□□□□ -0.4
ERGIC3-209ENST00000447986 KLK10O43240 276 aa12.52□□□□□ -0.4
ERGIC3-209ENST00000447986 ZNF749O43361 778 aa12.52□□□□□ -0.4
ERGIC3-209ENST00000447986 H2AFYO75367 372 aaKnown RBP12.52□□□□□ -0.4
ERGIC3-209ENST00000447986 DLGAP3O95886 979 aa12.52□□□□□ -0.4
ERGIC3-209ENST00000447986 NTRK1P04629 796 aa12.52□□□□□ -0.4
ERGIC3-209ENST00000447986 EIF2S1P05198 315 aaKnown RBP12.52□□□□□ -0.4
ERGIC3-209ENST00000447986 MTHFD2P13995 350 aa12.52□□□□□ -0.4
ERGIC3-209ENST00000447986 ZNF28P17035 718 aa12.52□□□□□ -0.4
ERGIC3-209ENST00000447986 KRT4P19013 534 aa12.52□□□□□ -0.4
ERGIC3-209ENST00000447986 VSX2P58304 361 aaPredicted RBP12.52□□□□□ -0.4
ERGIC3-209ENST00000447986 CSNK1G2P78368 415 aa12.52□□□□□ -0.4
ERGIC3-209ENST00000447986 SETDB1Q15047 1291 aa12.52□□□□□ -0.4
ERGIC3-209ENST00000447986 FAM214AQ32MH5 1076 aa12.52□□□□□ -0.4
ERGIC3-209ENST00000447986 C18orf21Q32NC0 220 aaPredicted RBP12.52□□□□□ -0.4
ERGIC3-209ENST00000447986 KRT71Q3SY84 523 aa12.52□□□□□ -0.4
ERGIC3-209ENST00000447986 METTL2BQ6P1Q9 378 aaKnown RBP12.52□□□□□ -0.4
ERGIC3-209ENST00000447986 FBXO42Q6P3S6 717 aa12.52□□□□□ -0.4
ERGIC3-209ENST00000447986 DTX1Q86Y01 620 aa12.52□□□□□ -0.4
ERGIC3-209ENST00000447986 GALNT6Q8NCL4 622 aa12.52□□□□□ -0.4
ERGIC3-209ENST00000447986 UBTD2Q8WUN7 234 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms