RNA–Protein interactions for RNA: ENST00000447375.1

SSR4-205, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 427 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-205ENST00000447375 TMTC4Q5T4D3 741 aa11.94□□□□□ -0.5
SSR4-205ENST00000447375 VWA5B1Q5TIE3 1220 aa11.94□□□□□ -0.5
SSR4-205ENST00000447375 FAM45BPQ6NSW5 357 aa11.94□□□□□ -0.5
SSR4-205ENST00000447375 CEP128Q6ZU80 1094 aa11.94□□□□□ -0.5
SSR4-205ENST00000447375 RAB42Q8N4Z0 105 aa11.94□□□□□ -0.5
SSR4-205ENST00000447375 GPATCH11Q8N954 259 aa11.94□□□□□ -0.5
SSR4-205ENST00000447375 LMNTD1Q8N9Z9 388 aa11.94□□□□□ -0.5
SSR4-205ENST00000447375 FAM45AQ8TCE6 357 aa11.94□□□□□ -0.5
SSR4-205ENST00000447375 DENND1AQ8TEH3 1009 aa11.94□□□□□ -0.5
SSR4-205ENST00000447375 IFT81Q8WYA0 676 aa11.94□□□□□ -0.5
SSR4-205ENST00000447375 CDKL2Q92772 493 aa11.94□□□□□ -0.5
SSR4-205ENST00000447375 MR1Q95460 341 aa11.94□□□□□ -0.5
SSR4-205ENST00000447375 OLFM1Q99784 485 aa11.94□□□□□ -0.5
SSR4-205ENST00000447375 CHRNA10Q9GZZ6 450 aa11.94□□□□□ -0.5
SSR4-205ENST00000447375 RHOJQ9H4E5 214 aa11.94□□□□□ -0.5
SSR4-205ENST00000447375 L2HGDHQ9H9P8 463 aa11.94□□□□□ -0.5
SSR4-205ENST00000447375 FGF21Q9NSA1 209 aa11.94□□□□□ -0.5
SSR4-205ENST00000447375 MTRF1LQ9UGC7 380 aaKnown RBP11.94□□□□□ -0.5
SSR4-205ENST00000447375 ANKRD12Q6UB98 2062 aa11.93□□□□□ -0.5
SSR4-205ENST00000447375 A0A0J9YY10 115 aa11.93□□□□□ -0.5
SSR4-205ENST00000447375 KRT87PA6NCN2 255 aa11.93□□□□□ -0.5
SSR4-205ENST00000447375 ISM1B1AKI9 464 aa11.93□□□□□ -0.5
SSR4-205ENST00000447375 MAP3K7O43318 606 aa11.93□□□□□ -0.5
SSR4-205ENST00000447375 ZBTB14O43829 449 aa11.93□□□□□ -0.5
SSR4-205ENST00000447375 TSPAN12O95859 305 aa11.93□□□□□ -0.5
SSR4-205ENST00000447375 EBLN1P0CF75 366 aa11.93□□□□□ -0.5
SSR4-205ENST00000447375 PVRP15151 417 aa11.93□□□□□ -0.5
SSR4-205ENST00000447375 ECHS1P30084 290 aa11.93□□□□□ -0.5
SSR4-205ENST00000447375 PGGT1BP53609 377 aa11.93□□□□□ -0.5
SSR4-205ENST00000447375 IL2P60568 153 aa11.93□□□□□ -0.5
SSR4-205ENST00000447375 TUBB4BP68371 445 aa11.93□□□□□ -0.5
SSR4-205ENST00000447375 TUBB3Q13509 450 aa11.93□□□□□ -0.5
SSR4-205ENST00000447375 KBTBD12Q3ZCT8 623 aa11.93□□□□□ -0.5
SSR4-205ENST00000447375 ZNF517Q6ZMY9 492 aaPredicted RBP11.93□□□□□ -0.5
SSR4-205ENST00000447375 PIWIL4Q7Z3Z4 852 aaKnown RBP11.93□□□□□ -0.5
SSR4-205ENST00000447375 TRIM73Q86UV7 250 aa11.93□□□□□ -0.5
SSR4-205ENST00000447375 C2orf73Q8N5S3 287 aaPredicted RBP11.93□□□□□ -0.5
SSR4-205ENST00000447375 OR8K5Q8NH50 307 aa11.93□□□□□ -0.5
SSR4-205ENST00000447375 DLG3Q92796 817 aa11.93□□□□□ -0.5
SSR4-205ENST00000447375 ZNF501Q96CX3 271 aaPredicted RBP11.93□□□□□ -0.5
SSR4-205ENST00000447375 PDLIM5Q96HC4 596 aaKnown RBP11.93□□□□□ -0.5
SSR4-205ENST00000447375 PKP4Q99569 1192 aa11.93□□□□□ -0.5
SSR4-205ENST00000447375 CPNE1Q99829 537 aa11.93□□□□□ -0.5
SSR4-205ENST00000447375 SYTL2Q9HCH5 934 aa11.93□□□□□ -0.5
SSR4-205ENST00000447375 CHST11Q9NPF2 352 aa11.93□□□□□ -0.5
SSR4-205ENST00000447375 SPATA7Q9P0W8 599 aa11.93□□□□□ -0.5
SSR4-205ENST00000447375 SNX7Q9UNH6 387 aa11.93□□□□□ -0.5
SSR4-205ENST00000447375 PCDHGA10Q9Y5H3 936 aa11.93□□□□□ -0.5
SSR4-205ENST00000447375 FBN3Q75N90 2809 aa11.93□□□□□ -0.5
SSR4-205ENST00000447375 PCSK5Q92824 1860 aa11.93□□□□□ -0.5
SSR4-205ENST00000447375 MDC1Q14676 2089 aaKnown RBP11.93□□□□□ -0.5
SSR4-205ENST00000447375 SVILO95425 2214 aa11.92□□□□□ -0.5
SSR4-205ENST00000447375 FAM95CA0A1B0GW59 222 aa11.92□□□□□ -0.5
SSR4-205ENST00000447375 A0A1W2PPV9 198 aa11.92□□□□□ -0.5
SSR4-205ENST00000447375 SLC16A5O15375 505 aa11.92□□□□□ -0.5
SSR4-205ENST00000447375 ZNF500O60304 480 aaPredicted RBP11.92□□□□□ -0.5
SSR4-205ENST00000447375 FKBP9O95302 570 aa11.92□□□□□ -0.5
SSR4-205ENST00000447375 C8GP07360 202 aa11.92□□□□□ -0.5
SSR4-205ENST00000447375 EDN3P14138 238 aa11.92□□□□□ -0.5
SSR4-205ENST00000447375 STX2P32856 288 aa11.92□□□□□ -0.5
SSR4-205ENST00000447375 GP5P40197 560 aa11.92□□□□□ -0.5
SSR4-205ENST00000447375 TAS2R39P59534 338 aa11.92□□□□□ -0.5
SSR4-205ENST00000447375 PDAP1Q13442 181 aaKnown RBP11.92□□□□□ -0.5
SSR4-205ENST00000447375 NAB1Q13506 487 aa11.92□□□□□ -0.5
SSR4-205ENST00000447375 SF1Q15637 639 aaKnown RBP11.92□□□□□ -0.5
SSR4-205ENST00000447375 GPR19Q15760 415 aa11.92□□□□□ -0.5
SSR4-205ENST00000447375 ZIC1Q15915 447 aa11.92□□□□□ -0.5
SSR4-205ENST00000447375 TMEM207Q6UWW9 146 aa11.92□□□□□ -0.5
SSR4-205ENST00000447375 IGFL3Q6UXB1 125 aa11.92□□□□□ -0.5
SSR4-205ENST00000447375 CDHR3Q6ZTQ4 885 aa11.92□□□□□ -0.5
SSR4-205ENST00000447375 UBE2R2Q712K3 238 aaPredicted RBP11.92□□□□□ -0.5
SSR4-205ENST00000447375 IFT20Q8IY31 132 aa11.92□□□□□ -0.5
SSR4-205ENST00000447375 ENDOVQ8N8Q3 282 aaKnown RBP11.92□□□□□ -0.5
SSR4-205ENST00000447375 OR2A1Q8NGT9 310 aa11.92□□□□□ -0.5
SSR4-205ENST00000447375 FBF1Q8TES7 1133 aa11.92□□□□□ -0.5
SSR4-205ENST00000447375 LINGO1Q96FE5 620 aa11.92□□□□□ -0.5
SSR4-205ENST00000447375 VPS39Q96JC1 886 aa11.92□□□□□ -0.5
SSR4-205ENST00000447375 FMO2Q99518 471 aa11.92□□□□□ -0.5
SSR4-205ENST00000447375 RBBP8Q99708 897 aa11.92□□□□□ -0.5
SSR4-205ENST00000447375 TRIM8Q9BZR9 551 aa11.92□□□□□ -0.5
SSR4-205ENST00000447375 KLHL25Q9H0H3 589 aa11.92□□□□□ -0.5
SSR4-205ENST00000447375 PARVBQ9HBI1 364 aa11.92□□□□□ -0.5
SSR4-205ENST00000447375 FAM60AQ9NP50 221 aa11.92□□□□□ -0.5
SSR4-205ENST00000447375 SOHLH2Q9NX45 425 aa11.92□□□□□ -0.5
SSR4-205ENST00000447375 TXNDC16Q9P2K2 825 aa11.92□□□□□ -0.5
SSR4-205ENST00000447375 MTO1Q9Y2Z2 717 aaKnown RBP11.92□□□□□ -0.5
SSR4-205ENST00000447375 KLK4Q9Y5K2 254 aa11.92□□□□□ -0.5
SSR4-205ENST00000447375 DIDO1Q9BTC0 2240 aaKnown RBP11.92□□□□□ -0.5
SSR4-205ENST00000447375 CPNE3O75131 537 aaKnown RBP11.91□□□□□ -0.5
SSR4-205ENST00000447375 NADKO95544 446 aaPredicted RBP11.91□□□□□ -0.5
SSR4-205ENST00000447375 SLC16A8O95907 504 aa11.91□□□□□ -0.5
SSR4-205ENST00000447375 ALPPP05187 535 aa11.91□□□□□ -0.5
SSR4-205ENST00000447375 STSP08842 583 aa11.91□□□□□ -0.5
SSR4-205ENST00000447375 CAPN3P20807 821 aa11.91□□□□□ -0.5
SSR4-205ENST00000447375 HTR1EP28566 365 aa11.91□□□□□ -0.5
SSR4-205ENST00000447375 GABRA4P48169 554 aa11.91□□□□□ -0.5
SSR4-205ENST00000447375 PNLIPRP1P54315 467 aa11.91□□□□□ -0.5
SSR4-205ENST00000447375 POU4F1Q01851 419 aa11.91□□□□□ -0.5
SSR4-205ENST00000447375 SP140Q13342 867 aa11.91□□□□□ -0.5
SSR4-205ENST00000447375 FASTKQ14296 549 aaKnown RBP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms