RNA–Protein interactions for RNA: ENST00000447232.6

PMS1-215, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-215ENST00000447232 BTN3A3O00478 584 aa3.06□□□□□ -1.92
PMS1-215ENST00000447232 AURKAO14965 403 aa3.06□□□□□ -1.92
PMS1-215ENST00000447232 MED7O43513 233 aa3.06□□□□□ -1.92
PMS1-215ENST00000447232 PALMO75781 387 aa3.06□□□□□ -1.92
PMS1-215ENST00000447232 UQCRHP07919 91 aa3.06□□□□□ -1.92
PMS1-215ENST00000447232 CTPS1P17812 591 aa3.06□□□□□ -1.92
PMS1-215ENST00000447232 SRD5A1P18405 259 aa3.06□□□□□ -1.92
PMS1-215ENST00000447232 HLA-DPA1P20036 260 aa3.06□□□□□ -1.92
PMS1-215ENST00000447232 FLT3P36888 993 aa3.06□□□□□ -1.92
PMS1-215ENST00000447232 MC3RP41968 323 aa3.06□□□□□ -1.92
PMS1-215ENST00000447232 PRKAA1Q13131 559 aa3.06□□□□□ -1.92
PMS1-215ENST00000447232 PTPN20Q4JDL3 420 aa3.06□□□□□ -1.92
PMS1-215ENST00000447232 POMZP3Q6PJE2 187 aa3.06□□□□□ -1.92
PMS1-215ENST00000447232 UNC5DQ6UXZ4 953 aa3.06□□□□□ -1.92
PMS1-215ENST00000447232 DNM1P46Q6ZS02 220 aa3.06□□□□□ -1.92
PMS1-215ENST00000447232 NLRP9Q7RTR0 991 aa3.06□□□□□ -1.92
PMS1-215ENST00000447232 OTOAQ7RTW8 1153 aa3.06□□□□□ -1.92
PMS1-215ENST00000447232 GGNQ86UU5 652 aa3.06□□□□□ -1.92
PMS1-215ENST00000447232 KIF18BQ86Y91 864 aa3.06□□□□□ -1.92
PMS1-215ENST00000447232 ZDHHC17Q8IUH5 632 aa3.06□□□□□ -1.92
PMS1-215ENST00000447232 C3orf56Q8N813 242 aa3.06□□□□□ -1.92
PMS1-215ENST00000447232 POGLUT1Q8NBL1 392 aa3.06□□□□□ -1.92
PMS1-215ENST00000447232 C16orf52Q8NHV5 167 aa3.06□□□□□ -1.92
PMS1-215ENST00000447232 SLC20A1Q8WUM9 679 aa3.06□□□□□ -1.92
PMS1-215ENST00000447232 DLG3Q92796 817 aa3.06□□□□□ -1.92
PMS1-215ENST00000447232 LRRC46Q96FV0 321 aa3.06□□□□□ -1.92
PMS1-215ENST00000447232 C1orf159Q96HA4 380 aa3.06□□□□□ -1.92
PMS1-215ENST00000447232 DACH2Q96NX9 599 aa3.06□□□□□ -1.92
PMS1-215ENST00000447232 EIF3CQ99613 913 aaKnown RBP3.06□□□□□ -1.92
PMS1-215ENST00000447232 UTP23Q9BRU9 249 aaKnown RBP3.06□□□□□ -1.92
PMS1-215ENST00000447232 CINPQ9BW66 212 aaPredicted RBP3.06□□□□□ -1.92
PMS1-215ENST00000447232 SHARPINQ9H0F6 387 aa3.06□□□□□ -1.92
PMS1-215ENST00000447232 ATG10Q9H0Y0 220 aa3.06□□□□□ -1.92
PMS1-215ENST00000447232 BLZF1Q9H2G9 400 aa3.06□□□□□ -1.92
PMS1-215ENST00000447232 ANKRD10Q9NXR5 420 aa3.06□□□□□ -1.92
PMS1-215ENST00000447232 WHRNQ9P202 907 aa3.06□□□□□ -1.92
PMS1-215ENST00000447232 C3orf18Q9UK00 162 aa3.06□□□□□ -1.92
PMS1-215ENST00000447232 MED12Q93074 2177 aa3.06□□□□□ -1.92
PMS1-215ENST00000447232 HEATR5AQ86XA9 2040 aa3.06□□□□□ -1.92
PMS1-215ENST00000447232 IGLV3-12A0A075B6K2 115 aa3.06□□□□□ -1.92
PMS1-215ENST00000447232 A0A0J9YYE9 177 aa3.06□□□□□ -1.92
PMS1-215ENST00000447232 SH3D21A4FU49 640 aa3.06□□□□□ -1.92
PMS1-215ENST00000447232 KDM4EB2RXH2 506 aaPredicted RBP3.06□□□□□ -1.92
PMS1-215ENST00000447232 FAM47E-STBD1D6RA91 191 aa3.06□□□□□ -1.92
PMS1-215ENST00000447232 BTN3A1O00481 513 aa3.06□□□□□ -1.92
PMS1-215ENST00000447232 TFECO14948 347 aaPredicted RBP3.06□□□□□ -1.92
PMS1-215ENST00000447232 DSCR3O14972 297 aa3.06□□□□□ -1.92
PMS1-215ENST00000447232 HS6ST1O60243 411 aa3.06□□□□□ -1.92
PMS1-215ENST00000447232 CDC40O60508 579 aaKnown RBP eCLIP3.06□□□□□ -1.92
PMS1-215ENST00000447232 KCNJ13O60928 360 aa3.06□□□□□ -1.92
PMS1-215ENST00000447232 LETM1O95202 739 aaPredicted RBP3.06□□□□□ -1.92
PMS1-215ENST00000447232 TRBC1P01850 177 aa3.06□□□□□ -1.92
PMS1-215ENST00000447232 PDHA1P08559 390 aa3.06□□□□□ -1.92
PMS1-215ENST00000447232 ICAM2P13598 275 aa3.06□□□□□ -1.92
PMS1-215ENST00000447232 CYLC1P35663 651 aaPredicted RBP3.06□□□□□ -1.92
PMS1-215ENST00000447232 SPINT3P49223 89 aa3.06□□□□□ -1.92
PMS1-215ENST00000447232 ARSFP54793 590 aa3.06□□□□□ -1.92
PMS1-215ENST00000447232 VSX2P58304 361 aaPredicted RBP3.06□□□□□ -1.92
PMS1-215ENST00000447232 DSC2Q02487 901 aa3.06□□□□□ -1.92
PMS1-215ENST00000447232 GCNT1Q02742 428 aa3.06□□□□□ -1.92
PMS1-215ENST00000447232 EEF1A2Q05639 463 aaKnown RBP3.06□□□□□ -1.92
PMS1-215ENST00000447232 CUL4BQ13620 913 aa3.06□□□□□ -1.92
PMS1-215ENST00000447232 FASTKQ14296 549 aaKnown RBP3.06□□□□□ -1.92
PMS1-215ENST00000447232 MESDQ14696 234 aa3.06□□□□□ -1.92
PMS1-215ENST00000447232 RFTN1Q14699 578 aaPredicted RBP3.06□□□□□ -1.92
PMS1-215ENST00000447232 CLEC12BQ2HXU8 276 aa3.06□□□□□ -1.92
PMS1-215ENST00000447232 KHDC1Q4VXA5 237 aaKnown RBP3.06□□□□□ -1.92
PMS1-215ENST00000447232 ZCWPW2Q504Y3 356 aa3.06□□□□□ -1.92
PMS1-215ENST00000447232 ACAD10Q6JQN1 1059 aa3.06□□□□□ -1.92
PMS1-215ENST00000447232 FAM83HQ6ZRV2 1179 aaPredicted RBP3.06□□□□□ -1.92
PMS1-215ENST00000447232 STRADAQ7RTN6 431 aa3.06□□□□□ -1.92
PMS1-215ENST00000447232 ZNF227Q86WZ6 799 aa3.06□□□□□ -1.92
PMS1-215ENST00000447232 PPM1KQ8N3J5 372 aa3.06□□□□□ -1.92
PMS1-215ENST00000447232 DNAJC22Q8N4W6 341 aa3.06□□□□□ -1.92
PMS1-215ENST00000447232 C19orf47Q8N9M1 422 aaKnown RBP3.06□□□□□ -1.92
PMS1-215ENST00000447232 ADCY4Q8NFM4 1077 aa3.06□□□□□ -1.92
PMS1-215ENST00000447232 OR4E2Q8NGC2 313 aa3.06□□□□□ -1.92
PMS1-215ENST00000447232 LMO3Q8TAP4 145 aa3.06□□□□□ -1.92
PMS1-215ENST00000447232 SLC22A8Q8TCC7 542 aa3.06□□□□□ -1.92
PMS1-215ENST00000447232 STT3BQ8TCJ2 826 aa3.06□□□□□ -1.92
PMS1-215ENST00000447232 GPT2Q8TD30 523 aa3.06□□□□□ -1.92
PMS1-215ENST00000447232 N4BP2L2Q92802 583 aaPredicted RBP3.06□□□□□ -1.92
PMS1-215ENST00000447232 ZNF354BQ96LW1 612 aa3.06□□□□□ -1.92
PMS1-215ENST00000447232 ZNF700Q9H0M5 742 aa3.06□□□□□ -1.92
PMS1-215ENST00000447232 FAM83DQ9H4H8 585 aa3.06□□□□□ -1.92
PMS1-215ENST00000447232 MAGEF1Q9HAY2 307 aa3.06□□□□□ -1.92
PMS1-215ENST00000447232 NOD2Q9HC29 1040 aa3.06□□□□□ -1.92
PMS1-215ENST00000447232 ACP6Q9NPH0 428 aa3.06□□□□□ -1.92
PMS1-215ENST00000447232 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.06□□□□□ -1.92
PMS1-215ENST00000447232 IMP3Q9NV31 184 aaKnown RBP3.06□□□□□ -1.92
PMS1-215ENST00000447232 PCDHB10Q9UN67 800 aa3.06□□□□□ -1.92
PMS1-215ENST00000447232 SNRNP200O75643 2136 aaKnown RBP3.05□□□□□ -1.92
PMS1-215ENST00000447232 RYR2Q92736 4967 aa3.05□□□□□ -1.92
PMS1-215ENST00000447232 A0A096LNT2 108 aa3.05□□□□□ -1.92
PMS1-215ENST00000447232 HYKKA2RU49 373 aa3.05□□□□□ -1.92
PMS1-215ENST00000447232 GTPBP10A4D1E9 387 aaKnown RBP3.05□□□□□ -1.92
PMS1-215ENST00000447232 RGSL1A5PLK6 1076 aa3.05□□□□□ -1.92
PMS1-215ENST00000447232 PMM2O15305 246 aa3.05□□□□□ -1.92
PMS1-215ENST00000447232 GPRIN2O60269 458 aa3.05□□□□□ -1.92
PMS1-215ENST00000447232 TMCC2O75069 709 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms