RNA–Protein interactions for RNA: ENST00000442515.5

LINC00642-202, long intergenic non-protein coding RNA 642, humanhuman

TSL 3 BASIC

Gene LINC00642, Length 670 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-202ENST00000442515 SYNPO2LQ9H987 977 aa13.16□□□□□ -0.3
LINC00642-202ENST00000442515 NLE1Q9NVX2 485 aaPredicted RBP13.16□□□□□ -0.3
LINC00642-202ENST00000442515 DDX56Q9NY93 547 aaKnown RBP13.16□□□□□ -0.3
LINC00642-202ENST00000442515 AAR2Q9Y312 384 aaKnown RBP13.16□□□□□ -0.3
LINC00642-202ENST00000442515 A0A1B0GTH9 108 aa13.15□□□□□ -0.3
LINC00642-202ENST00000442515 KRT87PA6NCN2 255 aa13.15□□□□□ -0.3
LINC00642-202ENST00000442515 HACD1B0YJ81 288 aa13.15□□□□□ -0.3
LINC00642-202ENST00000442515 KLK8O60259 260 aa13.15□□□□□ -0.3
LINC00642-202ENST00000442515 SLC25A12O75746 678 aa13.15□□□□□ -0.3
LINC00642-202ENST00000442515 RBL1P28749 1068 aa13.15□□□□□ -0.3
LINC00642-202ENST00000442515 CCR7P32248 378 aa13.15□□□□□ -0.3
LINC00642-202ENST00000442515 DGKQP52824 942 aa13.15□□□□□ -0.3
LINC00642-202ENST00000442515 HSPA14Q0VDF9 509 aa13.15□□□□□ -0.3
LINC00642-202ENST00000442515 SPARCL1Q14515 664 aa13.15□□□□□ -0.3
LINC00642-202ENST00000442515 MAPKAPK3Q16644 382 aa13.15□□□□□ -0.3
LINC00642-202ENST00000442515 UNC5DQ6UXZ4 953 aa13.15□□□□□ -0.3
LINC00642-202ENST00000442515 CLYBLQ8N0X4 340 aa13.15□□□□□ -0.3
LINC00642-202ENST00000442515 WFDC11Q8NEX6 87 aa13.15□□□□□ -0.3
LINC00642-202ENST00000442515 ARSGQ96EG1 525 aa13.15□□□□□ -0.3
LINC00642-202ENST00000442515 CDKN2AIPNLQ96HQ2 116 aa13.15□□□□□ -0.3
LINC00642-202ENST00000442515 SEC16BQ96JE7 1060 aa13.15□□□□□ -0.3
LINC00642-202ENST00000442515 OLFM1Q99784 485 aa13.15□□□□□ -0.3
LINC00642-202ENST00000442515 TBL1YQ9BQ87 522 aa13.15□□□□□ -0.3
LINC00642-202ENST00000442515 GPATCH1Q9BRR8 931 aaKnown RBP13.15□□□□□ -0.3
LINC00642-202ENST00000442515 CLEC4MQ9H2X3 399 aaPredicted RBP13.15□□□□□ -0.3
LINC00642-202ENST00000442515 LRFN1Q9P244 771 aa13.15□□□□□ -0.3
LINC00642-202ENST00000442515 L3MBTL1Q9Y468 752 aa13.15□□□□□ -0.3
LINC00642-202ENST00000442515 ANK3Q12955 4377 aaKnown RBP13.14□□□□□ -0.31
LINC00642-202ENST00000442515 STAB1Q9NY15 2570 aa13.14□□□□□ -0.31
LINC00642-202ENST00000442515 FBN1P35555 2871 aaKnown RBP13.14□□□□□ -0.31
LINC00642-202ENST00000442515 A0A0A6YYC8 382 aaPredicted RBP13.14□□□□□ -0.31
LINC00642-202ENST00000442515 A0A0U1RQJ8 604 aa13.14□□□□□ -0.31
LINC00642-202ENST00000442515 OR2A25A4D2G3 310 aa13.14□□□□□ -0.31
LINC00642-202ENST00000442515 OR51F1A6NGY5 319 aa13.14□□□□□ -0.31
LINC00642-202ENST00000442515 I3L1I5 382 aaPredicted RBP13.14□□□□□ -0.31
LINC00642-202ENST00000442515 FOXS1O43638 330 aa13.14□□□□□ -0.31
LINC00642-202ENST00000442515 NME2P1O60361 137 aa13.14□□□□□ -0.31
LINC00642-202ENST00000442515 OR1I1O60431 355 aa13.14□□□□□ -0.31
LINC00642-202ENST00000442515 NME2P22392 152 aa13.14□□□□□ -0.31
LINC00642-202ENST00000442515 MSNP26038 577 aaKnown RBP13.14□□□□□ -0.31
LINC00642-202ENST00000442515 YBX1P67809 324 aaKnown RBP13.14□□□□□ -0.31
LINC00642-202ENST00000442515 ZNF468Q5VIY5 522 aaPredicted RBP13.14□□□□□ -0.31
LINC00642-202ENST00000442515 FBXO42Q6P3S6 717 aa13.14□□□□□ -0.31
LINC00642-202ENST00000442515 LRRC8BQ6P9F7 803 aa13.14□□□□□ -0.31
LINC00642-202ENST00000442515 ZZZ3Q8IYH5 903 aa13.14□□□□□ -0.31
LINC00642-202ENST00000442515 ARHGEF39Q8N4T4 335 aa13.14□□□□□ -0.31
LINC00642-202ENST00000442515 SLC5A8Q8N695 610 aa13.14□□□□□ -0.31
LINC00642-202ENST00000442515 OR2A1Q8NGT9 310 aa13.14□□□□□ -0.31
LINC00642-202ENST00000442515 LKAAEAR1Q8TD35 194 aa13.14□□□□□ -0.31
LINC00642-202ENST00000442515 C18orf12Q96KH6 178 aa13.14□□□□□ -0.31
LINC00642-202ENST00000442515 DRC3Q9H069 523 aa13.14□□□□□ -0.31
LINC00642-202ENST00000442515 TP63Q9H3D4 680 aaPredicted RBP13.14□□□□□ -0.31
LINC00642-202ENST00000442515 C19orf25Q9UFG5 118 aaPredicted RBP13.14□□□□□ -0.31
LINC00642-202ENST00000442515 FEZ2Q9UHY8 353 aaPredicted RBP13.14□□□□□ -0.31
LINC00642-202ENST00000442515 HYOU1Q9Y4L1 999 aa13.14□□□□□ -0.31
LINC00642-202ENST00000442515 TFECO14948 347 aaPredicted RBP13.13□□□□□ -0.31
LINC00642-202ENST00000442515 VPS26AO75436 327 aa13.13□□□□□ -0.31
LINC00642-202ENST00000442515 GPC4O75487 556 aa13.13□□□□□ -0.31
LINC00642-202ENST00000442515 TMEM253P0C7T8 217 aa13.13□□□□□ -0.31
LINC00642-202ENST00000442515 ADSLP30566 484 aaPredicted RBP13.13□□□□□ -0.31
LINC00642-202ENST00000442515 FOXN2P32314 431 aa13.13□□□□□ -0.31
LINC00642-202ENST00000442515 BDKRB1P46663 353 aa13.13□□□□□ -0.31
LINC00642-202ENST00000442515 PRPSAP1Q14558 356 aa13.13□□□□□ -0.31
LINC00642-202ENST00000442515 MINDY4Q4G0A6 757 aa13.13□□□□□ -0.31
LINC00642-202ENST00000442515 MFSD4BQ5TF39 518 aa13.13□□□□□ -0.31
LINC00642-202ENST00000442515 GARNL3Q5VVW2 1013 aa13.13□□□□□ -0.31
LINC00642-202ENST00000442515 CLEC9AQ6UXN8 241 aa13.13□□□□□ -0.31
LINC00642-202ENST00000442515 SHISA5Q8N114 240 aa13.13□□□□□ -0.31
LINC00642-202ENST00000442515 SPATA3Q8NHX4 192 aa13.13□□□□□ -0.31
LINC00642-202ENST00000442515 HMGCLL1Q8TB92 370 aa13.13□□□□□ -0.31
LINC00642-202ENST00000442515 SLC35G2Q8TBE7 412 aa13.13□□□□□ -0.31
LINC00642-202ENST00000442515 MBD6Q96DN6 1003 aa13.13□□□□□ -0.31
LINC00642-202ENST00000442515 PWWP2AQ96N64 755 aa13.13□□□□□ -0.31
LINC00642-202ENST00000442515 CYTH2Q99418 400 aa13.13□□□□□ -0.31
LINC00642-202ENST00000442515 DPH7Q9BTV6 452 aa13.13□□□□□ -0.31
LINC00642-202ENST00000442515 ARNT2Q9HBZ2 717 aa13.13□□□□□ -0.31
LINC00642-202ENST00000442515 MMP25Q9NPA2 562 aa13.13□□□□□ -0.31
LINC00642-202ENST00000442515 hCG_1818297A0A087WSY0 165 aa13.12□□□□□ -0.31
LINC00642-202ENST00000442515 A0A1W2PPV9 198 aa13.12□□□□□ -0.31
LINC00642-202ENST00000442515 H7C0C1 242 aa13.12□□□□□ -0.31
LINC00642-202ENST00000442515 CDC40O60508 579 aaKnown RBP eCLIP13.12□□□□□ -0.31
LINC00642-202ENST00000442515 CYC1P08574 325 aa13.12□□□□□ -0.31
LINC00642-202ENST00000442515 INHBBP09529 407 aa13.12□□□□□ -0.31
LINC00642-202ENST00000442515 ATP5OP48047 213 aa13.12□□□□□ -0.31
LINC00642-202ENST00000442515 DLX5P56178 289 aa13.12□□□□□ -0.31
LINC00642-202ENST00000442515 NUP107P57740 925 aa13.12□□□□□ -0.31
LINC00642-202ENST00000442515 ZBED6P86452 979 aa13.12□□□□□ -0.31
LINC00642-202ENST00000442515 PMPCAQ10713 525 aa13.12□□□□□ -0.31
LINC00642-202ENST00000442515 NAA25Q14CX7 972 aa13.12□□□□□ -0.31
LINC00642-202ENST00000442515 EXT1Q16394 746 aa13.12□□□□□ -0.31
LINC00642-202ENST00000442515 CCSMST1Q4G0I0 132 aa13.12□□□□□ -0.31
LINC00642-202ENST00000442515 CXXC5Q7LFL8 322 aaKnown RBP13.12□□□□□ -0.31
LINC00642-202ENST00000442515 ANKRD37Q7Z713 158 aa13.12□□□□□ -0.31
LINC00642-202ENST00000442515 CCDC50Q8IVM0 306 aa13.12□□□□□ -0.31
LINC00642-202ENST00000442515 LGI4Q8N135 537 aa13.12□□□□□ -0.31
LINC00642-202ENST00000442515 RAB42Q8N4Z0 105 aa13.12□□□□□ -0.31
LINC00642-202ENST00000442515 M1APQ8TC57 530 aa13.12□□□□□ -0.31
LINC00642-202ENST00000442515 STYXQ8WUJ0 223 aa13.12□□□□□ -0.31
LINC00642-202ENST00000442515 NUDT8Q8WV74 236 aa13.12□□□□□ -0.31
LINC00642-202ENST00000442515 ASZ1Q8WWH4 475 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms