RNA–Protein interactions for RNA: ENST00000442234.5

LIG4-203, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 3,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-203ENST00000442234 A0A1W2PPL8 197 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 M0R233 179 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 KLF11O14901 512 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 INPP4BO15327 924 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 KLRC4O43908 158 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 PLOD3O60568 738 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 TADA2AO75478 443 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 RECQL5O94762 991 aaPredicted RBP2.7□□□□□ -1.98
LIG4-203ENST00000442234 FTH1P02794 183 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 CYP11A1P05108 521 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 SERPINE1P05121 402 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 C2P06681 752 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 RALAP11233 206 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 CAPN3P20807 821 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 FPR3P25089 353 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 CD6P30203 668 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 RPS5P46782 204 aaKnown RBP2.7□□□□□ -1.98
LIG4-203ENST00000442234 CASP4P49662 377 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 P2RY4P51582 365 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 JAM2P57087 298 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 NKX3-2P78367 333 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 MPP1Q00013 466 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 GLO1Q04760 184 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 ORC1Q13415 861 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 ALCAMQ13740 583 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 GRB14Q14449 540 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 PPA1Q15181 289 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 NTRK3Q16288 839 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 SNAPC1Q16533 368 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 OCLNQ16625 522 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 CYP51A1Q16850 503 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 CLEC16AQ2KHT3 1053 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 NHSL2Q5HYW2 709 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 SAMD4BQ5PRF9 694 aaKnown RBP2.7□□□□□ -1.98
LIG4-203ENST00000442234 RBM48Q5RL73 367 aaKnown RBP2.7□□□□□ -1.98
LIG4-203ENST00000442234 GLYATQ6IB77 296 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 MZT2BQ6NZ67 158 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 C1orf94Q6P1W5 598 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 DENND1BQ6P3S1 775 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 FAM171BQ6P995 826 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 RHBDF2Q6PJF5 856 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 C16orf54Q6UWD8 224 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 NAPRTQ6XQN6 538 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 IRF2BP2Q7Z5L9 587 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 RIOX2Q8IUF8 465 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 TMEM132CQ8N3T6 1108 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 KIAA0895Q8NCT3 520 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 PPHLN1Q8NEY8 458 aaKnown RBP2.7□□□□□ -1.98
LIG4-203ENST00000442234 RDM1Q8NG50 284 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 BLOC1S5Q8TDH9 187 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 GPR152Q8TDT2 470 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 ASB9Q96DX5 294 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 MEGF10Q96KG7 1140 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 LINC00052Q96N35 136 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 CAMK1GQ96NX5 476 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 MUS81Q96NY9 551 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 NEDD4LQ96PU5 975 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 OR52B2Q96RD2 323 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 AGAP2Q99490 1192 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 SEPHS2Q99611 448 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 MAP3K3Q99759 626 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 DPYSL5Q9BPU6 564 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 OPN3Q9H1Y3 402 aaPredicted RBP2.7□□□□□ -1.98
LIG4-203ENST00000442234 MED28Q9H204 178 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 PIF1Q9H611 641 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 ASB7Q9H672 318 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 ACSS3Q9H6R3 686 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 NMUR1Q9HB89 426 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 GLOD4Q9HC38 313 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 GPRC5CQ9NQ84 441 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 KLHL1Q9NR64 748 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 FAM49BQ9NUQ9 324 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 TBC1D13Q9NVG8 400 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 SDHAF2Q9NX18 166 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 RAB20Q9NX57 234 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 PPP4R1LQ9P1A2 415 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 MYEF2Q9P2K5 600 aaKnown RBP2.7□□□□□ -1.98
LIG4-203ENST00000442234 AASSQ9UDR5 926 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 NDRG3Q9UGV2 375 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 TRHDEQ9UKU6 1024 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 CLCA2Q9UQC9 943 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 TPRKBQ9Y3C4 175 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 CSNK1G3Q9Y6M4 447 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 FRYQ5TBA9 3013 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 IGSF9BQ9UPX0 1349 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 COL5A3P25940 1745 aaPredicted RBP2.7□□□□□ -1.98
LIG4-203ENST00000442234 LTN1O94822 1766 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 CFAP46Q8IYW2 2715 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 A0A0A6YYJ9 748 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 PRAMEF33A0A0G2JMD5 474 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 MFSD2BA6NFX1 497 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 DISC1C4P0D8 188 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 PRR23D1E9PI22 279 aaPredicted RBP2.7□□□□□ -1.98
LIG4-203ENST00000442234 KPNA3O00505 521 aaPredicted RBP2.7□□□□□ -1.98
LIG4-203ENST00000442234 ADAM12O43184 909 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 HSPA12AO43301 675 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 SIGLEC6O43699 453 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 SSX4O60224 188 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 HPGDSO60760 199 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 PRAMEF10O60809 474 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms