RNA–Protein interactions for RNA: ENST00000441580.5

CPSF4-206, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2 BASIC

Gene CPSF4, Length 942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-206ENST00000441580 C11orf24Q96F05 449 aaPredicted RBP12.71□□□□□ -0.37
CPSF4-206ENST00000441580 NSMCE2Q96MF7 247 aa12.71□□□□□ -0.37
CPSF4-206ENST00000441580 TMEM74Q96NL1 305 aa12.71□□□□□ -0.37
CPSF4-206ENST00000441580 GBP5Q96PP8 586 aa12.71□□□□□ -0.37
CPSF4-206ENST00000441580 OR2M4Q96R27 311 aa12.71□□□□□ -0.37
CPSF4-206ENST00000441580 CPPED1Q9BRF8 314 aaPredicted RBP12.71□□□□□ -0.37
CPSF4-206ENST00000441580 EBPLQ9BY08 206 aa12.71□□□□□ -0.37
CPSF4-206ENST00000441580 WASH6PQ9NQA3 447 aa12.71□□□□□ -0.37
CPSF4-206ENST00000441580 GEMIN8Q9NWZ8 242 aaKnown RBP12.71□□□□□ -0.37
CPSF4-206ENST00000441580 CIDEBQ9UHD4 219 aa12.71□□□□□ -0.37
CPSF4-206ENST00000441580 EGFL7Q9UHF1 273 aa12.71□□□□□ -0.37
CPSF4-206ENST00000441580 ANAPC2Q9UJX6 822 aa12.71□□□□□ -0.37
CPSF4-206ENST00000441580 PRKAB1Q9Y478 270 aa12.71□□□□□ -0.37
CPSF4-206ENST00000441580 PCYT1BQ9Y5K3 369 aaPredicted RBP12.71□□□□□ -0.37
CPSF4-206ENST00000441580 HEBP2Q9Y5Z4 205 aa12.71□□□□□ -0.37
CPSF4-206ENST00000441580 PRR23AA6NEV1 266 aa12.7□□□□□ -0.38
CPSF4-206ENST00000441580 LRRC72A6NJI9 287 aa12.7□□□□□ -0.38
CPSF4-206ENST00000441580 PCDH7O60245 1069 aa12.7□□□□□ -0.38
CPSF4-206ENST00000441580 DFNA5O60443 496 aa12.7□□□□□ -0.38
CPSF4-206ENST00000441580 SEMA3DO95025 777 aa12.7□□□□□ -0.38
CPSF4-206ENST00000441580 ANXA6P08133 673 aa12.7□□□□□ -0.38
CPSF4-206ENST00000441580 UQCRBP14927 111 aa12.7□□□□□ -0.38
CPSF4-206ENST00000441580 DDX5P17844 614 aaKnown RBP12.7□□□□□ -0.38
CPSF4-206ENST00000441580 GGT1P19440 569 aa12.7□□□□□ -0.38
CPSF4-206ENST00000441580 TACR1P25103 407 aa12.7□□□□□ -0.38
CPSF4-206ENST00000441580 CLCNKAP51800 687 aa12.7□□□□□ -0.38
CPSF4-206ENST00000441580 RPS13P62277 151 aaKnown RBP12.7□□□□□ -0.38
CPSF4-206ENST00000441580 REEP5Q00765 189 aa12.7□□□□□ -0.38
CPSF4-206ENST00000441580 ZNF763Q0D2J5 394 aa12.7□□□□□ -0.38
CPSF4-206ENST00000441580 CYP51A1Q16850 503 aa12.7□□□□□ -0.38
CPSF4-206ENST00000441580 SFT2D3Q587I9 215 aa12.7□□□□□ -0.38
CPSF4-206ENST00000441580 RUNDC3AQ59EK9 446 aa12.7□□□□□ -0.38
CPSF4-206ENST00000441580 CAPRIN2Q6IMN6 1127 aaKnown RBP12.7□□□□□ -0.38
CPSF4-206ENST00000441580 KIAA1324Q6UXG2 1013 aaKnown RBP12.7□□□□□ -0.38
CPSF4-206ENST00000441580 IFNEQ86WN2 208 aa12.7□□□□□ -0.38
CPSF4-206ENST00000441580 ADGRG5Q8IZF4 528 aa12.7□□□□□ -0.38
CPSF4-206ENST00000441580 LILRA2Q8N149 483 aa12.7□□□□□ -0.38
CPSF4-206ENST00000441580 C1orf52Q8N6N3 182 aaKnown RBP12.7□□□□□ -0.38
CPSF4-206ENST00000441580 PACRGLQ8N7B6 248 aa12.7□□□□□ -0.38
CPSF4-206ENST00000441580 ANKFN1Q8N957 763 aa12.7□□□□□ -0.38
CPSF4-206ENST00000441580 ZNF548Q8NEK5 533 aaPredicted RBP12.7□□□□□ -0.38
CPSF4-206ENST00000441580 SPDYE1Q8NFV5 336 aaPredicted RBP12.7□□□□□ -0.38
CPSF4-206ENST00000441580 OR8J2Q8NGG1 315 aa12.7□□□□□ -0.38
CPSF4-206ENST00000441580 CHTF18Q8WVB6 975 aa12.7□□□□□ -0.38
CPSF4-206ENST00000441580 SLCO4A1Q96BD0 722 aa12.7□□□□□ -0.38
CPSF4-206ENST00000441580 SCARF2Q96GP6 870 aaPredicted RBP12.7□□□□□ -0.38
CPSF4-206ENST00000441580 PRPF18Q99633 342 aaKnown RBP12.7□□□□□ -0.38
CPSF4-206ENST00000441580 AIF1LQ9BQI0 150 aa12.7□□□□□ -0.38
CPSF4-206ENST00000441580 APOOQ9BUR5 198 aa12.7□□□□□ -0.38
CPSF4-206ENST00000441580 PAIP1Q9H074 479 aaKnown RBP12.7□□□□□ -0.38
CPSF4-206ENST00000441580 OSGEPL1Q9H4B0 414 aa12.7□□□□□ -0.38
CPSF4-206ENST00000441580 MVB12BQ9H7P6 319 aa12.7□□□□□ -0.38
CPSF4-206ENST00000441580 VAPAQ9P0L0 249 aa12.7□□□□□ -0.38
CPSF4-206ENST00000441580 SLAMF8Q9P0V8 285 aa12.7□□□□□ -0.38
CPSF4-206ENST00000441580 SLC23A2Q9UGH3 650 aa12.7□□□□□ -0.38
CPSF4-206ENST00000441580 RAB26Q9ULW5 256 aa12.7□□□□□ -0.38
CPSF4-206ENST00000441580 MMP17Q9ULZ9 603 aa12.7□□□□□ -0.38
CPSF4-206ENST00000441580 TDRKHQ9Y2W6 561 aaKnown RBP12.7□□□□□ -0.38
CPSF4-206ENST00000441580 TBC1D3DA0A087WVF3 549 aa12.69□□□□□ -0.38
CPSF4-206ENST00000441580 TBC1D3IA0A087WXS9 549 aa12.69□□□□□ -0.38
CPSF4-206ENST00000441580 TBC1D3EA0A087X179 549 aa12.69□□□□□ -0.38
CPSF4-206ENST00000441580 TBC1D3KA0A087X1G2 549 aa12.69□□□□□ -0.38
CPSF4-206ENST00000441580 TCRBV5S2A0A599 114 aa12.69□□□□□ -0.38
CPSF4-206ENST00000441580 TBC1D3FA6NER0 549 aaPredicted RBP12.69□□□□□ -0.38
CPSF4-206ENST00000441580 PRR19A6NJB7 356 aa12.69□□□□□ -0.38
CPSF4-206ENST00000441580 TBC1D3LB9A6J9 549 aa12.69□□□□□ -0.38
CPSF4-206ENST00000441580 RFXANKO14593 260 aa12.69□□□□□ -0.38
CPSF4-206ENST00000441580 TOR1BO14657 336 aa12.69□□□□□ -0.38
CPSF4-206ENST00000441580 AKAP10O43572 662 aa12.69□□□□□ -0.38
CPSF4-206ENST00000441580 SCELO95171 688 aa12.69□□□□□ -0.38
CPSF4-206ENST00000441580 CCNDBP1O95273 360 aa12.69□□□□□ -0.38
CPSF4-206ENST00000441580 PAK4O96013 591 aaPredicted RBP12.69□□□□□ -0.38
CPSF4-206ENST00000441580 TBC1D3HP0C7X1 549 aa12.69□□□□□ -0.38
CPSF4-206ENST00000441580 CDH1P12830 882 aa12.69□□□□□ -0.38
CPSF4-206ENST00000441580 HOXB9P17482 250 aaPredicted RBP12.69□□□□□ -0.38
CPSF4-206ENST00000441580 IDSP22304 550 aa12.69□□□□□ -0.38
CPSF4-206ENST00000441580 PPIBP23284 216 aaKnown RBP12.69□□□□□ -0.38
CPSF4-206ENST00000441580 FASP25445 335 aa12.69□□□□□ -0.38
CPSF4-206ENST00000441580 PKLRP30613 574 aa12.69□□□□□ -0.38
CPSF4-206ENST00000441580 RAB28P51157 221 aa12.69□□□□□ -0.38
CPSF4-206ENST00000441580 CLCN2P51788 898 aa12.69□□□□□ -0.38
CPSF4-206ENST00000441580 PPP2CBP62714 309 aa12.69□□□□□ -0.38
CPSF4-206ENST00000441580 PPP2CAP67775 309 aa12.69□□□□□ -0.38
CPSF4-206ENST00000441580 BLMHQ13867 455 aa12.69□□□□□ -0.38
CPSF4-206ENST00000441580 NFATC4Q14934 902 aa12.69□□□□□ -0.38
CPSF4-206ENST00000441580 DUOXA1Q1HG43 343 aa12.69□□□□□ -0.38
CPSF4-206ENST00000441580 LRRC36Q1X8D7 754 aa12.69□□□□□ -0.38
CPSF4-206ENST00000441580 PGS1Q32NB8 556 aa12.69□□□□□ -0.38
CPSF4-206ENST00000441580 PYCR3Q53H96 274 aa12.69□□□□□ -0.38
CPSF4-206ENST00000441580 CATSPEREQ5SY80 951 aa12.69□□□□□ -0.38
CPSF4-206ENST00000441580 ANXA8L1Q5VT79 327 aa12.69□□□□□ -0.38
CPSF4-206ENST00000441580 TBC1D3GQ6DHY5 549 aa12.69□□□□□ -0.38
CPSF4-206ENST00000441580 TBC1D3CQ6IPX1 549 aa12.69□□□□□ -0.38
CPSF4-206ENST00000441580 IKBIPQ70UQ0 350 aa12.69□□□□□ -0.38
CPSF4-206ENST00000441580 R3HCC1LQ7Z5L2 792 aaKnown RBP12.69□□□□□ -0.38
CPSF4-206ENST00000441580 SPPL2CQ8IUH8 684 aa12.69□□□□□ -0.38
CPSF4-206ENST00000441580 MSRB3Q8IXL7 192 aa12.69□□□□□ -0.38
CPSF4-206ENST00000441580 TBC1D3Q8IZP1 549 aaPredicted RBP12.69□□□□□ -0.38
CPSF4-206ENST00000441580 VPS37AQ8NEZ2 397 aa12.69□□□□□ -0.38
CPSF4-206ENST00000441580 OR52E4Q8NGH9 312 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms