RNA–Protein interactions for RNA: ENST00000441542.6

HDAC9-214, Transcript of histone deacetylase 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HDAC9, Length 3,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-214ENST00000441542 WSCD2Q2TBF2 565 aa7.31□□□□□ -1.24
HDAC9-214ENST00000441542 RFX4Q33E94 735 aa7.31□□□□□ -1.24
HDAC9-214ENST00000441542 TRIQKQ629K1 86 aa7.31□□□□□ -1.24
HDAC9-214ENST00000441542 MSANTD2Q6P1R3 559 aa7.31□□□□□ -1.24
HDAC9-214ENST00000441542 CATSPERGQ6ZRH7 1159 aa7.31□□□□□ -1.24
HDAC9-214ENST00000441542 ZNF621Q6ZSS3 439 aa7.31□□□□□ -1.24
HDAC9-214ENST00000441542 COMMD7Q86VX2 200 aa7.31□□□□□ -1.24
HDAC9-214ENST00000441542 LSRQ86X29 649 aaPredicted RBP7.31□□□□□ -1.24
HDAC9-214ENST00000441542 SLC37A3Q8NCC5 494 aa7.31□□□□□ -1.24
HDAC9-214ENST00000441542 B3GALNT2Q8NCR0 500 aa7.31□□□□□ -1.24
HDAC9-214ENST00000441542 C19orf18Q8NEA5 215 aa7.31□□□□□ -1.24
HDAC9-214ENST00000441542 ZFAND1Q8TCF1 268 aa7.31□□□□□ -1.24
HDAC9-214ENST00000441542 RBM18Q96H35 190 aaKnown RBP7.31□□□□□ -1.24
HDAC9-214ENST00000441542 TSGA13Q96PP4 275 aa7.31□□□□□ -1.24
HDAC9-214ENST00000441542 SGIP1Q9BQI5 828 aa7.31□□□□□ -1.24
HDAC9-214ENST00000441542 ACTL8Q9H568 366 aa7.31□□□□□ -1.24
HDAC9-214ENST00000441542 ASB7Q9H672 318 aa7.31□□□□□ -1.24
HDAC9-214ENST00000441542 C1orf109Q9NX04 203 aa7.31□□□□□ -1.24
HDAC9-214ENST00000441542 RCOR3Q9P2K3 495 aaPredicted RBP7.31□□□□□ -1.24
HDAC9-214ENST00000441542 TMEM88BA6NKF7 163 aa7.31□□□□□ -1.24
HDAC9-214ENST00000441542 PDPK1O15530 556 aa7.31□□□□□ -1.24
HDAC9-214ENST00000441542 NDUFS3O75489 264 aa7.31□□□□□ -1.24
HDAC9-214ENST00000441542 EGFRP00533 1210 aa7.31□□□□□ -1.24
HDAC9-214ENST00000441542 HMBSP08397 361 aa7.31□□□□□ -1.24
HDAC9-214ENST00000441542 UROSP10746 265 aa7.31□□□□□ -1.24
HDAC9-214ENST00000441542 APEX1P27695 318 aaKnown RBP7.31□□□□□ -1.24
HDAC9-214ENST00000441542 ERP29P30040 261 aaKnown RBP7.31□□□□□ -1.24
HDAC9-214ENST00000441542 HOXA9P31269 272 aa7.31□□□□□ -1.24
HDAC9-214ENST00000441542 GPC1P35052 558 aa7.31□□□□□ -1.24
HDAC9-214ENST00000441542 TIE1P35590 1138 aa7.31□□□□□ -1.24
HDAC9-214ENST00000441542 HSD17B2P37059 387 aa7.31□□□□□ -1.24
HDAC9-214ENST00000441542 FEN1P39748 380 aaKnown RBP7.31□□□□□ -1.24
HDAC9-214ENST00000441542 RAD51Q06609 339 aa7.31□□□□□ -1.24
HDAC9-214ENST00000441542 SLC10A7Q0GE19 358 aa7.31□□□□□ -1.24
HDAC9-214ENST00000441542 C19orf57Q0VDD7 668 aa7.31□□□□□ -1.24
HDAC9-214ENST00000441542 HNRNPA0Q13151 305 aaKnown RBP7.31□□□□□ -1.24
HDAC9-214ENST00000441542 RPA4Q13156 261 aa7.31□□□□□ -1.24
HDAC9-214ENST00000441542 SLC14A1Q13336 389 aa7.31□□□□□ -1.24
HDAC9-214ENST00000441542 LRRC32Q14392 662 aa7.31□□□□□ -1.24
HDAC9-214ENST00000441542 FBXO47Q5MNV8 452 aa7.31□□□□□ -1.24
HDAC9-214ENST00000441542 OVOS1Q6IE37 1185 aa7.31□□□□□ -1.24
HDAC9-214ENST00000441542 ASB18Q6ZVZ8 466 aa7.31□□□□□ -1.24
HDAC9-214ENST00000441542 BCDIN3DQ7Z5W3 292 aaKnown RBP7.31□□□□□ -1.24
HDAC9-214ENST00000441542 CCDC190Q86UF4 302 aa7.31□□□□□ -1.24
HDAC9-214ENST00000441542 TAC4Q86UU9 113 aa7.31□□□□□ -1.24
HDAC9-214ENST00000441542 CIR1Q86X95 450 aaPredicted RBP7.31□□□□□ -1.24
HDAC9-214ENST00000441542 GPSM1Q86YR5 675 aa7.31□□□□□ -1.24
HDAC9-214ENST00000441542 CNTN4Q8IWV2 1026 aa7.31□□□□□ -1.24
HDAC9-214ENST00000441542 NIM1KQ8IY84 436 aa7.31□□□□□ -1.24
HDAC9-214ENST00000441542 CPA6Q8N4T0 437 aa7.31□□□□□ -1.24
HDAC9-214ENST00000441542 OR4M2Q8NGB6 313 aa7.31□□□□□ -1.24
HDAC9-214ENST00000441542 APH1BQ8WW43 257 aa7.31□□□□□ -1.24
HDAC9-214ENST00000441542 MYDGFQ969H8 173 aa7.31□□□□□ -1.24
HDAC9-214ENST00000441542 LINGO1Q96FE5 620 aa7.31□□□□□ -1.24
HDAC9-214ENST00000441542 ZNF599Q96NL3 588 aa7.31□□□□□ -1.24
HDAC9-214ENST00000441542 MCCC1Q96RQ3 725 aaPredicted RBP7.31□□□□□ -1.24
HDAC9-214ENST00000441542 ATOH8Q96SQ7 321 aa7.31□□□□□ -1.24
HDAC9-214ENST00000441542 WACQ9BTA9 647 aa7.31□□□□□ -1.24
HDAC9-214ENST00000441542 GON7Q9BXV9 100 aa7.31□□□□□ -1.24
HDAC9-214ENST00000441542 TM9SF3Q9HD45 589 aa7.31□□□□□ -1.24
HDAC9-214ENST00000441542 REV1Q9UBZ9 1251 aa7.31□□□□□ -1.24
HDAC9-214ENST00000441542 GJD2Q9UKL4 321 aa7.31□□□□□ -1.24
HDAC9-214ENST00000441542 ZNF214Q9UL59 606 aaPredicted RBP7.31□□□□□ -1.24
HDAC9-214ENST00000441542 GRIP1Q9Y3R0 1128 aa7.31□□□□□ -1.24
HDAC9-214ENST00000441542 FER1L6Q2WGJ9 1857 aa7.31□□□□□ -1.24
HDAC9-214ENST00000441542 SLC35F4A4IF30 521 aa7.31□□□□□ -1.24
HDAC9-214ENST00000441542 NCAM2O15394 837 aa7.31□□□□□ -1.24
HDAC9-214ENST00000441542 GLUD1P00367 558 aa7.31□□□□□ -1.24
HDAC9-214ENST00000441542 C9P02748 559 aa7.31□□□□□ -1.24
HDAC9-214ENST00000441542 FGF4P08620 206 aa7.31□□□□□ -1.24
HDAC9-214ENST00000441542 NPR3P17342 541 aa7.31□□□□□ -1.24
HDAC9-214ENST00000441542 CDKN2CP42773 168 aa7.31□□□□□ -1.24
HDAC9-214ENST00000441542 GZMKP49863 264 aa7.31□□□□□ -1.24
HDAC9-214ENST00000441542 FADDQ13158 208 aa7.31□□□□□ -1.24
HDAC9-214ENST00000441542 GRIK4Q16099 956 aa7.31□□□□□ -1.24
HDAC9-214ENST00000441542 CPSF6Q16630 551 aaKnown RBP eCLIP7.31□□□□□ -1.24
HDAC9-214ENST00000441542 MFSD14CQ5VZR4 134 aa7.31□□□□□ -1.24
HDAC9-214ENST00000441542 LRRC66Q68CR7 880 aa7.31□□□□□ -1.24
HDAC9-214ENST00000441542 EIF3MQ7L2H7 374 aaKnown RBP7.31□□□□□ -1.24
HDAC9-214ENST00000441542 MSRB3Q8IXL7 192 aa7.31□□□□□ -1.24
HDAC9-214ENST00000441542 VWA5B2Q8N398 1253 aa7.31□□□□□ -1.24
HDAC9-214ENST00000441542 ATP6V1C2Q8NEY4 427 aa7.31□□□□□ -1.24
HDAC9-214ENST00000441542 OR4F6Q8NGB9 312 aa7.31□□□□□ -1.24
HDAC9-214ENST00000441542 FBXW5Q969U6 566 aa7.31□□□□□ -1.24
HDAC9-214ENST00000441542 HSH2DQ96JZ2 352 aa7.31□□□□□ -1.24
HDAC9-214ENST00000441542 TTLL2Q9BWV7 592 aa7.31□□□□□ -1.24
HDAC9-214ENST00000441542 DEFB129Q9H1M3 183 aa7.31□□□□□ -1.24
HDAC9-214ENST00000441542 SAV1Q9H4B6 383 aaPredicted RBP7.31□□□□□ -1.24
HDAC9-214ENST00000441542 DCAF13Q9NV06 445 aaKnown RBP7.31□□□□□ -1.24
HDAC9-214ENST00000441542 RLIMQ9NVW2 624 aa7.31□□□□□ -1.24
HDAC9-214ENST00000441542 ING3Q9NXR8 418 aa7.31□□□□□ -1.24
HDAC9-214ENST00000441542 RHCGQ9UBD6 479 aa7.31□□□□□ -1.24
HDAC9-214ENST00000441542 PFDN2Q9UHV9 154 aa7.31□□□□□ -1.24
HDAC9-214ENST00000441542 FBXW11Q9UKB1 542 aa7.31□□□□□ -1.24
HDAC9-214ENST00000441542 ACTL7AQ9Y615 435 aa7.31□□□□□ -1.24
HDAC9-214ENST00000441542 TRAV6A0A075B6T7 132 aa7.3□□□□□ -1.24
HDAC9-214ENST00000441542 A0A1W2PQL4 384 aaPredicted RBP7.3□□□□□ -1.24
HDAC9-214ENST00000441542 WASHC1A8K0Z3 465 aa7.3□□□□□ -1.24
HDAC9-214ENST00000441542 ZNF487B1APH4 448 aa7.3□□□□□ -1.24
HDAC9-214ENST00000441542 ACSL4O60488 711 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms