RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 PTPN13Q12923 2485 aa18.94■□□□□ 0.62
SHROOM1-204ENST00000440118 PRRC2CQ9Y520 2896 aaKnown RBP18.94■□□□□ 0.62
SHROOM1-204ENST00000440118 DOPEY2Q9Y3R5 2298 aa18.93■□□□□ 0.62
SHROOM1-204ENST00000440118 IGKV1-8A0A0C4DH67 115 aa18.93■□□□□ 0.62
SHROOM1-204ENST00000440118 EFCAB8A8MWE9 144 aa18.93■□□□□ 0.62
SHROOM1-204ENST00000440118 CDKN2DP55273 166 aa18.93■□□□□ 0.62
SHROOM1-204ENST00000440118 AIMP2Q13155 320 aaKnown RBP18.93■□□□□ 0.62
SHROOM1-204ENST00000440118 HKDC1Q2TB90 917 aa18.93■□□□□ 0.62
SHROOM1-204ENST00000440118 TUBB8Q3ZCM7 444 aa18.93■□□□□ 0.62
SHROOM1-204ENST00000440118 ZNF425Q6IV72 752 aa18.93■□□□□ 0.62
SHROOM1-204ENST00000440118 HIBCHQ6NVY1 386 aaPredicted RBP18.93■□□□□ 0.62
SHROOM1-204ENST00000440118 JMJD6Q6NYC1 403 aaPredicted RBP18.93■□□□□ 0.62
SHROOM1-204ENST00000440118 FBXO42Q6P3S6 717 aa18.93■□□□□ 0.62
SHROOM1-204ENST00000440118 PAQR3Q6TCH7 311 aa18.93■□□□□ 0.62
SHROOM1-204ENST00000440118 CYHR1Q6ZMK1 362 aa18.93■□□□□ 0.62
SHROOM1-204ENST00000440118 ANKMY2Q8IV38 441 aa18.93■□□□□ 0.62
SHROOM1-204ENST00000440118 IGDCC3Q8IVU1 814 aa18.93■□□□□ 0.62
SHROOM1-204ENST00000440118 NACC2Q96BF6 587 aa18.93■□□□□ 0.62
SHROOM1-204ENST00000440118 C10orf90Q96M02 699 aa18.93■□□□□ 0.62
SHROOM1-204ENST00000440118 CCDC138Q96M89 665 aa18.93■□□□□ 0.62
SHROOM1-204ENST00000440118 PWWP2AQ96N64 755 aa18.93■□□□□ 0.62
SHROOM1-204ENST00000440118 KRT12Q99456 494 aa18.93■□□□□ 0.62
SHROOM1-204ENST00000440118 PCBD2Q9H0N5 130 aa18.93■□□□□ 0.62
SHROOM1-204ENST00000440118 PARVBQ9HBI1 364 aa18.93■□□□□ 0.62
SHROOM1-204ENST00000440118 CUEDC1Q9NWM3 386 aaPredicted RBP18.93■□□□□ 0.62
SHROOM1-204ENST00000440118 ZFATQ9P243 1243 aa18.93■□□□□ 0.62
SHROOM1-204ENST00000440118 C5AR2Q9P296 337 aa18.93■□□□□ 0.62
SHROOM1-204ENST00000440118 TRPC4Q9UBN4 977 aa18.93■□□□□ 0.62
SHROOM1-204ENST00000440118 RNF14Q9UBS8 474 aa18.93■□□□□ 0.62
SHROOM1-204ENST00000440118 DOCK10Q96BY6 2186 aa18.93■□□□□ 0.62
SHROOM1-204ENST00000440118 LRRK2Q5S007 2527 aa18.92■□□□□ 0.62
SHROOM1-204ENST00000440118 H7BY64 318 aa18.92■□□□□ 0.62
SHROOM1-204ENST00000440118 MAP2K7O14733 419 aa18.92■□□□□ 0.62
SHROOM1-204ENST00000440118 HAT1O14929 419 aa18.92■□□□□ 0.62
SHROOM1-204ENST00000440118 ALOX12BO75342 701 aa18.92■□□□□ 0.62
SHROOM1-204ENST00000440118 SEC31AO94979 1220 aaKnown RBP18.92■□□□□ 0.62
SHROOM1-204ENST00000440118 ONECUT2O95948 504 aa18.92■□□□□ 0.62
SHROOM1-204ENST00000440118 AHSGP02765 367 aa18.92■□□□□ 0.62
SHROOM1-204ENST00000440118 IVDP26440 423 aa18.92■□□□□ 0.62
SHROOM1-204ENST00000440118 IL2P60568 153 aa18.92■□□□□ 0.62
SHROOM1-204ENST00000440118 PDIA2Q13087 525 aaKnown RBP18.92■□□□□ 0.62
SHROOM1-204ENST00000440118 NDUFA9Q16795 377 aa18.92■□□□□ 0.62
SHROOM1-204ENST00000440118 PRTGQ2VWP7 1150 aa18.92■□□□□ 0.62
SHROOM1-204ENST00000440118 FAM45BPQ6NSW5 357 aa18.92■□□□□ 0.62
SHROOM1-204ENST00000440118 MBOAT1Q6ZNC8 495 aa18.92■□□□□ 0.62
SHROOM1-204ENST00000440118 PLD3Q8IV08 490 aa18.92■□□□□ 0.62
SHROOM1-204ENST00000440118 FAM45AQ8TCE6 357 aa18.92■□□□□ 0.62
SHROOM1-204ENST00000440118 STT3BQ8TCJ2 826 aa18.92■□□□□ 0.62
SHROOM1-204ENST00000440118 PNPLA2Q96AD5 504 aa18.92■□□□□ 0.62
SHROOM1-204ENST00000440118 MVB12AQ96EY5 273 aa18.92■□□□□ 0.62
SHROOM1-204ENST00000440118 MMABQ96EY8 250 aaPredicted RBP18.92■□□□□ 0.62
SHROOM1-204ENST00000440118 PRAP1Q96NZ9 151 aa18.92■□□□□ 0.62
SHROOM1-204ENST00000440118 TRIM54Q9BYV2 358 aa18.92■□□□□ 0.62
SHROOM1-204ENST00000440118 DRC3Q9H069 523 aa18.92■□□□□ 0.62
SHROOM1-204ENST00000440118 ILKAPQ9H0C8 392 aaPredicted RBP18.92■□□□□ 0.62
SHROOM1-204ENST00000440118 ENAMQ9NRM1 1142 aa18.92■□□□□ 0.62
SHROOM1-204ENST00000440118 ADAMTS6Q9UKP5 1117 aa18.92■□□□□ 0.62
SHROOM1-204ENST00000440118 CORO1CQ9ULV4 474 aaPredicted RBP18.92■□□□□ 0.62
SHROOM1-204ENST00000440118 PDE10AQ9Y233 779 aa18.92■□□□□ 0.62
SHROOM1-204ENST00000440118 HS3ST3B1Q9Y662 390 aa18.92■□□□□ 0.62
SHROOM1-204ENST00000440118 MASP2O00187 686 aa18.91■□□□□ 0.62
SHROOM1-204ENST00000440118 SLC16A5O15375 505 aa18.91■□□□□ 0.62
SHROOM1-204ENST00000440118 MED26O95402 600 aa18.91■□□□□ 0.62
SHROOM1-204ENST00000440118 UQCRHP07919 91 aa18.91■□□□□ 0.62
SHROOM1-204ENST00000440118 ZGLP1P0C6A0 271 aa18.91■□□□□ 0.62
SHROOM1-204ENST00000440118 ACPPP15309 386 aa18.91■□□□□ 0.62
SHROOM1-204ENST00000440118 SAT1P21673 171 aa18.91■□□□□ 0.62
SHROOM1-204ENST00000440118 CCND1P24385 295 aa18.91■□□□□ 0.62
SHROOM1-204ENST00000440118 HRH2P25021 359 aa18.91■□□□□ 0.62
SHROOM1-204ENST00000440118 GABRB3P28472 473 aa18.91■□□□□ 0.62
SHROOM1-204ENST00000440118 GRK3P35626 688 aa18.91■□□□□ 0.62
SHROOM1-204ENST00000440118 EMP3P54852 163 aa18.91■□□□□ 0.62
SHROOM1-204ENST00000440118 KLC1Q07866 573 aa18.91■□□□□ 0.62
SHROOM1-204ENST00000440118 DSG2Q14126 1118 aa18.91■□□□□ 0.62
SHROOM1-204ENST00000440118 TEDDM1Q5T9Z0 273 aa18.91■□□□□ 0.62
SHROOM1-204ENST00000440118 HECTD2Q5U5R9 776 aa18.91■□□□□ 0.62
SHROOM1-204ENST00000440118 GARNL3Q5VVW2 1013 aa18.91■□□□□ 0.62
SHROOM1-204ENST00000440118 SLC6A19Q695T7 634 aa18.91■□□□□ 0.62
SHROOM1-204ENST00000440118 TRMT10BQ6PF06 316 aaKnown RBP18.91■□□□□ 0.62
SHROOM1-204ENST00000440118 AGTRAPQ6RW13 159 aa18.91■□□□□ 0.62
SHROOM1-204ENST00000440118 GALNT7Q86SF2 657 aa18.91■□□□□ 0.62
SHROOM1-204ENST00000440118 C17orf64Q86WR6 236 aa18.91■□□□□ 0.62
SHROOM1-204ENST00000440118 TMEM151BQ8IW70 566 aa18.91■□□□□ 0.62
SHROOM1-204ENST00000440118 BBOF1Q8ND07 529 aa18.91■□□□□ 0.62
SHROOM1-204ENST00000440118 ATG10Q9H0Y0 220 aa18.91■□□□□ 0.62
SHROOM1-204ENST00000440118 ARL15Q9NXU5 204 aa18.91■□□□□ 0.62
SHROOM1-204ENST00000440118 C3orf18Q9UK00 162 aa18.91■□□□□ 0.62
SHROOM1-204ENST00000440118 TEX264Q9Y6I9 313 aa18.91■□□□□ 0.62
SHROOM1-204ENST00000440118 SOCS6O14544 535 aa18.9■□□□□ 0.62
SHROOM1-204ENST00000440118 FFAR3O14843 346 aa18.9■□□□□ 0.62
SHROOM1-204ENST00000440118 GPR42O15529 346 aa18.9■□□□□ 0.62
SHROOM1-204ENST00000440118 SORBS2O94875 1100 aaKnown RBP18.9■□□□□ 0.62
SHROOM1-204ENST00000440118 STATHP02808 62 aa18.9■□□□□ 0.62
SHROOM1-204ENST00000440118 AVPR1BP47901 424 aa18.9■□□□□ 0.62
SHROOM1-204ENST00000440118 RPS15AP62244 130 aaKnown RBP18.9■□□□□ 0.62
SHROOM1-204ENST00000440118 CALCOCO2Q13137 446 aa18.9■□□□□ 0.62
SHROOM1-204ENST00000440118 NAE1Q13564 534 aa18.9■□□□□ 0.62
SHROOM1-204ENST00000440118 LRRC56Q8IYG6 542 aaPredicted RBP18.9■□□□□ 0.62
SHROOM1-204ENST00000440118 ZADH2Q8N4Q0 377 aa18.9■□□□□ 0.62
SHROOM1-204ENST00000440118 RBMXL3Q8N7X1 1067 aaKnown RBP18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms