RNA–Protein interactions for RNA: ENST00000439724.7

SMAD3-202, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-202ENST00000439724 ADNP2Q6IQ32 1131 aa11.36□□□□□ -0.59
SMAD3-202ENST00000439724 GALNT18Q6P9A2 607 aa11.36□□□□□ -0.59
SMAD3-202ENST00000439724 DNAJC14Q6Y2X3 702 aaPredicted RBP11.36□□□□□ -0.59
SMAD3-202ENST00000439724 HORMAD1Q86X24 394 aa11.36□□□□□ -0.59
SMAD3-202ENST00000439724 TMEM132CQ8N3T6 1108 aa11.36□□□□□ -0.59
SMAD3-202ENST00000439724 DTWD1Q8N5C7 304 aa11.36□□□□□ -0.59
SMAD3-202ENST00000439724 C1orf52Q8N6N3 182 aaKnown RBP11.36□□□□□ -0.59
SMAD3-202ENST00000439724 ZNF548Q8NEK5 533 aaPredicted RBP11.36□□□□□ -0.59
SMAD3-202ENST00000439724 OR2T12Q8NG77 320 aa11.36□□□□□ -0.59
SMAD3-202ENST00000439724 OR8J2Q8NGG1 315 aa11.36□□□□□ -0.59
SMAD3-202ENST00000439724 OR14C36Q8NHC7 312 aa11.36□□□□□ -0.59
SMAD3-202ENST00000439724 GANCQ8TET4 914 aa11.36□□□□□ -0.59
SMAD3-202ENST00000439724 ASB12Q8WXK4 309 aa11.36□□□□□ -0.59
SMAD3-202ENST00000439724 NELL1Q92832 810 aa11.36□□□□□ -0.59
SMAD3-202ENST00000439724 UBE2E3Q969T4 207 aa11.36□□□□□ -0.59
SMAD3-202ENST00000439724 EGLN2Q96KS0 407 aa11.36□□□□□ -0.59
SMAD3-202ENST00000439724 EBPLQ9BY08 206 aa11.36□□□□□ -0.59
SMAD3-202ENST00000439724 SLC17A9Q9BYT1 436 aa11.36□□□□□ -0.59
SMAD3-202ENST00000439724 SEMA6AQ9H2E6 1030 aa11.36□□□□□ -0.59
SMAD3-202ENST00000439724 IKZF5Q9H5V7 419 aa11.36□□□□□ -0.59
SMAD3-202ENST00000439724 ZNF576Q9H609 170 aa11.36□□□□□ -0.59
SMAD3-202ENST00000439724 DMRT3Q9NQL9 472 aa11.36□□□□□ -0.59
SMAD3-202ENST00000439724 FAM120CQ9NX05 1096 aaKnown RBP11.36□□□□□ -0.59
SMAD3-202ENST00000439724 ACSL5Q9ULC5 683 aa11.36□□□□□ -0.59
SMAD3-202ENST00000439724 FZD4Q9ULV1 537 aa11.36□□□□□ -0.59
SMAD3-202ENST00000439724 SLC17A4Q9Y2C5 497 aa11.36□□□□□ -0.59
SMAD3-202ENST00000439724 OR1A2Q9Y585 309 aa11.36□□□□□ -0.59
SMAD3-202ENST00000439724 PRR19A6NJB7 356 aa11.35□□□□□ -0.59
SMAD3-202ENST00000439724 KCNJ13O60928 360 aa11.35□□□□□ -0.59
SMAD3-202ENST00000439724 LRATO95237 230 aa11.35□□□□□ -0.59
SMAD3-202ENST00000439724 KLF8O95600 359 aaPredicted RBP11.35□□□□□ -0.59
SMAD3-202ENST00000439724 ANXA6P08133 673 aa11.35□□□□□ -0.59
SMAD3-202ENST00000439724 SLC35G4P0C7Q5 338 aa11.35□□□□□ -0.59
SMAD3-202ENST00000439724 CDH1P12830 882 aa11.35□□□□□ -0.59
SMAD3-202ENST00000439724 COL9A1P20849 921 aa11.35□□□□□ -0.59
SMAD3-202ENST00000439724 FASP25445 335 aa11.35□□□□□ -0.59
SMAD3-202ENST00000439724 TIA1P31483 386 aaKnown RBP eCLIP11.35□□□□□ -0.59
SMAD3-202ENST00000439724 IGFALSP35858 605 aa11.35□□□□□ -0.59
SMAD3-202ENST00000439724 PIK3CBP42338 1070 aa11.35□□□□□ -0.59
SMAD3-202ENST00000439724 MRPS21P82921 87 aaKnown RBP11.35□□□□□ -0.59
SMAD3-202ENST00000439724 TSTA3Q13630 321 aaPredicted RBP11.35□□□□□ -0.59
SMAD3-202ENST00000439724 CYP2A13Q16696 494 aa11.35□□□□□ -0.59
SMAD3-202ENST00000439724 PGS1Q32NB8 556 aa11.35□□□□□ -0.59
SMAD3-202ENST00000439724 GTDC1Q4AE62 458 aa11.35□□□□□ -0.59
SMAD3-202ENST00000439724 USP30Q70CQ3 517 aa11.35□□□□□ -0.59
SMAD3-202ENST00000439724 CAMKMTQ7Z624 323 aa11.35□□□□□ -0.59
SMAD3-202ENST00000439724 AMIGO2Q86SJ2 522 aa11.35□□□□□ -0.59
SMAD3-202ENST00000439724 CALHM3Q86XJ0 350 aa11.35□□□□□ -0.59
SMAD3-202ENST00000439724 TBC1D21Q8IYX1 336 aa11.35□□□□□ -0.59
SMAD3-202ENST00000439724 MARVELD2Q8N4S9 558 aa11.35□□□□□ -0.59
SMAD3-202ENST00000439724 PHC3Q8NDX5 983 aa11.35□□□□□ -0.59
SMAD3-202ENST00000439724 OR52E4Q8NGH9 312 aa11.35□□□□□ -0.59
SMAD3-202ENST00000439724 FAM110BQ8TC76 370 aa11.35□□□□□ -0.59
SMAD3-202ENST00000439724 PPWD1Q96BP3 646 aaKnown RBP11.35□□□□□ -0.59
SMAD3-202ENST00000439724 BIRC7Q96CA5 298 aa11.35□□□□□ -0.59
SMAD3-202ENST00000439724 ZNF597Q96LX8 424 aa11.35□□□□□ -0.59
SMAD3-202ENST00000439724 IL17FQ96PD4 163 aa11.35□□□□□ -0.59
SMAD3-202ENST00000439724 GBP5Q96PP8 586 aa11.35□□□□□ -0.59
SMAD3-202ENST00000439724 INPP5KQ9BT40 448 aa11.35□□□□□ -0.59
SMAD3-202ENST00000439724 THUMPD3Q9BV44 507 aaKnown RBP11.35□□□□□ -0.59
SMAD3-202ENST00000439724 REXO4Q9GZR2 422 aaKnown RBP11.35□□□□□ -0.59
SMAD3-202ENST00000439724 TRIT1Q9H3H1 467 aaKnown RBP11.35□□□□□ -0.59
SMAD3-202ENST00000439724 C8orf33Q9H7E9 229 aaPredicted RBP11.35□□□□□ -0.59
SMAD3-202ENST00000439724 COQ10BQ9H8M1 238 aa11.35□□□□□ -0.59
SMAD3-202ENST00000439724 GORASP2Q9H8Y8 452 aa11.35□□□□□ -0.59
SMAD3-202ENST00000439724 TM7SF3Q9NS93 570 aa11.35□□□□□ -0.59
SMAD3-202ENST00000439724 SLC6A13Q9NSD5 602 aa11.35□□□□□ -0.59
SMAD3-202ENST00000439724 SCOCQ9UIL1 159 aa11.35□□□□□ -0.59
SMAD3-202ENST00000439724 PCDHB14Q9Y5E9 798 aa11.35□□□□□ -0.59
SMAD3-202ENST00000439724 AP4B1Q9Y6B7 739 aa11.35□□□□□ -0.59
SMAD3-202ENST00000439724 ATG2BQ96BY7 2078 aa11.35□□□□□ -0.59
SMAD3-202ENST00000439724 ELOVL7A1L3X0 281 aa11.35□□□□□ -0.59
SMAD3-202ENST00000439724 SCAMP2O15127 329 aaKnown RBP11.35□□□□□ -0.59
SMAD3-202ENST00000439724 SCN2BO60939 215 aa11.35□□□□□ -0.59
SMAD3-202ENST00000439724 GMNNO75496 209 aa11.35□□□□□ -0.59
SMAD3-202ENST00000439724 SMNDC1O75940 238 aaKnown RBP eCLIP11.35□□□□□ -0.59
SMAD3-202ENST00000439724 SCELO95171 688 aa11.35□□□□□ -0.59
SMAD3-202ENST00000439724 LYNP07948 512 aa11.35□□□□□ -0.59
SMAD3-202ENST00000439724 COX7A2P14406 83 aa11.35□□□□□ -0.59
SMAD3-202ENST00000439724 DRD1P21728 446 aa11.35□□□□□ -0.59
SMAD3-202ENST00000439724 GZMMP51124 257 aa11.35□□□□□ -0.59
SMAD3-202ENST00000439724 WNT3P56703 355 aa11.35□□□□□ -0.59
SMAD3-202ENST00000439724 PHEXP78562 749 aa11.35□□□□□ -0.59
SMAD3-202ENST00000439724 PON2Q15165 354 aa11.35□□□□□ -0.59
SMAD3-202ENST00000439724 DUOXA1Q1HG43 343 aa11.35□□□□□ -0.59
SMAD3-202ENST00000439724 INTS11Q5TA45 600 aaKnown RBP11.35□□□□□ -0.59
SMAD3-202ENST00000439724 THEMIS2Q5TEJ8 643 aa11.35□□□□□ -0.59
SMAD3-202ENST00000439724 OR4F3Q6IEY1 312 aa11.35□□□□□ -0.59
SMAD3-202ENST00000439724 PPP4R4Q6NUP7 873 aa11.35□□□□□ -0.59
SMAD3-202ENST00000439724 TMEM154Q6P9G4 183 aa11.35□□□□□ -0.59
SMAD3-202ENST00000439724 LPCAT2Q7L5N7 544 aa11.35□□□□□ -0.59
SMAD3-202ENST00000439724 FAM129CQ86XR2 697 aa11.35□□□□□ -0.59
SMAD3-202ENST00000439724 MICU2Q8IYU8 434 aa11.35□□□□□ -0.59
SMAD3-202ENST00000439724 PACRGLQ8N7B6 248 aa11.35□□□□□ -0.59
SMAD3-202ENST00000439724 OR10A6Q8NH74 314 aa11.35□□□□□ -0.59
SMAD3-202ENST00000439724 DNASE1L2Q92874 299 aa11.35□□□□□ -0.59
SMAD3-202ENST00000439724 KLK6Q92876 244 aa11.35□□□□□ -0.59
SMAD3-202ENST00000439724 CXorf40BQ96DE9 158 aa11.35□□□□□ -0.59
SMAD3-202ENST00000439724 CENPNQ96H22 339 aaPredicted RBP11.35□□□□□ -0.59
SMAD3-202ENST00000439724 ABHD8Q96I13 439 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms