RNA–Protein interactions for RNA: ENST00000438395.5

VPS50-204, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 3

Gene VPS50, Length 538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-204ENST00000438395 DCTP40126 519 aa7.41□□□□□ -1.22
VPS50-204ENST00000438395 GRIA1P42261 906 aa7.41□□□□□ -1.22
VPS50-204ENST00000438395 CRADDP78560 199 aa7.41□□□□□ -1.22
VPS50-204ENST00000438395 SARNPP82979 210 aaKnown RBP7.41□□□□□ -1.22
VPS50-204ENST00000438395 OASLQ15646 514 aaKnown RBP7.41□□□□□ -1.22
VPS50-204ENST00000438395 TTLL9Q3SXZ7 439 aa7.41□□□□□ -1.22
VPS50-204ENST00000438395 MEI1Q5TIA1 1274 aa7.41□□□□□ -1.22
VPS50-204ENST00000438395 CASC4Q6P4E1 433 aa7.41□□□□□ -1.22
VPS50-204ENST00000438395 KIRREL2Q6UWL6 708 aa7.41□□□□□ -1.22
VPS50-204ENST00000438395 LINC00696Q6ZRV3 163 aa7.41□□□□□ -1.22
VPS50-204ENST00000438395 ADCK2Q7Z695 626 aa7.41□□□□□ -1.22
VPS50-204ENST00000438395 ANKMY2Q8IV38 441 aa7.41□□□□□ -1.22
VPS50-204ENST00000438395 KBTBD2Q8IY47 623 aa7.41□□□□□ -1.22
VPS50-204ENST00000438395 BCORP1Q8N888 145 aa7.41□□□□□ -1.22
VPS50-204ENST00000438395 SPC24Q8NBT2 197 aa7.41□□□□□ -1.22
VPS50-204ENST00000438395 ST6GALNAC3Q8NDV1 305 aa7.41□□□□□ -1.22
VPS50-204ENST00000438395 OR2L3Q8NG85 312 aa7.41□□□□□ -1.22
VPS50-204ENST00000438395 OR11G2Q8NGC1 345 aa7.41□□□□□ -1.22
VPS50-204ENST00000438395 SUN3Q8TAQ9 357 aa7.41□□□□□ -1.22
VPS50-204ENST00000438395 STT3BQ8TCJ2 826 aa7.41□□□□□ -1.22
VPS50-204ENST00000438395 GRHL3Q8TE85 626 aa7.41□□□□□ -1.22
VPS50-204ENST00000438395 MAIP1Q8WWC4 291 aa7.41□□□□□ -1.22
VPS50-204ENST00000438395 SMPDL3AQ92484 453 aa7.41□□□□□ -1.22
VPS50-204ENST00000438395 ZFYVE21Q9BQ24 234 aa7.41□□□□□ -1.22
VPS50-204ENST00000438395 DPH7Q9BTV6 452 aa7.41□□□□□ -1.22
VPS50-204ENST00000438395 ACAT2Q9BWD1 397 aa7.41□□□□□ -1.22
VPS50-204ENST00000438395 CCDC68Q9H2F9 335 aa7.41□□□□□ -1.22
VPS50-204ENST00000438395 ZNF160Q9HCG1 818 aa7.41□□□□□ -1.22
VPS50-204ENST00000438395 CHRAC1Q9NRG0 131 aa7.41□□□□□ -1.22
VPS50-204ENST00000438395 SLC22A11Q9NSA0 550 aa7.41□□□□□ -1.22
VPS50-204ENST00000438395 OLAHQ9NV23 265 aa7.41□□□□□ -1.22
VPS50-204ENST00000438395 C14orf105Q9NVL8 296 aa7.41□□□□□ -1.22
VPS50-204ENST00000438395 SAMD15Q9P1V8 674 aa7.41□□□□□ -1.22
VPS50-204ENST00000438395 TRPC4Q9UBN4 977 aa7.41□□□□□ -1.22
VPS50-204ENST00000438395 ZC3H7BQ9UGR2 993 aaKnown RBP7.41□□□□□ -1.22
VPS50-204ENST00000438395 GUCA1BQ9UMX6 200 aa7.41□□□□□ -1.22
VPS50-204ENST00000438395 RUVBL2Q9Y230 463 aaKnown RBP7.41□□□□□ -1.22
VPS50-204ENST00000438395 OSGIN2Q9Y236 505 aa7.41□□□□□ -1.22
VPS50-204ENST00000438395 DRG1Q9Y295 367 aaKnown RBP7.41□□□□□ -1.22
VPS50-204ENST00000438395 GPC6Q9Y625 555 aaPredicted RBP7.41□□□□□ -1.22
VPS50-204ENST00000438395 SHANK1Q9Y566 2161 aa7.4□□□□□ -1.22
VPS50-204ENST00000438395 FITM1A5D6W6 292 aa7.4□□□□□ -1.22
VPS50-204ENST00000438395 TXNDC9O14530 226 aa7.4□□□□□ -1.22
VPS50-204ENST00000438395 SOCS6O14544 535 aa7.4□□□□□ -1.22
VPS50-204ENST00000438395 PCDH17O14917 1159 aa7.4□□□□□ -1.22
VPS50-204ENST00000438395 LRRTM2O43300 516 aa7.4□□□□□ -1.22
VPS50-204ENST00000438395 CTSVO60911 334 aa7.4□□□□□ -1.22
VPS50-204ENST00000438395 VAPBO95292 243 aa7.4□□□□□ -1.22
VPS50-204ENST00000438395 ONECUT2O95948 504 aa7.4□□□□□ -1.22
VPS50-204ENST00000438395 ESR1P03372 595 aa7.4□□□□□ -1.22
VPS50-204ENST00000438395 HEXBP07686 556 aa7.4□□□□□ -1.22
VPS50-204ENST00000438395 ZGLP1P0C6A0 271 aa7.4□□□□□ -1.22
VPS50-204ENST00000438395 EDN3P14138 238 aa7.4□□□□□ -1.22
VPS50-204ENST00000438395 PKMP14618 531 aaKnown RBP7.4□□□□□ -1.22
VPS50-204ENST00000438395 RPS3P23396 243 aaKnown RBP eCLIP7.4□□□□□ -1.22
VPS50-204ENST00000438395 ATP5DP30049 168 aa7.4□□□□□ -1.22
VPS50-204ENST00000438395 FMO4P31512 558 aa7.4□□□□□ -1.22
VPS50-204ENST00000438395 HSD17B2P37059 387 aa7.4□□□□□ -1.22
VPS50-204ENST00000438395 NPY2RP49146 381 aa7.4□□□□□ -1.22
VPS50-204ENST00000438395 EMP2P54851 167 aa7.4□□□□□ -1.22
VPS50-204ENST00000438395 CDK16Q00536 496 aa7.4□□□□□ -1.22
VPS50-204ENST00000438395 KLC1Q07866 573 aa7.4□□□□□ -1.22
VPS50-204ENST00000438395 MFAP5Q13361 173 aa7.4□□□□□ -1.22
VPS50-204ENST00000438395 SEMA3AQ14563 771 aa7.4□□□□□ -1.22
VPS50-204ENST00000438395 ANKRD20A4Q4UJ75 823 aa7.4□□□□□ -1.22
VPS50-204ENST00000438395 CRB2Q5IJ48 1285 aa7.4□□□□□ -1.22
VPS50-204ENST00000438395 THEMIS2Q5TEJ8 643 aa7.4□□□□□ -1.22
VPS50-204ENST00000438395 COX15Q7KZN9 410 aa7.4□□□□□ -1.22
VPS50-204ENST00000438395 RNF44Q7L0R7 432 aa7.4□□□□□ -1.22
VPS50-204ENST00000438395 BTLAQ7Z6A9 289 aa7.4□□□□□ -1.22
VPS50-204ENST00000438395 CD163Q86VB7 1156 aa7.4□□□□□ -1.22
VPS50-204ENST00000438395 CSNK1A1LQ8N752 337 aa7.4□□□□□ -1.22
VPS50-204ENST00000438395 OR1N1Q8NGS0 311 aa7.4□□□□□ -1.22
VPS50-204ENST00000438395 HMGCLL1Q8TB92 370 aa7.4□□□□□ -1.22
VPS50-204ENST00000438395 ZDHHC19Q8WVZ1 309 aaPredicted RBP7.4□□□□□ -1.22
VPS50-204ENST00000438395 INPP5DQ92835 1189 aa7.4□□□□□ -1.22
VPS50-204ENST00000438395 FAM136AQ96C01 138 aa7.4□□□□□ -1.22
VPS50-204ENST00000438395 MVB12AQ96EY5 273 aa7.4□□□□□ -1.22
VPS50-204ENST00000438395 ZNF285Q96NJ3 590 aa7.4□□□□□ -1.22
VPS50-204ENST00000438395 TCF12Q99081 682 aa7.4□□□□□ -1.22
VPS50-204ENST00000438395 MENTQ9BUN1 341 aa7.4□□□□□ -1.22
VPS50-204ENST00000438395 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.4□□□□□ -1.22
VPS50-204ENST00000438395 ZBTB20Q9HC78 741 aaPredicted RBP7.4□□□□□ -1.22
VPS50-204ENST00000438395 MRPS30Q9NP92 439 aaKnown RBP7.4□□□□□ -1.22
VPS50-204ENST00000438395 HOMER3Q9NSC5 361 aa7.4□□□□□ -1.22
VPS50-204ENST00000438395 ABCF3Q9NUQ8 709 aa7.4□□□□□ -1.22
VPS50-204ENST00000438395 RIC8BQ9NVN3 520 aa7.4□□□□□ -1.22
VPS50-204ENST00000438395 PTGFRNQ9P2B2 879 aa7.4□□□□□ -1.22
VPS50-204ENST00000438395 SUCOQ9UBS9 1254 aaKnown RBP7.4□□□□□ -1.22
VPS50-204ENST00000438395 TEKT2Q9UIF3 430 aa7.4□□□□□ -1.22
VPS50-204ENST00000438395 NTNG1Q9Y2I2 539 aa7.4□□□□□ -1.22
VPS50-204ENST00000438395 NFS1Q9Y697 457 aa7.4□□□□□ -1.22
VPS50-204ENST00000438395 LRBAP50851 2863 aa7.39□□□□□ -1.23
VPS50-204ENST00000438395 LOC105369274A0A096LPK9 316 aa7.39□□□□□ -1.23
VPS50-204ENST00000438395 TRAV17A0A0B4J275 112 aa7.39□□□□□ -1.23
VPS50-204ENST00000438395 LOC102723532A0A0G2JNH3 316 aa7.39□□□□□ -1.23
VPS50-204ENST00000438395 A0A1B0GUH1 482 aa7.39□□□□□ -1.23
VPS50-204ENST00000438395 CTAGE9A4FU28 777 aa7.39□□□□□ -1.23
VPS50-204ENST00000438395 PABPN1LA6NDY0 278 aaKnown RBP7.39□□□□□ -1.23
VPS50-204ENST00000438395 IDSB3KWA1 339 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms