RNA–Protein interactions for RNA: ENST00000436601.1

LSM3P3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 3, humanhuman

BASIC

Gene LSM3P3, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P3-201ENST00000436601 NOBOXO60393 691 aa6.79□□□□□ -1.32
LSM3P3-201ENST00000436601 WDR47O94967 919 aa6.79□□□□□ -1.32
LSM3P3-201ENST00000436601 SNUPNO95149 360 aaKnown RBP6.79□□□□□ -1.32
LSM3P3-201ENST00000436601 EPN2O95208 641 aa6.79□□□□□ -1.32
LSM3P3-201ENST00000436601 TGDSO95455 350 aa6.79□□□□□ -1.32
LSM3P3-201ENST00000436601 MLYCDO95822 493 aa6.79□□□□□ -1.32
LSM3P3-201ENST00000436601 FAM107AO95990 144 aa6.79□□□□□ -1.32
LSM3P3-201ENST00000436601 ANXA6P08133 673 aa6.79□□□□□ -1.32
LSM3P3-201ENST00000436601 FGF4P08620 206 aa6.79□□□□□ -1.32
LSM3P3-201ENST00000436601 NID1P14543 1247 aa6.79□□□□□ -1.32
LSM3P3-201ENST00000436601 NPPBP16860 134 aa6.79□□□□□ -1.32
LSM3P3-201ENST00000436601 NDUFS1P28331 727 aa6.79□□□□□ -1.32
LSM3P3-201ENST00000436601 PKLRP30613 574 aa6.79□□□□□ -1.32
LSM3P3-201ENST00000436601 HSD17B2P37059 387 aa6.79□□□□□ -1.32
LSM3P3-201ENST00000436601 MPLP40238 635 aa6.79□□□□□ -1.32
LSM3P3-201ENST00000436601 MASP1P48740 699 aa6.79□□□□□ -1.32
LSM3P3-201ENST00000436601 ARRB1P49407 418 aaPredicted RBP6.79□□□□□ -1.32
LSM3P3-201ENST00000436601 RPL14P50914 215 aaKnown RBP6.79□□□□□ -1.32
LSM3P3-201ENST00000436601 RAB28P51157 221 aa6.79□□□□□ -1.32
LSM3P3-201ENST00000436601 FOXA1P55317 472 aa6.79□□□□□ -1.32
LSM3P3-201ENST00000436601 MAZP56270 477 aaKnown RBP6.79□□□□□ -1.32
LSM3P3-201ENST00000436601 ERVPABLB-1P60509 514 aa6.79□□□□□ -1.32
LSM3P3-201ENST00000436601 NAA20P61599 178 aa6.79□□□□□ -1.32
LSM3P3-201ENST00000436601 TBPL1P62380 186 aa6.79□□□□□ -1.32
LSM3P3-201ENST00000436601 SF3A3Q12874 501 aaKnown RBP eCLIP6.79□□□□□ -1.32
LSM3P3-201ENST00000436601 TRAF3Q13114 568 aa6.79□□□□□ -1.32
LSM3P3-201ENST00000436601 PRKAA1Q13131 559 aa6.79□□□□□ -1.32
LSM3P3-201ENST00000436601 GPR18Q14330 331 aa6.79□□□□□ -1.32
LSM3P3-201ENST00000436601 KIR2DS5Q14953 304 aa6.79□□□□□ -1.32
LSM3P3-201ENST00000436601 CCDC6Q16204 474 aa6.79□□□□□ -1.32
LSM3P3-201ENST00000436601 DEFB133Q30KQ1 61 aa6.79□□□□□ -1.32
LSM3P3-201ENST00000436601 UGT3A2Q3SY77 523 aa6.79□□□□□ -1.32
LSM3P3-201ENST00000436601 TRIM61Q5EBN2 209 aa6.79□□□□□ -1.32
LSM3P3-201ENST00000436601 SUSD1Q6UWL2 747 aa6.79□□□□□ -1.32
LSM3P3-201ENST00000436601 C1orf229Q6ZS94 237 aaPredicted RBP6.79□□□□□ -1.32
LSM3P3-201ENST00000436601 LRRC70Q7Z2Q7 622 aa6.79□□□□□ -1.32
LSM3P3-201ENST00000436601 MAVSQ7Z434 540 aa6.79□□□□□ -1.32
LSM3P3-201ENST00000436601 RABEPKQ7Z6M1 372 aa6.79□□□□□ -1.32
LSM3P3-201ENST00000436601 PIGWQ7Z7B1 504 aa6.79□□□□□ -1.32
LSM3P3-201ENST00000436601 CPLX4Q7Z7G2 160 aa6.79□□□□□ -1.32
LSM3P3-201ENST00000436601 CUZD1Q86UP6 607 aa6.79□□□□□ -1.32
LSM3P3-201ENST00000436601 CRLF3Q8IUI8 442 aa6.79□□□□□ -1.32
LSM3P3-201ENST00000436601 SYTL1Q8IYJ3 562 aa6.79□□□□□ -1.32
LSM3P3-201ENST00000436601 SDR16C5Q8N3Y7 309 aa6.79□□□□□ -1.32
LSM3P3-201ENST00000436601 ARL14Q8N4G2 192 aa6.79□□□□□ -1.32
LSM3P3-201ENST00000436601 KCT2Q8NC54 265 aa6.79□□□□□ -1.32
LSM3P3-201ENST00000436601 GALNT6Q8NCL4 622 aa6.79□□□□□ -1.32
LSM3P3-201ENST00000436601 PRSS33Q8NF86 280 aa6.79□□□□□ -1.32
LSM3P3-201ENST00000436601 OR2I1PQ8NGU4 316 aa6.79□□□□□ -1.32
LSM3P3-201ENST00000436601 OR2L8Q8NGY9 312 aa6.79□□□□□ -1.32
LSM3P3-201ENST00000436601 RFWD2Q8NHY2 731 aa6.79□□□□□ -1.32
LSM3P3-201ENST00000436601 HMGCLL1Q8TB92 370 aa6.79□□□□□ -1.32
LSM3P3-201ENST00000436601 AGR3Q8TD06 166 aa6.79□□□□□ -1.32
LSM3P3-201ENST00000436601 SAP25Q8TEE9 199 aa6.79□□□□□ -1.32
LSM3P3-201ENST00000436601 AGAP11Q8TF27 550 aa6.79□□□□□ -1.32
LSM3P3-201ENST00000436601 ZFPM2Q8WW38 1151 aa6.79□□□□□ -1.32
LSM3P3-201ENST00000436601 JPH3Q8WXH2 748 aaPredicted RBP6.79□□□□□ -1.32
LSM3P3-201ENST00000436601 THOC1Q96FV9 657 aaKnown RBP6.79□□□□□ -1.32
LSM3P3-201ENST00000436601 MED8Q96G25 268 aa6.79□□□□□ -1.32
LSM3P3-201ENST00000436601 ZNF382Q96SR6 550 aa6.79□□□□□ -1.32
LSM3P3-201ENST00000436601 ELAC2Q9BQ52 826 aaKnown RBP6.79□□□□□ -1.32
LSM3P3-201ENST00000436601 FAM107BQ9H098 131 aa6.79□□□□□ -1.32
LSM3P3-201ENST00000436601 ILKAPQ9H0C8 392 aaPredicted RBP6.79□□□□□ -1.32
LSM3P3-201ENST00000436601 ARRDC1-AS1Q9H2J1 176 aa6.79□□□□□ -1.32
LSM3P3-201ENST00000436601 SMOC1Q9H4F8 434 aa6.79□□□□□ -1.32
LSM3P3-201ENST00000436601 GAREM1Q9H706 876 aa6.79□□□□□ -1.32
LSM3P3-201ENST00000436601 KCNK13Q9HB14 408 aa6.79□□□□□ -1.32
LSM3P3-201ENST00000436601 EML4Q9HC35 981 aaKnown RBP6.79□□□□□ -1.32
LSM3P3-201ENST00000436601 MID1IP1Q9NPA3 183 aa6.79□□□□□ -1.32
LSM3P3-201ENST00000436601 POT1Q9NUX5 634 aa6.79□□□□□ -1.32
LSM3P3-201ENST00000436601 DNAJC11Q9NVH1 559 aa6.79□□□□□ -1.32
LSM3P3-201ENST00000436601 SPATA7Q9P0W8 599 aa6.79□□□□□ -1.32
LSM3P3-201ENST00000436601 MARCOQ9UEW3 520 aaPredicted RBP6.79□□□□□ -1.32
LSM3P3-201ENST00000436601 LNPEPQ9UIQ6 1025 aa6.79□□□□□ -1.32
LSM3P3-201ENST00000436601 SH2B3Q9UQQ2 575 aa6.79□□□□□ -1.32
LSM3P3-201ENST00000436601 TRAF6Q9Y4K3 522 aa6.79□□□□□ -1.32
LSM3P3-201ENST00000436601 NUMA1Q14980 2115 aa6.79□□□□□ -1.32
LSM3P3-201ENST00000436601 E7EQ34 232 aa6.78□□□□□ -1.32
LSM3P3-201ENST00000436601 MATN2O00339 956 aa6.78□□□□□ -1.32
LSM3P3-201ENST00000436601 BTN3A3O00478 584 aa6.78□□□□□ -1.32
LSM3P3-201ENST00000436601 RGS13O14921 159 aa6.78□□□□□ -1.32
LSM3P3-201ENST00000436601 PPM1DO15297 605 aa6.78□□□□□ -1.32
LSM3P3-201ENST00000436601 TMPRSS2O15393 492 aa6.78□□□□□ -1.32
LSM3P3-201ENST00000436601 PRICKLE3O43900 615 aaPredicted RBP6.78□□□□□ -1.32
LSM3P3-201ENST00000436601 DFNA5O60443 496 aa6.78□□□□□ -1.32
LSM3P3-201ENST00000436601 ADAM11O75078 769 aa6.78□□□□□ -1.32
LSM3P3-201ENST00000436601 KATNA1O75449 491 aa6.78□□□□□ -1.32
LSM3P3-201ENST00000436601 OR4F21O95013 312 aa6.78□□□□□ -1.32
LSM3P3-201ENST00000436601 ESRRBO95718 433 aa6.78□□□□□ -1.32
LSM3P3-201ENST00000436601 OTCP00480 354 aa6.78□□□□□ -1.32
LSM3P3-201ENST00000436601 VIPP01282 170 aa6.78□□□□□ -1.32
LSM3P3-201ENST00000436601 JUNP05412 331 aaKnown RBP6.78□□□□□ -1.32
LSM3P3-201ENST00000436601 KITP10721 976 aa6.78□□□□□ -1.32
LSM3P3-201ENST00000436601 SLC2A4P14672 509 aa6.78□□□□□ -1.32
LSM3P3-201ENST00000436601 EPHA8P29322 1005 aaPredicted RBP6.78□□□□□ -1.32
LSM3P3-201ENST00000436601 PEBP1P30086 187 aaKnown RBP6.78□□□□□ -1.32
LSM3P3-201ENST00000436601 SHMT2P34897 504 aa6.78□□□□□ -1.32
LSM3P3-201ENST00000436601 PIK3CGP48736 1102 aa6.78□□□□□ -1.32
LSM3P3-201ENST00000436601 PKNOX1P55347 436 aa6.78□□□□□ -1.32
LSM3P3-201ENST00000436601 YBX1P67809 324 aaKnown RBP6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms