RNA–Protein interactions for RNA: ENST00000436177.5

VPS50-203, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-203ENST00000436177 A0A1B0GUH1 482 aa7.39□□□□□ -1.23
VPS50-203ENST00000436177 CTAGE9A4FU28 777 aa7.39□□□□□ -1.23
VPS50-203ENST00000436177 PABPN1LA6NDY0 278 aaKnown RBP7.39□□□□□ -1.23
VPS50-203ENST00000436177 IDSB3KWA1 339 aa7.39□□□□□ -1.23
VPS50-203ENST00000436177 NIPSNAP2O75323 286 aa7.39□□□□□ -1.23
VPS50-203ENST00000436177 CLDN1O95832 211 aa7.39□□□□□ -1.23
VPS50-203ENST00000436177 SYF2O95926 243 aaKnown RBP7.39□□□□□ -1.23
VPS50-203ENST00000436177 ZSCAN5DPP0CG00 497 aa7.39□□□□□ -1.23
VPS50-203ENST00000436177 ETS1P14921 441 aa7.39□□□□□ -1.23
VPS50-203ENST00000436177 EZRP15311 586 aaKnown RBP7.39□□□□□ -1.23
VPS50-203ENST00000436177 MGAT1P26572 445 aa7.39□□□□□ -1.23
VPS50-203ENST00000436177 COL8A1P27658 744 aa7.39□□□□□ -1.23
VPS50-203ENST00000436177 NMBRP28336 390 aa7.39□□□□□ -1.23
VPS50-203ENST00000436177 RPL22P35268 128 aaKnown RBP7.39□□□□□ -1.23
VPS50-203ENST00000436177 CASP6P55212 293 aa7.39□□□□□ -1.23
VPS50-203ENST00000436177 EEF1A2Q05639 463 aaKnown RBP7.39□□□□□ -1.23
VPS50-203ENST00000436177 THOC5Q13769 683 aaKnown RBP7.39□□□□□ -1.23
VPS50-203ENST00000436177 GRB7Q14451 532 aa7.39□□□□□ -1.23
VPS50-203ENST00000436177 ARHGAP19Q14CB8 494 aa7.39□□□□□ -1.23
VPS50-203ENST00000436177 INAQ16352 499 aa7.39□□□□□ -1.23
VPS50-203ENST00000436177 CCNG2Q16589 344 aa7.39□□□□□ -1.23
VPS50-203ENST00000436177 NDUFA9Q16795 377 aa7.39□□□□□ -1.23
VPS50-203ENST00000436177 LONRF1Q17RB8 773 aa7.39□□□□□ -1.23
VPS50-203ENST00000436177 MFSD4BQ5TF39 518 aa7.39□□□□□ -1.23
VPS50-203ENST00000436177 ABHD17BQ5VST6 288 aa7.39□□□□□ -1.23
VPS50-203ENST00000436177 FRMPD2BQ6IN97 320 aa7.39□□□□□ -1.23
VPS50-203ENST00000436177 RIPOR1Q6ZS17 1223 aa7.39□□□□□ -1.23
VPS50-203ENST00000436177 NDUFAF7Q7L592 441 aa7.39□□□□□ -1.23
VPS50-203ENST00000436177 PRUNE1Q86TP1 453 aa7.39□□□□□ -1.23
VPS50-203ENST00000436177 KCNMB4Q86W47 210 aa7.39□□□□□ -1.23
VPS50-203ENST00000436177 OR4N4Q8N0Y3 316 aa7.39□□□□□ -1.23
VPS50-203ENST00000436177 SLC34A3Q8N130 599 aa7.39□□□□□ -1.23
VPS50-203ENST00000436177 OR9A1PQ8NGU1 263 aa7.39□□□□□ -1.23
VPS50-203ENST00000436177 FAR1Q8WVX9 515 aa7.39□□□□□ -1.23
VPS50-203ENST00000436177 METTL21AQ8WXB1 218 aa7.39□□□□□ -1.23
VPS50-203ENST00000436177 C8orf44Q96CB5 159 aa7.39□□□□□ -1.23
VPS50-203ENST00000436177 MOCOSQ96EN8 888 aa7.39□□□□□ -1.23
VPS50-203ENST00000436177 MMABQ96EY8 250 aaPredicted RBP7.39□□□□□ -1.23
VPS50-203ENST00000436177 LMF1Q96S06 567 aa7.39□□□□□ -1.23
VPS50-203ENST00000436177 EBNA1BP2Q99848 306 aaKnown RBP7.39□□□□□ -1.23
VPS50-203ENST00000436177 DRC3Q9H069 523 aa7.39□□□□□ -1.23
VPS50-203ENST00000436177 P2RY12Q9H244 342 aa7.39□□□□□ -1.23
VPS50-203ENST00000436177 SLC24A3Q9HC58 644 aa7.39□□□□□ -1.23
VPS50-203ENST00000436177 MKKSQ9NPJ1 570 aaPredicted RBP7.39□□□□□ -1.23
VPS50-203ENST00000436177 TREX1Q9NSU2 369 aa7.39□□□□□ -1.23
VPS50-203ENST00000436177 TAC3Q9UHF0 121 aa7.39□□□□□ -1.23
VPS50-203ENST00000436177 PCYOX1Q9UHG3 505 aa7.39□□□□□ -1.23
VPS50-203ENST00000436177 ZKSCAN5Q9Y2L8 839 aa7.39□□□□□ -1.23
VPS50-203ENST00000436177 MRPS2Q9Y399 296 aaKnown RBP7.39□□□□□ -1.23
VPS50-203ENST00000436177 KLK4Q9Y5K2 254 aa7.39□□□□□ -1.23
VPS50-203ENST00000436177 CSAG2Q9Y5P2 127 aa7.39□□□□□ -1.23
VPS50-203ENST00000436177 SVILO95425 2214 aa7.39□□□□□ -1.23
VPS50-203ENST00000436177 DIDO1Q9BTC0 2240 aaKnown RBP7.39□□□□□ -1.23
VPS50-203ENST00000436177 PIKFYVEQ9Y2I7 2098 aa7.39□□□□□ -1.23
VPS50-203ENST00000436177 OR2A25A4D2G3 310 aa7.38□□□□□ -1.23
VPS50-203ENST00000436177 KRT87PA6NCN2 255 aa7.38□□□□□ -1.23
VPS50-203ENST00000436177 WIPF3A6NGB9 483 aa7.38□□□□□ -1.23
VPS50-203ENST00000436177 VSTM2BA6NLU5 285 aa7.38□□□□□ -1.23
VPS50-203ENST00000436177 ARHGEF33A8MVX0 844 aa7.38□□□□□ -1.23
VPS50-203ENST00000436177 GOLGA8KD6RF30 607 aa7.38□□□□□ -1.23
VPS50-203ENST00000436177 H0YGG7 62 aa7.38□□□□□ -1.23
VPS50-203ENST00000436177 GOLGA8TH3BQL2 631 aa7.38□□□□□ -1.23
VPS50-203ENST00000436177 HNRNPRO43390 633 aaKnown RBP7.38□□□□□ -1.23
VPS50-203ENST00000436177 NRDCO43847 1150 aa7.38□□□□□ -1.23
VPS50-203ENST00000436177 CEP104O60308 925 aa7.38□□□□□ -1.23
VPS50-203ENST00000436177 JRKO75564 520 aa7.38□□□□□ -1.23
VPS50-203ENST00000436177 BMP10O95393 424 aa7.38□□□□□ -1.23
VPS50-203ENST00000436177 CRYABP02511 175 aaKnown RBP7.38□□□□□ -1.23
VPS50-203ENST00000436177 FGGP02679 453 aa7.38□□□□□ -1.23
VPS50-203ENST00000436177 SERPINA7P05543 415 aa7.38□□□□□ -1.23
VPS50-203ENST00000436177 PRR35P0CG20 571 aa7.38□□□□□ -1.23
VPS50-203ENST00000436177 ICAM2P13598 275 aa7.38□□□□□ -1.23
VPS50-203ENST00000436177 OGNP20774 298 aaKnown RBP7.38□□□□□ -1.23
VPS50-203ENST00000436177 CDC25BP30305 580 aa7.38□□□□□ -1.23
VPS50-203ENST00000436177 AVPR1BP47901 424 aa7.38□□□□□ -1.23
VPS50-203ENST00000436177 VPS41P49754 854 aa7.38□□□□□ -1.23
VPS50-203ENST00000436177 TERF1P54274 439 aa7.38□□□□□ -1.23
VPS50-203ENST00000436177 PNLIPRP1P54315 467 aa7.38□□□□□ -1.23
VPS50-203ENST00000436177 ARF3P61204 181 aaPredicted RBP7.38□□□□□ -1.23
VPS50-203ENST00000436177 ABATP80404 500 aa7.38□□□□□ -1.23
VPS50-203ENST00000436177 RBPJQ06330 500 aa7.38□□□□□ -1.23
VPS50-203ENST00000436177 DHX9Q08211 1270 aaKnown RBP7.38□□□□□ -1.23
VPS50-203ENST00000436177 TYSND1Q2T9J0 566 aa7.38□□□□□ -1.23
VPS50-203ENST00000436177 MINDY4Q4G0A6 757 aa7.38□□□□□ -1.23
VPS50-203ENST00000436177 CCSMST1Q4G0I0 132 aa7.38□□□□□ -1.23
VPS50-203ENST00000436177 VWA2Q5GFL6 755 aa7.38□□□□□ -1.23
VPS50-203ENST00000436177 CTSL3PQ5NE16 218 aa7.38□□□□□ -1.23
VPS50-203ENST00000436177 GARNL3Q5VVW2 1013 aa7.38□□□□□ -1.23
VPS50-203ENST00000436177 ICE2Q659A1 982 aa7.38□□□□□ -1.23
VPS50-203ENST00000436177 ZNF470Q6ECI4 717 aa7.38□□□□□ -1.23
VPS50-203ENST00000436177 FAAH2Q6GMR7 532 aa7.38□□□□□ -1.23
VPS50-203ENST00000436177 KIAA0930Q6ICG6 404 aaPredicted RBP7.38□□□□□ -1.23
VPS50-203ENST00000436177 NEPROQ6NW34 567 aa7.38□□□□□ -1.23
VPS50-203ENST00000436177 DRICH1Q6PGQ1 229 aaPredicted RBP7.38□□□□□ -1.23
VPS50-203ENST00000436177 SUSD1Q6UWL2 747 aa7.38□□□□□ -1.23
VPS50-203ENST00000436177 IGFL2Q6UWQ7 119 aa7.38□□□□□ -1.23
VPS50-203ENST00000436177 GFRALQ6UXV0 394 aa7.38□□□□□ -1.23
VPS50-203ENST00000436177 FJX1Q86VR8 437 aa7.38□□□□□ -1.23
VPS50-203ENST00000436177 SIRT6Q8N6T7 355 aa7.38□□□□□ -1.23
VPS50-203ENST00000436177 OR2A1Q8NGT9 310 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms