RNA–Protein interactions for RNA: ENST00000433892.6

CD44-209, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,292 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-209ENST00000433892 RGS21Q2M5E4 152 aa11.43□□□□□ -0.58
CD44-209ENST00000433892 ZNF648Q5T619 568 aaPredicted RBP11.43□□□□□ -0.58
CD44-209ENST00000433892 CAPN13Q6MZZ7 669 aaPredicted RBP11.43□□□□□ -0.58
CD44-209ENST00000433892 MSANTD1Q6ZTZ1 278 aa11.43□□□□□ -0.58
CD44-209ENST00000433892 Q6ZVU0 165 aa11.43□□□□□ -0.58
CD44-209ENST00000433892 SLC39A11Q8N1S5 342 aa11.43□□□□□ -0.58
CD44-209ENST00000433892 ELMOD1Q8N336 334 aa11.43□□□□□ -0.58
CD44-209ENST00000433892 CPXM2Q8N436 756 aa11.43□□□□□ -0.58
CD44-209ENST00000433892 TTC29Q8NA56 475 aaPredicted RBP11.43□□□□□ -0.58
CD44-209ENST00000433892 ATG16L2Q8NAA4 619 aa11.43□□□□□ -0.58
CD44-209ENST00000433892 NDNFQ8TB73 568 aa11.43□□□□□ -0.58
CD44-209ENST00000433892 FOXJ1Q92949 421 aa11.43□□□□□ -0.58
CD44-209ENST00000433892 SH3YL1Q96HL8 342 aaPredicted RBP11.43□□□□□ -0.58
CD44-209ENST00000433892 ZNF558Q96NG5 402 aa11.43□□□□□ -0.58
CD44-209ENST00000433892 PRM3Q9NNZ6 103 aa11.43□□□□□ -0.58
CD44-209ENST00000433892 KIF17Q9P2E2 1029 aa11.43□□□□□ -0.58
CD44-209ENST00000433892 VPS29Q9UBQ0 182 aa11.43□□□□□ -0.58
CD44-209ENST00000433892 RPS6KA6Q9UK32 745 aa11.43□□□□□ -0.58
CD44-209ENST00000433892 HS3ST2Q9Y278 367 aa11.43□□□□□ -0.58
CD44-209ENST00000433892 BTBD3Q9Y2F9 522 aa11.43□□□□□ -0.58
CD44-209ENST00000433892 PCDHGB1Q9Y5G3 927 aa11.43□□□□□ -0.58
CD44-209ENST00000433892 MYOFQ9NZM1 2061 aa11.43□□□□□ -0.58
CD44-209ENST00000433892 A0A1W2PRU2 124 aa11.43□□□□□ -0.58
CD44-209ENST00000433892 FUOMA2VDF0 154 aa11.43□□□□□ -0.58
CD44-209ENST00000433892 TMEM202A6NGA9 273 aa11.43□□□□□ -0.58
CD44-209ENST00000433892 OR2AG2A6NM03 316 aa11.43□□□□□ -0.58
CD44-209ENST00000433892 E7EQ34 232 aa11.43□□□□□ -0.58
CD44-209ENST00000433892 NPIPB8E9PQR5 432 aa11.43□□□□□ -0.58
CD44-209ENST00000433892 CXCL10P02778 98 aa11.43□□□□□ -0.58
CD44-209ENST00000433892 NUDT7P0C024 238 aa11.43□□□□□ -0.58
CD44-209ENST00000433892 MPC1LP0DKB6 136 aa11.43□□□□□ -0.58
CD44-209ENST00000433892 GPX2P18283 190 aa11.43□□□□□ -0.58
CD44-209ENST00000433892 FPR1P21462 350 aa11.43□□□□□ -0.58
CD44-209ENST00000433892 HOXA9P31269 272 aa11.43□□□□□ -0.58
CD44-209ENST00000433892 AP1S2P56377 157 aa11.43□□□□□ -0.58
CD44-209ENST00000433892 ABRQ12979 859 aa11.43□□□□□ -0.58
CD44-209ENST00000433892 KEAP1Q14145 624 aa11.43□□□□□ -0.58
CD44-209ENST00000433892 ADPRMQ3LIE5 342 aa11.43□□□□□ -0.58
CD44-209ENST00000433892 PLEKHS1Q5SXH7 462 aa11.43□□□□□ -0.58
CD44-209ENST00000433892 ADNP2Q6IQ32 1131 aa11.43□□□□□ -0.58
CD44-209ENST00000433892 PDE12Q6L8Q7 609 aaKnown RBP11.43□□□□□ -0.58
CD44-209ENST00000433892 SLCO6A1Q86UG4 719 aa11.43□□□□□ -0.58
CD44-209ENST00000433892 ZNF540Q8NDQ6 660 aa11.43□□□□□ -0.58
CD44-209ENST00000433892 SH3KBP1Q96B97 665 aa11.43□□□□□ -0.58
CD44-209ENST00000433892 TBC1D20Q96BZ9 403 aa11.43□□□□□ -0.58
CD44-209ENST00000433892 TPD52L3Q96J77 140 aa11.43□□□□□ -0.58
CD44-209ENST00000433892 ZNF347Q96SE7 839 aa11.43□□□□□ -0.58
CD44-209ENST00000433892 DUSP21Q9H596 190 aa11.43□□□□□ -0.58
CD44-209ENST00000433892 ARMC7Q9H6L4 198 aa11.43□□□□□ -0.58
CD44-209ENST00000433892 RASSF1Q9NS23 344 aa11.43□□□□□ -0.58
CD44-209ENST00000433892 TPRKBQ9Y3C4 175 aa11.43□□□□□ -0.58
CD44-209ENST00000433892 LEFTY2O00292 366 aa11.42□□□□□ -0.58
CD44-209ENST00000433892 GABARAPO95166 117 aa11.42□□□□□ -0.58
CD44-209ENST00000433892 POP4O95707 220 aaKnown RBP11.42□□□□□ -0.58
CD44-209ENST00000433892 FADS2O95864 444 aaKnown RBP11.42□□□□□ -0.58
CD44-209ENST00000433892 SEMG1P04279 462 aa11.42□□□□□ -0.58
CD44-209ENST00000433892 ACPPP15309 386 aa11.42□□□□□ -0.58
CD44-209ENST00000433892 JUNDP17535 347 aa11.42□□□□□ -0.58
CD44-209ENST00000433892 AQP1P29972 269 aa11.42□□□□□ -0.58
CD44-209ENST00000433892 MASP1P48740 699 aa11.42□□□□□ -0.58
CD44-209ENST00000433892 RAB15P59190 212 aa11.42□□□□□ -0.58
CD44-209ENST00000433892 VBP1P61758 197 aa11.42□□□□□ -0.58
CD44-209ENST00000433892 OCA2Q04671 838 aa11.42□□□□□ -0.58
CD44-209ENST00000433892 SP140Q13342 867 aa11.42□□□□□ -0.58
CD44-209ENST00000433892 DOC2AQ14183 400 aa11.42□□□□□ -0.58
CD44-209ENST00000433892 ACOX1Q15067 660 aa11.42□□□□□ -0.58
CD44-209ENST00000433892 EGFLAMQ63HQ2 1017 aa11.42□□□□□ -0.58
CD44-209ENST00000433892 ASTLQ6HA08 431 aaPredicted RBP11.42□□□□□ -0.58
CD44-209ENST00000433892 GLMNQ92990 594 aa11.42□□□□□ -0.58
CD44-209ENST00000433892 MED8Q96G25 268 aa11.42□□□□□ -0.58
CD44-209ENST00000433892 LMLNQ96KR4 655 aa11.42□□□□□ -0.58
CD44-209ENST00000433892 APOL4Q9BPW4 351 aa11.42□□□□□ -0.58
CD44-209ENST00000433892 TPT1P8Q9HAU6 139 aa11.42□□□□□ -0.58
CD44-209ENST00000433892 KRT84Q9NSB2 600 aa11.42□□□□□ -0.58
CD44-209ENST00000433892 SIRT5Q9NXA8 310 aa11.42□□□□□ -0.58
CD44-209ENST00000433892 SCN3BQ9NY72 215 aa11.42□□□□□ -0.58
CD44-209ENST00000433892 NDRG4Q9ULP0 352 aaKnown RBP11.42□□□□□ -0.58
CD44-209ENST00000433892 SOBPA7XYQ1 873 aa11.42□□□□□ -0.58
CD44-209ENST00000433892 CLDN25C9JDP6 229 aa11.42□□□□□ -0.58
CD44-209ENST00000433892 SLC16A5O15375 505 aa11.42□□□□□ -0.58
CD44-209ENST00000433892 SGTAO43765 313 aa11.42□□□□□ -0.58
CD44-209ENST00000433892 JRKO75564 520 aa11.42□□□□□ -0.58
CD44-209ENST00000433892 ETHE1O95571 254 aa11.42□□□□□ -0.58
CD44-209ENST00000433892 MT-ND2P03891 347 aa11.42□□□□□ -0.58
CD44-209ENST00000433892 PSMB9P28065 219 aa11.42□□□□□ -0.58
CD44-209ENST00000433892 SLC7A9P82251 487 aa11.42□□□□□ -0.58
CD44-209ENST00000433892 ACSM2AQ08AH3 577 aa11.42□□□□□ -0.58
CD44-209ENST00000433892 CYP2A13Q16696 494 aa11.42□□□□□ -0.58
CD44-209ENST00000433892 CCSMST1Q4G0I0 132 aa11.42□□□□□ -0.58
CD44-209ENST00000433892 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.42□□□□□ -0.58
CD44-209ENST00000433892 LIPJQ5W064 366 aa11.42□□□□□ -0.58
CD44-209ENST00000433892 ACSM2BQ68CK6 577 aa11.42□□□□□ -0.58
CD44-209ENST00000433892 Q6ZVL8 140 aa11.42□□□□□ -0.58
CD44-209ENST00000433892 CBLL1Q75N03 491 aa11.42□□□□□ -0.58
CD44-209ENST00000433892 EIF3MQ7L2H7 374 aaKnown RBP11.42□□□□□ -0.58
CD44-209ENST00000433892 THOC6Q86W42 341 aaKnown RBP11.42□□□□□ -0.58
CD44-209ENST00000433892 TMEM25Q86YD3 366 aa11.42□□□□□ -0.58
CD44-209ENST00000433892 CCDC71Q8IV32 467 aaPredicted RBP11.42□□□□□ -0.58
CD44-209ENST00000433892 PGBD3Q8N328 593 aa11.42□□□□□ -0.58
CD44-209ENST00000433892 OR8J2Q8NGG1 315 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms