RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 ELF4Q99607 663 aaPredicted RBP17.57■□□□□ 0.4
HMGN1-206ENST00000431390 EDEM2Q9BV94 578 aa17.57■□□□□ 0.4
HMGN1-206ENST00000431390 SRMSQ9H3Y6 488 aa17.57■□□□□ 0.4
HMGN1-206ENST00000431390 FRYQ5TBA9 3013 aa17.57■□□□□ 0.4
HMGN1-206ENST00000431390 CHD6Q8TD26 2715 aa17.56■□□□□ 0.4
HMGN1-206ENST00000431390 B4DGG1 531 aa17.56■□□□□ 0.4
HMGN1-206ENST00000431390 RGS14O43566 566 aa17.56■□□□□ 0.4
HMGN1-206ENST00000431390 CCNDBP1O95273 360 aa17.56■□□□□ 0.4
HMGN1-206ENST00000431390 LBPP18428 481 aa17.56■□□□□ 0.4
HMGN1-206ENST00000431390 NCF2P19878 526 aaPredicted RBP17.56■□□□□ 0.4
HMGN1-206ENST00000431390 VARSP26640 1264 aaKnown RBP17.56■□□□□ 0.4
HMGN1-206ENST00000431390 FASLGP48023 281 aa17.56■□□□□ 0.4
HMGN1-206ENST00000431390 ARRB1P49407 418 aaPredicted RBP17.56■□□□□ 0.4
HMGN1-206ENST00000431390 IRX1P78414 480 aaPredicted RBP17.56■□□□□ 0.4
HMGN1-206ENST00000431390 ABATP80404 500 aa17.56■□□□□ 0.4
HMGN1-206ENST00000431390 HHEXQ03014 270 aa17.56■□□□□ 0.4
HMGN1-206ENST00000431390 PRDX1Q06830 199 aaKnown RBP17.56■□□□□ 0.4
HMGN1-206ENST00000431390 PLCL1Q15111 1095 aa17.56■□□□□ 0.4
HMGN1-206ENST00000431390 HIST2H2ACQ16777 129 aaPredicted RBP17.56■□□□□ 0.4
HMGN1-206ENST00000431390 DUOXA1Q1HG43 343 aa17.56■□□□□ 0.4
HMGN1-206ENST00000431390 ICE2Q659A1 982 aa17.56■□□□□ 0.4
HMGN1-206ENST00000431390 HIST2H2AA3Q6FI13 130 aa17.56■□□□□ 0.4
HMGN1-206ENST00000431390 OGFOD2Q6N063 350 aa17.56■□□□□ 0.4
HMGN1-206ENST00000431390 MED27Q6P2C8 311 aa17.56■□□□□ 0.4
HMGN1-206ENST00000431390 OGFOD3Q6PK18 319 aa17.56■□□□□ 0.4
HMGN1-206ENST00000431390 SCIMPQ6UWF3 145 aa17.56■□□□□ 0.4
HMGN1-206ENST00000431390 Q6ZSR9 355 aa17.56■□□□□ 0.4
HMGN1-206ENST00000431390 CCDC121Q6ZUS5 278 aa17.56■□□□□ 0.4
HMGN1-206ENST00000431390 C17orf82Q86X59 251 aaPredicted RBP17.56■□□□□ 0.4
HMGN1-206ENST00000431390 ABHD11Q8NFV4 315 aa17.56■□□□□ 0.4
HMGN1-206ENST00000431390 OR4E2Q8NGC2 313 aa17.56■□□□□ 0.4
HMGN1-206ENST00000431390 OR2A1Q8NGT9 310 aa17.56■□□□□ 0.4
HMGN1-206ENST00000431390 CEP76Q8TAP6 659 aa17.56■□□□□ 0.4
HMGN1-206ENST00000431390 WDR20Q8TBZ3 569 aa17.56■□□□□ 0.4
HMGN1-206ENST00000431390 SELENOMQ8WWX9 145 aa17.56■□□□□ 0.4
HMGN1-206ENST00000431390 SLC22A18Q96BI1 424 aa17.56■□□□□ 0.4
HMGN1-206ENST00000431390 REPS1Q96D71 796 aa17.56■□□□□ 0.4
HMGN1-206ENST00000431390 ACAT2Q9BWD1 397 aa17.56■□□□□ 0.4
HMGN1-206ENST00000431390 CACNA1EQ15878 2313 aa17.56■□□□□ 0.4
HMGN1-206ENST00000431390 PI4KAP42356 2102 aa17.55■□□□□ 0.4
HMGN1-206ENST00000431390 UBOX5O94941 541 aa17.55■□□□□ 0.4
HMGN1-206ENST00000431390 PDYNP01213 254 aa17.55■□□□□ 0.4
HMGN1-206ENST00000431390 CHRM5P08912 532 aaPredicted RBP17.55■□□□□ 0.4
HMGN1-206ENST00000431390 CDH1P12830 882 aa17.55■□□□□ 0.4
HMGN1-206ENST00000431390 PSMB5P28074 263 aa17.55■□□□□ 0.4
HMGN1-206ENST00000431390 ADSLP30566 484 aaPredicted RBP17.55■□□□□ 0.4
HMGN1-206ENST00000431390 NOVA1P51513 510 aaKnown RBP17.55■□□□□ 0.4
HMGN1-206ENST00000431390 GALNTL6Q49A17 601 aa17.55■□□□□ 0.4
HMGN1-206ENST00000431390 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.55■□□□□ 0.4
HMGN1-206ENST00000431390 TMEM26Q6ZUK4 368 aa17.55■□□□□ 0.4
HMGN1-206ENST00000431390 FAM129CQ86XR2 697 aa17.55■□□□□ 0.4
HMGN1-206ENST00000431390 ADGRF3Q8IZF5 1079 aa17.55■□□□□ 0.4
HMGN1-206ENST00000431390 CPSF7Q8N684 471 aaKnown RBP17.55■□□□□ 0.4
HMGN1-206ENST00000431390 OR2T11Q8NH01 316 aa17.55■□□□□ 0.4
HMGN1-206ENST00000431390 UBE2E3Q969T4 207 aa17.55■□□□□ 0.4
HMGN1-206ENST00000431390 PRR11Q96HE9 360 aaPredicted RBP17.55■□□□□ 0.4
HMGN1-206ENST00000431390 CCDC106Q9BWC9 280 aa17.55■□□□□ 0.4
HMGN1-206ENST00000431390 PITHD1Q9GZP4 211 aaPredicted RBP17.55■□□□□ 0.4
HMGN1-206ENST00000431390 ZNF385DQ9H6B1 395 aa17.55■□□□□ 0.4
HMGN1-206ENST00000431390 UCK1Q9HA47 277 aa17.55■□□□□ 0.4
HMGN1-206ENST00000431390 FARSBQ9NSD9 589 aaKnown RBP17.55■□□□□ 0.4
HMGN1-206ENST00000431390 GEMIN8Q9NWZ8 242 aaKnown RBP17.55■□□□□ 0.4
HMGN1-206ENST00000431390 TSC22D4Q9Y3Q8 395 aa17.55■□□□□ 0.4
HMGN1-206ENST00000431390 CCL27Q9Y4X3 112 aa17.55■□□□□ 0.4
HMGN1-206ENST00000431390 KNL1Q8NG31 2342 aa17.55■□□□□ 0.4
HMGN1-206ENST00000431390 C1QTNF9BB2RNN3 333 aa17.54■□□□□ 0.4
HMGN1-206ENST00000431390 UBDO15205 165 aa17.54■□□□□ 0.4
HMGN1-206ENST00000431390 SLC22A2O15244 555 aa17.54■□□□□ 0.4
HMGN1-206ENST00000431390 NOBOXO60393 691 aa17.54■□□□□ 0.4
HMGN1-206ENST00000431390 KIAA0754O94854 1291 aa17.54■□□□□ 0.4
HMGN1-206ENST00000431390 PROS1P07225 676 aa17.54■□□□□ 0.4
HMGN1-206ENST00000431390 C1QTNF9P0C862 333 aa17.54■□□□□ 0.4
HMGN1-206ENST00000431390 HSD3B1P14060 373 aa17.54■□□□□ 0.4
HMGN1-206ENST00000431390 CXCR2P25025 360 aa17.54■□□□□ 0.4
HMGN1-206ENST00000431390 HSD3B2P26439 372 aa17.54■□□□□ 0.4
HMGN1-206ENST00000431390 PEBP1P30086 187 aaKnown RBP17.54■□□□□ 0.4
HMGN1-206ENST00000431390 CSTF3Q12996 717 aaKnown RBP17.54■□□□□ 0.4
HMGN1-206ENST00000431390 SLBPQ14493 270 aaKnown RBP eCLIP17.54■□□□□ 0.4
HMGN1-206ENST00000431390 KIR2DS3Q14952 304 aa17.54■□□□□ 0.4
HMGN1-206ENST00000431390 KRT72Q14CN4 511 aa17.54■□□□□ 0.4
HMGN1-206ENST00000431390 IMPG1Q17R60 797 aa17.54■□□□□ 0.4
HMGN1-206ENST00000431390 ZNF423Q2M1K9 1284 aa17.54■□□□□ 0.4
HMGN1-206ENST00000431390 SMU1Q2TAY7 513 aa17.54■□□□□ 0.4
HMGN1-206ENST00000431390 ATP6AP1LQ52LC2 224 aa17.54■□□□□ 0.4
HMGN1-206ENST00000431390 SPATA19Q7Z5L4 167 aa17.54■□□□□ 0.4
HMGN1-206ENST00000431390 SFTPA2Q8IWL1 248 aa17.54■□□□□ 0.4
HMGN1-206ENST00000431390 LAS2Q8IYD9 372 aa17.54■□□□□ 0.4
HMGN1-206ENST00000431390 KRT78Q8N1N4 520 aa17.54■□□□□ 0.4
HMGN1-206ENST00000431390 OR4K1Q8NGD4 311 aa17.54■□□□□ 0.4
HMGN1-206ENST00000431390 PPP3R2Q96LZ3 170 aa17.54■□□□□ 0.4
HMGN1-206ENST00000431390 PIPSLA2A3N6 862 aa17.53■□□□□ 0.4
HMGN1-206ENST00000431390 CAPN14A8MX76 684 aa17.53■□□□□ 0.4
HMGN1-206ENST00000431390 NPIPB8E9PQR5 432 aa17.53■□□□□ 0.4
HMGN1-206ENST00000431390 LSM1O15116 133 aaKnown RBP17.53■□□□□ 0.4
HMGN1-206ENST00000431390 DFNA5O60443 496 aa17.53■□□□□ 0.4
HMGN1-206ENST00000431390 SDC3O75056 442 aa17.53■□□□□ 0.4
HMGN1-206ENST00000431390 PRPH2P23942 346 aa17.53■□□□□ 0.4
HMGN1-206ENST00000431390 HRH2P25021 359 aa17.53■□□□□ 0.4
HMGN1-206ENST00000431390 ATP4BP51164 291 aa17.53■□□□□ 0.4
HMGN1-206ENST00000431390 CCR8P51685 355 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms