RNA–Protein interactions for RNA: ENST00000430771.2

CHD4-202, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 527 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-202ENST00000430771 DMXL1Q9Y485 3027 aa10.57□□□□□ -0.72
CHD4-202ENST00000430771 IGHV5-51A0A0C4DH38 117 aa10.57□□□□□ -0.72
CHD4-202ENST00000430771 DCDC2BA2VCK2 349 aa10.57□□□□□ -0.72
CHD4-202ENST00000430771 WDR91A4D1P6 747 aa10.57□□□□□ -0.72
CHD4-202ENST00000430771 LRRC14BA6NHZ5 514 aa10.57□□□□□ -0.72
CHD4-202ENST00000430771 SLC9B1P1A6NJY1 282 aa10.57□□□□□ -0.72
CHD4-202ENST00000430771 A8MU76 341 aa10.57□□□□□ -0.72
CHD4-202ENST00000430771 KIF1CO43896 1103 aaKnown RBP10.57□□□□□ -0.72
CHD4-202ENST00000430771 EBLN1P0CF75 366 aa10.57□□□□□ -0.72
CHD4-202ENST00000430771 FGF3P11487 239 aaPredicted RBP10.57□□□□□ -0.72
CHD4-202ENST00000430771 PVRP15151 417 aa10.57□□□□□ -0.72
CHD4-202ENST00000430771 NELFEP18615 380 aaKnown RBP10.57□□□□□ -0.72
CHD4-202ENST00000430771 GRK2P25098 689 aa10.57□□□□□ -0.72
CHD4-202ENST00000430771 GSTM2P28161 218 aa10.57□□□□□ -0.72
CHD4-202ENST00000430771 HNF4AP41235 474 aa10.57□□□□□ -0.72
CHD4-202ENST00000430771 LSSP48449 732 aa10.57□□□□□ -0.72
CHD4-202ENST00000430771 SEPHS1P49903 392 aa10.57□□□□□ -0.72
CHD4-202ENST00000430771 NAGLUP54802 743 aa10.57□□□□□ -0.72
CHD4-202ENST00000430771 PKNOX1P55347 436 aa10.57□□□□□ -0.72
CHD4-202ENST00000430771 WDR4P57081 412 aaKnown RBP10.57□□□□□ -0.72
CHD4-202ENST00000430771 RPS15AP62244 130 aaKnown RBP10.57□□□□□ -0.72
CHD4-202ENST00000430771 PHEXP78562 749 aa10.57□□□□□ -0.72
CHD4-202ENST00000430771 ACY1Q03154 408 aa10.57□□□□□ -0.72
CHD4-202ENST00000430771 ZFP36L1Q07352 338 aaKnown RBP10.57□□□□□ -0.72
CHD4-202ENST00000430771 PCDH1Q08174 1060 aa10.57□□□□□ -0.72
CHD4-202ENST00000430771 TRAF3Q13114 568 aa10.57□□□□□ -0.72
CHD4-202ENST00000430771 CHIT1Q13231 466 aa10.57□□□□□ -0.72
CHD4-202ENST00000430771 RCN2Q14257 317 aa10.57□□□□□ -0.72
CHD4-202ENST00000430771 SLBPQ14493 270 aaKnown RBP eCLIP10.57□□□□□ -0.72
CHD4-202ENST00000430771 CHI3L2Q15782 390 aa10.57□□□□□ -0.72
CHD4-202ENST00000430771 ISXQ2M1V0 245 aa10.57□□□□□ -0.72
CHD4-202ENST00000430771 ZC3H12BQ5HYM0 836 aaKnown RBP10.57□□□□□ -0.72
CHD4-202ENST00000430771 LIPJQ5W064 366 aa10.57□□□□□ -0.72
CHD4-202ENST00000430771 ATG16L1Q676U5 607 aa10.57□□□□□ -0.72
CHD4-202ENST00000430771 GRHL2Q6ISB3 625 aa10.57□□□□□ -0.72
CHD4-202ENST00000430771 FIGLAQ6QHK4 219 aa10.57□□□□□ -0.72
CHD4-202ENST00000430771 ZNF574Q6ZN55 896 aaPredicted RBP10.57□□□□□ -0.72
CHD4-202ENST00000430771 ZCCHC23Q6ZST2 131 aa10.57□□□□□ -0.72
CHD4-202ENST00000430771 GPRIN3Q6ZVF9 776 aa10.57□□□□□ -0.72
CHD4-202ENST00000430771 ARHGAP22Q7Z5H3 698 aa10.57□□□□□ -0.72
CHD4-202ENST00000430771 B3GNT8Q7Z7M8 397 aa10.57□□□□□ -0.72
CHD4-202ENST00000430771 PAQR7Q86WK9 346 aa10.57□□□□□ -0.72
CHD4-202ENST00000430771 MYLK4Q86YV6 388 aaPredicted RBP10.57□□□□□ -0.72
CHD4-202ENST00000430771 FAM20CQ8IXL6 584 aa10.57□□□□□ -0.72
CHD4-202ENST00000430771 AGBL5Q8NDL9 886 aa10.57□□□□□ -0.72
CHD4-202ENST00000430771 RCBTB1Q8NDN9 531 aa10.57□□□□□ -0.72
CHD4-202ENST00000430771 TTLQ8NG68 377 aa10.57□□□□□ -0.72
CHD4-202ENST00000430771 TRPC4APQ8TEL6 797 aa10.57□□□□□ -0.72
CHD4-202ENST00000430771 KLHL6Q8WZ60 621 aa10.57□□□□□ -0.72
CHD4-202ENST00000430771 N4BP2L2Q92802 583 aaPredicted RBP10.57□□□□□ -0.72
CHD4-202ENST00000430771 REPS1Q96D71 796 aa10.57□□□□□ -0.72
CHD4-202ENST00000430771 WDR34Q96EX3 536 aa10.57□□□□□ -0.72
CHD4-202ENST00000430771 SLC41A2Q96JW4 573 aa10.57□□□□□ -0.72
CHD4-202ENST00000430771 CNDP1Q96KN2 507 aa10.57□□□□□ -0.72
CHD4-202ENST00000430771 PPM1MQ96MI6 270 aa10.57□□□□□ -0.72
CHD4-202ENST00000430771 NSUN5Q96P11 429 aaKnown RBP10.57□□□□□ -0.72
CHD4-202ENST00000430771 CMKLR1Q99788 373 aa10.57□□□□□ -0.72
CHD4-202ENST00000430771 ZFYVE21Q9BQ24 234 aa10.57□□□□□ -0.72
CHD4-202ENST00000430771 NTMT1Q9BV86 223 aa10.57□□□□□ -0.72
CHD4-202ENST00000430771 GATA5Q9BWX5 397 aaPredicted RBP10.57□□□□□ -0.72
CHD4-202ENST00000430771 KLHL25Q9H0H3 589 aa10.57□□□□□ -0.72
CHD4-202ENST00000430771 GSTO2Q9H4Y5 243 aa10.57□□□□□ -0.72
CHD4-202ENST00000430771 NOL11Q9H8H0 719 aaKnown RBP10.57□□□□□ -0.72
CHD4-202ENST00000430771 TRPS1Q9UHF7 1281 aa10.57□□□□□ -0.72
CHD4-202ENST00000430771 CFAP54Q96N23 3096 aa10.57□□□□□ -0.72
CHD4-202ENST00000430771 HEATR5BQ9P2D3 2071 aa10.57□□□□□ -0.72
CHD4-202ENST00000430771 CCDC187A0A096LP49 1063 aa10.56□□□□□ -0.72
CHD4-202ENST00000430771 IGKV1-8A0A0C4DH67 115 aa10.56□□□□□ -0.72
CHD4-202ENST00000430771 TRBC2A0A5B9 178 aa10.56□□□□□ -0.72
CHD4-202ENST00000430771 H7BY64 318 aa10.56□□□□□ -0.72
CHD4-202ENST00000430771 HAT1O14929 419 aa10.56□□□□□ -0.72
CHD4-202ENST00000430771 CASC3O15234 703 aaKnown RBP10.56□□□□□ -0.72
CHD4-202ENST00000430771 CRCPO75575 148 aa10.56□□□□□ -0.72
CHD4-202ENST00000430771 CLDN9O95484 217 aa10.56□□□□□ -0.72
CHD4-202ENST00000430771 ENO1P06733 434 aaKnown RBP10.56□□□□□ -0.72
CHD4-202ENST00000430771 MSL3P1P0C860 447 aa10.56□□□□□ -0.72
CHD4-202ENST00000430771 ATXN8OSP0DMR3 200 aa10.56□□□□□ -0.72
CHD4-202ENST00000430771 C1GALT1C1LP0DN25 315 aa10.56□□□□□ -0.72
CHD4-202ENST00000430771 EPORP19235 508 aa10.56□□□□□ -0.72
CHD4-202ENST00000430771 BGNP21810 368 aa10.56□□□□□ -0.72
CHD4-202ENST00000430771 VARSP26640 1264 aaKnown RBP10.56□□□□□ -0.72
CHD4-202ENST00000430771 SERPINB1P30740 379 aa10.56□□□□□ -0.72
CHD4-202ENST00000430771 ATP1A2P50993 1020 aa10.56□□□□□ -0.72
CHD4-202ENST00000430771 CDH13P55290 713 aa10.56□□□□□ -0.72
CHD4-202ENST00000430771 CSNK1G2P78368 415 aa10.56□□□□□ -0.72
CHD4-202ENST00000430771 RELAQ04206 551 aa10.56□□□□□ -0.72
CHD4-202ENST00000430771 GALNT1Q10472 559 aaPredicted RBP10.56□□□□□ -0.72
CHD4-202ENST00000430771 E2F2Q14209 437 aa10.56□□□□□ -0.72
CHD4-202ENST00000430771 HIST2H2ACQ16777 129 aaPredicted RBP10.56□□□□□ -0.72
CHD4-202ENST00000430771 CATSPEREQ5SY80 951 aa10.56□□□□□ -0.72
CHD4-202ENST00000430771 C10orf62Q5T681 223 aaPredicted RBP10.56□□□□□ -0.72
CHD4-202ENST00000430771 FCRL6Q6DN72 434 aa10.56□□□□□ -0.72
CHD4-202ENST00000430771 HIST2H2AA3Q6FI13 130 aa10.56□□□□□ -0.72
CHD4-202ENST00000430771 SLCO4C1Q6ZQN7 724 aa10.56□□□□□ -0.72
CHD4-202ENST00000430771 D2HGDHQ8N465 521 aa10.56□□□□□ -0.72
CHD4-202ENST00000430771 AFAP1L2Q8N4X5 818 aa10.56□□□□□ -0.72
CHD4-202ENST00000430771 ZNF655Q8N720 491 aaPredicted RBP10.56□□□□□ -0.72
CHD4-202ENST00000430771 DCBLD1Q8N8Z6 715 aa10.56□□□□□ -0.72
CHD4-202ENST00000430771 OR52B6Q8NGF0 335 aa10.56□□□□□ -0.72
CHD4-202ENST00000430771 MDM1Q8TC05 714 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms