RNA–Protein interactions for RNA: ENST00000429427.1

SSR4P1-202, Transcript of signal sequence receptor subunit 4 pseudogene 1, humanhuman

TSL 5 BASIC

Gene SSR4P1, Length 967 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P1-202ENST00000429427 VN1R4Q7Z5H5 301 aa17.26■□□□□ 0.35
SSR4P1-202ENST00000429427 SHISA5Q8N114 240 aa17.26■□□□□ 0.35
SSR4P1-202ENST00000429427 TTC29Q8NA56 475 aaPredicted RBP17.26■□□□□ 0.35
SSR4P1-202ENST00000429427 FKBP10Q96AY3 582 aa17.26■□□□□ 0.35
SSR4P1-202ENST00000429427 PDLIM5Q96HC4 596 aaKnown RBP17.26■□□□□ 0.35
SSR4P1-202ENST00000429427 VPS39Q96JC1 886 aa17.26■□□□□ 0.35
SSR4P1-202ENST00000429427 PRAP1Q96NZ9 151 aa17.26■□□□□ 0.35
SSR4P1-202ENST00000429427 OR4K3Q96R72 315 aa17.26■□□□□ 0.35
SSR4P1-202ENST00000429427 C17orf62Q9BQA9 187 aa17.26■□□□□ 0.35
SSR4P1-202ENST00000429427 TRIM4Q9C037 500 aa17.26■□□□□ 0.35
SSR4P1-202ENST00000429427 SLC26A1Q9H2B4 701 aa17.26■□□□□ 0.35
SSR4P1-202ENST00000429427 RHOJQ9H4E5 214 aa17.26■□□□□ 0.35
SSR4P1-202ENST00000429427 MLXIPLQ9NP71 852 aa17.26■□□□□ 0.35
SSR4P1-202ENST00000429427 RUVBL1Q9Y265 456 aaKnown RBP17.26■□□□□ 0.35
SSR4P1-202ENST00000429427 PADI2Q9Y2J8 665 aa17.26■□□□□ 0.35
SSR4P1-202ENST00000429427 MTO1Q9Y2Z2 717 aaKnown RBP17.26■□□□□ 0.35
SSR4P1-202ENST00000429427 MRPS2Q9Y399 296 aaKnown RBP17.26■□□□□ 0.35
SSR4P1-202ENST00000429427 UTP11Q9Y3A2 253 aaKnown RBP17.26■□□□□ 0.35
SSR4P1-202ENST00000429427 MDC1Q14676 2089 aaKnown RBP17.25■□□□□ 0.35
SSR4P1-202ENST00000429427 RELNP78509 3460 aa17.25■□□□□ 0.35
SSR4P1-202ENST00000429427 FLNCQ14315 2725 aa17.25■□□□□ 0.35
SSR4P1-202ENST00000429427 FAM159BA6NKW6 160 aa17.25■□□□□ 0.35
SSR4P1-202ENST00000429427 MKRN2OSH3BPM6 223 aa17.25■□□□□ 0.35
SSR4P1-202ENST00000429427 CDC7O00311 574 aa17.25■□□□□ 0.35
SSR4P1-202ENST00000429427 FOLR3P41439 243 aa17.25■□□□□ 0.35
SSR4P1-202ENST00000429427 RELAQ04206 551 aa17.25■□□□□ 0.35
SSR4P1-202ENST00000429427 SSPNQ14714 243 aa17.25■□□□□ 0.35
SSR4P1-202ENST00000429427 UBAP2Q5T6F2 1119 aaKnown RBP17.25■□□□□ 0.35
SSR4P1-202ENST00000429427 THEMIS2Q5TEJ8 643 aa17.25■□□□□ 0.35
SSR4P1-202ENST00000429427 SHISA6Q6ZSJ9 500 aa17.25■□□□□ 0.35
SSR4P1-202ENST00000429427 CSNK1A1LQ8N752 337 aa17.25■□□□□ 0.35
SSR4P1-202ENST00000429427 PYCR2Q96C36 320 aa17.25■□□□□ 0.35
SSR4P1-202ENST00000429427 LRRC1Q9BTT6 524 aa17.25■□□□□ 0.35
SSR4P1-202ENST00000429427 PHACTR1Q9C0D0 580 aa17.25■□□□□ 0.35
SSR4P1-202ENST00000429427 RAB17Q9H0T7 212 aa17.25■□□□□ 0.35
SSR4P1-202ENST00000429427 WDR54Q9H977 334 aa17.25■□□□□ 0.35
SSR4P1-202ENST00000429427 CAB39LQ9H9S4 337 aa17.25■□□□□ 0.35
SSR4P1-202ENST00000429427 ZDHHC18Q9NUE0 388 aa17.25■□□□□ 0.35
SSR4P1-202ENST00000429427 GPN3Q9UHW5 284 aaPredicted RBP17.25■□□□□ 0.35
SSR4P1-202ENST00000429427 NBASA2RRP1 2371 aa17.25■□□□□ 0.35
SSR4P1-202ENST00000429427 ANKRD12Q6UB98 2062 aa17.25■□□□□ 0.35
SSR4P1-202ENST00000429427 TNRC6AQ8NDV7 1962 aaKnown RBP17.24■□□□□ 0.35
SSR4P1-202ENST00000429427 NPEPPSL1A6NEC2 478 aa17.24■□□□□ 0.35
SSR4P1-202ENST00000429427 VSTM2BA6NLU5 285 aa17.24■□□□□ 0.35
SSR4P1-202ENST00000429427 URI1O94763 535 aaPredicted RBP17.24■□□□□ 0.35
SSR4P1-202ENST00000429427 NPPBP16860 134 aa17.24■□□□□ 0.35
SSR4P1-202ENST00000429427 CCL11P51671 97 aa17.24■□□□□ 0.35
SSR4P1-202ENST00000429427 CSNK1G2P78368 415 aa17.24■□□□□ 0.35
SSR4P1-202ENST00000429427 GUCY2DQ02846 1103 aa17.24■□□□□ 0.35
SSR4P1-202ENST00000429427 FAM214AQ32MH5 1076 aa17.24■□□□□ 0.35
SSR4P1-202ENST00000429427 CYS1Q717R9 158 aa17.24■□□□□ 0.35
SSR4P1-202ENST00000429427 ADCK2Q7Z695 626 aa17.24■□□□□ 0.35
SSR4P1-202ENST00000429427 PALM2Q8IXS6 379 aa17.24■□□□□ 0.35
SSR4P1-202ENST00000429427 NOA1Q8NC60 698 aaKnown RBP17.24■□□□□ 0.35
SSR4P1-202ENST00000429427 OR56A3Q8NH54 315 aa17.24■□□□□ 0.35
SSR4P1-202ENST00000429427 EPN3Q9H201 632 aa17.24■□□□□ 0.35
SSR4P1-202ENST00000429427 LRRC4CQ9HCJ2 640 aa17.24■□□□□ 0.35
SSR4P1-202ENST00000429427 ARL15Q9NXU5 204 aa17.24■□□□□ 0.35
SSR4P1-202ENST00000429427 UTP6Q9NYH9 597 aaKnown RBP17.24■□□□□ 0.35
SSR4P1-202ENST00000429427 J3QKU1 62 aa17.23■□□□□ 0.35
SSR4P1-202ENST00000429427 FOXS1O43638 330 aa17.23■□□□□ 0.35
SSR4P1-202ENST00000429427 FAM155BO75949 473 aa17.23■□□□□ 0.35
SSR4P1-202ENST00000429427 ALBP02768 609 aa17.23■□□□□ 0.35
SSR4P1-202ENST00000429427 CDH1P12830 882 aa17.23■□□□□ 0.35
SSR4P1-202ENST00000429427 GMPRP36959 345 aa17.23■□□□□ 0.35
SSR4P1-202ENST00000429427 BCL6P41182 706 aa17.23■□□□□ 0.35
SSR4P1-202ENST00000429427 EMP3P54852 163 aa17.23■□□□□ 0.35
SSR4P1-202ENST00000429427 AP1S2P56377 157 aa17.23■□□□□ 0.35
SSR4P1-202ENST00000429427 CKAP4Q07065 602 aaKnown RBP17.23■□□□□ 0.35
SSR4P1-202ENST00000429427 EFTUD2Q15029 972 aaKnown RBP eCLIP17.23■□□□□ 0.35
SSR4P1-202ENST00000429427 C3orf62Q6ZUJ4 267 aa17.23■□□□□ 0.35
SSR4P1-202ENST00000429427 ASB18Q6ZVZ8 466 aa17.23■□□□□ 0.35
SSR4P1-202ENST00000429427 CCDC25Q86WR0 208 aa17.23■□□□□ 0.35
SSR4P1-202ENST00000429427 RAB43Q86YS6 212 aa17.23■□□□□ 0.35
SSR4P1-202ENST00000429427 AMER3Q8N944 861 aa17.23■□□□□ 0.35
SSR4P1-202ENST00000429427 FDCSPQ8NFU4 85 aa17.23■□□□□ 0.35
SSR4P1-202ENST00000429427 PTERQ96BW5 349 aa17.23■□□□□ 0.35
SSR4P1-202ENST00000429427 FBXL8Q96CD0 374 aa17.23■□□□□ 0.35
SSR4P1-202ENST00000429427 CABS1Q96KC9 395 aa17.23■□□□□ 0.35
SSR4P1-202ENST00000429427 MACROD1Q9BQ69 325 aa17.23■□□□□ 0.35
SSR4P1-202ENST00000429427 NUDT9Q9BW91 350 aa17.23■□□□□ 0.35
SSR4P1-202ENST00000429427 UNKQ9C0B0 810 aaKnown RBP17.23■□□□□ 0.35
SSR4P1-202ENST00000429427 SOX17Q9H6I2 414 aaPredicted RBP17.23■□□□□ 0.35
SSR4P1-202ENST00000429427 ACSS2Q9NR19 701 aa17.23■□□□□ 0.35
SSR4P1-202ENST00000429427 TMEM184CQ9NVA4 438 aa17.23■□□□□ 0.35
SSR4P1-202ENST00000429427 P4HTMQ9NXG6 502 aa17.23■□□□□ 0.35
SSR4P1-202ENST00000429427 NSMCE4AQ9NXX6 385 aa17.23■□□□□ 0.35
SSR4P1-202ENST00000429427 PCDHGA9Q9Y5G4 932 aaKnown RBP17.23■□□□□ 0.35
SSR4P1-202ENST00000429427 HEMK1Q9Y5R4 338 aaPredicted RBP17.23■□□□□ 0.35
SSR4P1-202ENST00000429427 IGLV3-12A0A075B6K2 115 aa17.22■□□□□ 0.35
SSR4P1-202ENST00000429427 FEZF1A0PJY2 475 aa17.22■□□□□ 0.35
SSR4P1-202ENST00000429427 SOCS6O14544 535 aa17.22■□□□□ 0.35
SSR4P1-202ENST00000429427 FFAR3O14843 346 aa17.22■□□□□ 0.35
SSR4P1-202ENST00000429427 GPR42O15529 346 aa17.22■□□□□ 0.35
SSR4P1-202ENST00000429427 LCMT2O60294 686 aaKnown RBP17.22■□□□□ 0.35
SSR4P1-202ENST00000429427 GUCA1CO95843 209 aa17.22■□□□□ 0.35
SSR4P1-202ENST00000429427 ENO2P09104 434 aaPredicted RBP17.22■□□□□ 0.35
SSR4P1-202ENST00000429427 MAGEA4P43358 317 aa17.22■□□□□ 0.35
SSR4P1-202ENST00000429427 EFNA3P52797 238 aa17.22■□□□□ 0.35
SSR4P1-202ENST00000429427 CAV1Q03135 178 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms