RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 ALPPP05187 535 aa17.53■□□□□ 0.4
PSPC1-202ENST00000427943 GNLYP22749 145 aa17.53■□□□□ 0.4
PSPC1-202ENST00000427943 RGS4P49798 205 aa17.53■□□□□ 0.4
PSPC1-202ENST00000427943 PGGT1BP53609 377 aa17.53■□□□□ 0.4
PSPC1-202ENST00000427943 ABATP80404 500 aa17.53■□□□□ 0.4
PSPC1-202ENST00000427943 SRSF1Q07955 248 aaKnown RBP eCLIP17.53■□□□□ 0.4
PSPC1-202ENST00000427943 AIMP2Q13155 320 aaKnown RBP17.53■□□□□ 0.4
PSPC1-202ENST00000427943 UBAP2LQ14157 1087 aaKnown RBP17.53■□□□□ 0.4
PSPC1-202ENST00000427943 MORF4L2Q15014 288 aa17.53■□□□□ 0.4
PSPC1-202ENST00000427943 INPP5JQ15735 1006 aaPredicted RBP17.53■□□□□ 0.4
PSPC1-202ENST00000427943 TRMT10BQ6PF06 316 aaKnown RBP17.53■□□□□ 0.4
PSPC1-202ENST00000427943 PAQR3Q6TCH7 311 aa17.53■□□□□ 0.4
PSPC1-202ENST00000427943 KIRREL2Q6UWL6 708 aa17.53■□□□□ 0.4
PSPC1-202ENST00000427943 CNTN4Q8IWV2 1026 aa17.53■□□□□ 0.4
PSPC1-202ENST00000427943 MYO1HQ8N1T3 1032 aa17.53■□□□□ 0.4
PSPC1-202ENST00000427943 RERGQ96A58 199 aaPredicted RBP17.53■□□□□ 0.4
PSPC1-202ENST00000427943 PNPLA2Q96AD5 504 aa17.53■□□□□ 0.4
PSPC1-202ENST00000427943 MIEF2Q96C03 454 aa17.53■□□□□ 0.4
PSPC1-202ENST00000427943 LINGO1Q96FE5 620 aa17.53■□□□□ 0.4
PSPC1-202ENST00000427943 OR2A5Q96R48 311 aa17.53■□□□□ 0.4
PSPC1-202ENST00000427943 TRIM31Q9BZY9 425 aa17.53■□□□□ 0.4
PSPC1-202ENST00000427943 ZBTB20Q9HC78 741 aaPredicted RBP17.53■□□□□ 0.4
PSPC1-202ENST00000427943 CCDC177Q9NQR7 707 aaPredicted RBP17.53■□□□□ 0.4
PSPC1-202ENST00000427943 UTP6Q9NYH9 597 aaKnown RBP17.53■□□□□ 0.4
PSPC1-202ENST00000427943 ZNF282Q9UDV7 671 aaPredicted RBP17.53■□□□□ 0.4
PSPC1-202ENST00000427943 VPS4AQ9UN37 437 aa17.53■□□□□ 0.4
PSPC1-202ENST00000427943 PDE10AQ9Y233 779 aa17.53■□□□□ 0.4
PSPC1-202ENST00000427943 MAP4K5Q9Y4K4 846 aa17.53■□□□□ 0.4
PSPC1-202ENST00000427943 H7BY64 318 aa17.52■□□□□ 0.4
PSPC1-202ENST00000427943 ZGLP1P0C6A0 271 aa17.52■□□□□ 0.4
PSPC1-202ENST00000427943 ITGA8P53708 1063 aa17.52■□□□□ 0.4
PSPC1-202ENST00000427943 OCA2Q04671 838 aa17.52■□□□□ 0.4
PSPC1-202ENST00000427943 TUBB8Q3ZCM7 444 aa17.52■□□□□ 0.4
PSPC1-202ENST00000427943 VWA2Q5GFL6 755 aa17.52■□□□□ 0.4
PSPC1-202ENST00000427943 PRAMEF13Q5VWM6 474 aa17.52■□□□□ 0.4
PSPC1-202ENST00000427943 LRRC8EQ6NSJ5 796 aa17.52■□□□□ 0.4
PSPC1-202ENST00000427943 HIBCHQ6NVY1 386 aaPredicted RBP17.52■□□□□ 0.4
PSPC1-202ENST00000427943 SYDE1Q6ZW31 735 aaPredicted RBP17.52■□□□□ 0.4
PSPC1-202ENST00000427943 PDIK1LQ8N165 341 aa17.52■□□□□ 0.4
PSPC1-202ENST00000427943 ANP32BQ92688 251 aaKnown RBP17.52■□□□□ 0.4
PSPC1-202ENST00000427943 PDLIM2Q96JY6 352 aa17.52■□□□□ 0.4
PSPC1-202ENST00000427943 PRAP1Q96NZ9 151 aa17.52■□□□□ 0.4
PSPC1-202ENST00000427943 YIPF2Q9BWQ6 316 aa17.52■□□□□ 0.4
PSPC1-202ENST00000427943 SEMA3GQ9NS98 782 aa17.52■□□□□ 0.4
PSPC1-202ENST00000427943 SH2B3Q9UQQ2 575 aa17.52■□□□□ 0.4
PSPC1-202ENST00000427943 SAR1BQ9Y6B6 198 aa17.52■□□□□ 0.4
PSPC1-202ENST00000427943 LRRK2Q5S007 2527 aa17.52■□□□□ 0.39
PSPC1-202ENST00000427943 CLEC18AA5D8T8 446 aa17.51■□□□□ 0.39
PSPC1-202ENST00000427943 CYSRT1A8MQ03 144 aa17.51■□□□□ 0.39
PSPC1-202ENST00000427943 C8GP07360 202 aa17.51■□□□□ 0.39
PSPC1-202ENST00000427943 SOX8P57073 446 aa17.51■□□□□ 0.39
PSPC1-202ENST00000427943 SNRPNP63162 240 aaKnown RBP17.51■□□□□ 0.39
PSPC1-202ENST00000427943 HIF1AQ16665 826 aa17.51■□□□□ 0.39
PSPC1-202ENST00000427943 PHKG1Q16816 387 aa17.51■□□□□ 0.39
PSPC1-202ENST00000427943 TEDDM1Q5T9Z0 273 aa17.51■□□□□ 0.39
PSPC1-202ENST00000427943 CLEC18BQ6UXF7 455 aa17.51■□□□□ 0.39
PSPC1-202ENST00000427943 KIAA0408Q6ZU52 694 aa17.51■□□□□ 0.39
PSPC1-202ENST00000427943 ANKMY2Q8IV38 441 aa17.51■□□□□ 0.39
PSPC1-202ENST00000427943 PARP9Q8IXQ6 854 aa17.51■□□□□ 0.39
PSPC1-202ENST00000427943 GPATCH11Q8N954 259 aa17.51■□□□□ 0.39
PSPC1-202ENST00000427943 CLEC18CQ8NCF0 446 aa17.51■□□□□ 0.39
PSPC1-202ENST00000427943 GALNT11Q8NCW6 608 aa17.51■□□□□ 0.39
PSPC1-202ENST00000427943 OR11G2Q8NGC1 345 aa17.51■□□□□ 0.39
PSPC1-202ENST00000427943 MCOLN3Q8TDD5 553 aa17.51■□□□□ 0.39
PSPC1-202ENST00000427943 NACC2Q96BF6 587 aa17.51■□□□□ 0.39
PSPC1-202ENST00000427943 ALKBH8Q96BT7 664 aaKnown RBP17.51■□□□□ 0.39
PSPC1-202ENST00000427943 C8orf44Q96CB5 159 aa17.51■□□□□ 0.39
PSPC1-202ENST00000427943 MMABQ96EY8 250 aaPredicted RBP17.51■□□□□ 0.39
PSPC1-202ENST00000427943 RUNDC3BQ96NL0 473 aa17.51■□□□□ 0.39
PSPC1-202ENST00000427943 ATG10Q9H0Y0 220 aa17.51■□□□□ 0.39
PSPC1-202ENST00000427943 TRPC4Q9UBN4 977 aa17.51■□□□□ 0.39
PSPC1-202ENST00000427943 C3orf18Q9UK00 162 aa17.51■□□□□ 0.39
PSPC1-202ENST00000427943 MRPS2Q9Y399 296 aaKnown RBP17.51■□□□□ 0.39
PSPC1-202ENST00000427943 TEX264Q9Y6I9 313 aa17.51■□□□□ 0.39
PSPC1-202ENST00000427943 ESPL1Q14674 2120 aa17.51■□□□□ 0.39
PSPC1-202ENST00000427943 RP1L1Q8IWN7 2480 aaPredicted RBP17.5■□□□□ 0.39
PSPC1-202ENST00000427943 SCN2AQ99250 2005 aa17.5■□□□□ 0.39
PSPC1-202ENST00000427943 A0A0A6YYC8 382 aaPredicted RBP17.5■□□□□ 0.39
PSPC1-202ENST00000427943 I3L1I5 382 aaPredicted RBP17.5■□□□□ 0.39
PSPC1-202ENST00000427943 FANCGO15287 622 aa17.5■□□□□ 0.39
PSPC1-202ENST00000427943 FOXS1O43638 330 aa17.5■□□□□ 0.39
PSPC1-202ENST00000427943 IPO13O94829 963 aaKnown RBP17.5■□□□□ 0.39
PSPC1-202ENST00000427943 EMP3P54852 163 aa17.5■□□□□ 0.39
PSPC1-202ENST00000427943 ARL4CP56559 192 aa17.5■□□□□ 0.39
PSPC1-202ENST00000427943 SP140Q13342 867 aa17.5■□□□□ 0.39
PSPC1-202ENST00000427943 PDAP1Q13442 181 aaKnown RBP17.5■□□□□ 0.39
PSPC1-202ENST00000427943 DSG2Q14126 1118 aa17.5■□□□□ 0.39
PSPC1-202ENST00000427943 SYT16Q17RD7 645 aa17.5■□□□□ 0.39
PSPC1-202ENST00000427943 PLEKHN1Q494U1 663 aaPredicted RBP17.5■□□□□ 0.39
PSPC1-202ENST00000427943 HECTD2Q5U5R9 776 aa17.5■□□□□ 0.39
PSPC1-202ENST00000427943 AGTRAPQ6RW13 159 aa17.5■□□□□ 0.39
PSPC1-202ENST00000427943 PALM2Q8IXS6 379 aa17.5■□□□□ 0.39
PSPC1-202ENST00000427943 ARHGEF39Q8N4T4 335 aa17.5■□□□□ 0.39
PSPC1-202ENST00000427943 AMER3Q8N944 861 aa17.5■□□□□ 0.39
PSPC1-202ENST00000427943 MVB12AQ96EY5 273 aa17.5■□□□□ 0.39
PSPC1-202ENST00000427943 SNF8Q96H20 258 aa17.5■□□□□ 0.39
PSPC1-202ENST00000427943 CCDC138Q96M89 665 aa17.5■□□□□ 0.39
PSPC1-202ENST00000427943 DRC3Q9H069 523 aa17.5■□□□□ 0.39
PSPC1-202ENST00000427943 ILKAPQ9H0C8 392 aaPredicted RBP17.5■□□□□ 0.39
PSPC1-202ENST00000427943 PARVBQ9HBI1 364 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms