RNA–Protein interactions for RNA: ENST00000427897.1

HSPG2-205, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-205ENST00000427897 NDUFA9Q16795 377 aa19.72■□□□□ 0.75
HSPG2-205ENST00000427897 COLEC12Q5KU26 742 aa19.72■□□□□ 0.75
HSPG2-205ENST00000427897 SHISA6Q6ZSJ9 500 aa19.72■□□□□ 0.75
HSPG2-205ENST00000427897 ATL1Q8WXF7 558 aa19.72■□□□□ 0.75
HSPG2-205ENST00000427897 PLAC1Q9HBJ0 212 aa19.72■□□□□ 0.75
HSPG2-205ENST00000427897 SLC22A11Q9NSA0 550 aa19.72■□□□□ 0.75
HSPG2-205ENST00000427897 P4HTMQ9NXG6 502 aa19.72■□□□□ 0.75
HSPG2-205ENST00000427897 ZNF282Q9UDV7 671 aaPredicted RBP19.72■□□□□ 0.75
HSPG2-205ENST00000427897 FAM95CA0A1B0GW59 222 aa19.71■□□□□ 0.75
HSPG2-205ENST00000427897 HAT1O14929 419 aa19.71■□□□□ 0.75
HSPG2-205ENST00000427897 EIF3HO15372 352 aaKnown RBP eCLIP19.71■□□□□ 0.753e-10■■■□□ 15.2
HSPG2-205ENST00000427897 FDXRP22570 491 aa19.71■□□□□ 0.75
HSPG2-205ENST00000427897 GCGRP47871 477 aa19.71■□□□□ 0.75
HSPG2-205ENST00000427897 CSRP3P50461 194 aa19.71■□□□□ 0.75
HSPG2-205ENST00000427897 EMP3P54852 163 aa19.71■□□□□ 0.75
HSPG2-205ENST00000427897 PLTPP55058 493 aa19.71■□□□□ 0.75
HSPG2-205ENST00000427897 CAV1Q03135 178 aa19.71■□□□□ 0.75
HSPG2-205ENST00000427897 RAPSNQ13702 412 aa19.71■□□□□ 0.75
HSPG2-205ENST00000427897 NKG7Q16617 165 aa19.71■□□□□ 0.75
HSPG2-205ENST00000427897 IRAK1BP1Q5VVH5 260 aa19.71■□□□□ 0.75
HSPG2-205ENST00000427897 ZNF425Q6IV72 752 aa19.71■□□□□ 0.75
HSPG2-205ENST00000427897 CAPN13Q6MZZ7 669 aaPredicted RBP19.71■□□□□ 0.75
HSPG2-205ENST00000427897 ZNF572Q7Z3I7 529 aaPredicted RBP19.71■□□□□ 0.75
HSPG2-205ENST00000427897 CCDC25Q86WR0 208 aa19.71■□□□□ 0.75
HSPG2-205ENST00000427897 PLD3Q8IV08 490 aa19.71■□□□□ 0.75
HSPG2-205ENST00000427897 NKAPQ8N5F7 415 aaKnown RBP19.71■□□□□ 0.75
HSPG2-205ENST00000427897 FDCSPQ8NFU4 85 aa19.71■□□□□ 0.75
HSPG2-205ENST00000427897 MIEF2Q96C03 454 aa19.71■□□□□ 0.75
HSPG2-205ENST00000427897 MMABQ96EY8 250 aaPredicted RBP19.71■□□□□ 0.75
HSPG2-205ENST00000427897 OLFM1Q99784 485 aa19.71■□□□□ 0.75
HSPG2-205ENST00000427897 WDR83Q9BRX9 315 aaKnown RBP19.71■□□□□ 0.75
HSPG2-205ENST00000427897 HAUS8Q9BT25 410 aa19.71■□□□□ 0.75
HSPG2-205ENST00000427897 EPN3Q9H201 632 aa19.71■□□□□ 0.75
HSPG2-205ENST00000427897 CLMPQ9H6B4 373 aa19.71■□□□□ 0.75
HSPG2-205ENST00000427897 ATP13A2Q9NQ11 1180 aa19.71■□□□□ 0.75
HSPG2-205ENST00000427897 CUEDC1Q9NWM3 386 aaPredicted RBP19.71■□□□□ 0.75
HSPG2-205ENST00000427897 MOCS1Q9NZB8 636 aa19.71■□□□□ 0.75
HSPG2-205ENST00000427897 RUVBL1Q9Y265 456 aaKnown RBP19.71■□□□□ 0.75
HSPG2-205ENST00000427897 PCDHGB7Q9Y5F8 929 aa19.71■□□□□ 0.75
HSPG2-205ENST00000427897 CCDC88CQ9P219 2028 aa19.7■□□□□ 0.74
HSPG2-205ENST00000427897 IGKV1-8A0A0C4DH67 115 aa19.7■□□□□ 0.74
HSPG2-205ENST00000427897 ESPNB1AK53 854 aa19.7■□□□□ 0.74
HSPG2-205ENST00000427897 ZNF500O60304 480 aaPredicted RBP19.7■□□□□ 0.74
HSPG2-205ENST00000427897 CNOT3O75175 753 aaKnown RBP19.7■□□□□ 0.74
HSPG2-205ENST00000427897 GUCA1CO95843 209 aa19.7■□□□□ 0.74
HSPG2-205ENST00000427897 ONECUT2O95948 504 aa19.7■□□□□ 0.74
HSPG2-205ENST00000427897 AP1S2P56377 157 aa19.7■□□□□ 0.74
HSPG2-205ENST00000427897 FOXL2P58012 376 aa19.7■□□□□ 0.74
HSPG2-205ENST00000427897 RPS15AP62244 130 aaKnown RBP19.7■□□□□ 0.74
HSPG2-205ENST00000427897 RELAQ04206 551 aa19.7■□□□□ 0.74
HSPG2-205ENST00000427897 RBBP7Q16576 425 aa19.7■□□□□ 0.74
HSPG2-205ENST00000427897 HKDC1Q2TB90 917 aa19.7■□□□□ 0.74
HSPG2-205ENST00000427897 GARNL3Q5VVW2 1013 aa19.7■□□□□ 0.74
HSPG2-205ENST00000427897 MBOAT1Q6ZNC8 495 aa19.7■□□□□ 0.74
HSPG2-205ENST00000427897 LRRC56Q8IYG6 542 aaPredicted RBP19.7■□□□□ 0.74
HSPG2-205ENST00000427897 PRSS58Q8IYP2 241 aa19.7■□□□□ 0.74
HSPG2-205ENST00000427897 TBC1D19Q8N5T2 526 aa19.7■□□□□ 0.74
HSPG2-205ENST00000427897 MNS1Q8NEH6 495 aa19.7■□□□□ 0.74
HSPG2-205ENST00000427897 NACC2Q96BF6 587 aa19.7■□□□□ 0.74
HSPG2-205ENST00000427897 OR2A5Q96R48 311 aa19.7■□□□□ 0.74
HSPG2-205ENST00000427897 CRB3Q9BUF7 120 aa19.7■□□□□ 0.74
HSPG2-205ENST00000427897 SLC26A1Q9H2B4 701 aa19.7■□□□□ 0.74
HSPG2-205ENST00000427897 ENAMQ9NRM1 1142 aa19.7■□□□□ 0.74
HSPG2-205ENST00000427897 SEMA3GQ9NS98 782 aa19.7■□□□□ 0.74
HSPG2-205ENST00000427897 PSAT1Q9Y617 370 aa19.7■□□□□ 0.74
HSPG2-205ENST00000427897 AGPSO00116 658 aa19.69■□□□□ 0.74
HSPG2-205ENST00000427897 DPM1O60762 260 aa19.69■□□□□ 0.74
HSPG2-205ENST00000427897 ZIC2O95409 532 aaPredicted RBP19.69■□□□□ 0.74
HSPG2-205ENST00000427897 ALPPP05187 535 aa19.69■□□□□ 0.74
HSPG2-205ENST00000427897 UMODP07911 640 aa19.69■□□□□ 0.74
HSPG2-205ENST00000427897 ENO2P09104 434 aaPredicted RBP19.69■□□□□ 0.74
HSPG2-205ENST00000427897 MMP11P24347 488 aa19.69■□□□□ 0.74
HSPG2-205ENST00000427897 SSTR1P30872 391 aa19.69■□□□□ 0.74
HSPG2-205ENST00000427897 PGGT1BP53609 377 aa19.69■□□□□ 0.74
HSPG2-205ENST00000427897 PRTGQ2VWP7 1150 aa19.69■□□□□ 0.74
HSPG2-205ENST00000427897 DCAF10Q5QP82 559 aa19.69■□□□□ 0.74
HSPG2-205ENST00000427897 DUPD1Q68J44 220 aa19.69■□□□□ 0.74
HSPG2-205ENST00000427897 C3orf62Q6ZUJ4 267 aa19.69■□□□□ 0.74
HSPG2-205ENST00000427897 FRA10AC1Q70Z53 315 aa19.69■□□□□ 0.74
HSPG2-205ENST00000427897 COX15Q7KZN9 410 aa19.69■□□□□ 0.74
HSPG2-205ENST00000427897 ZC3HC1Q86WB0 502 aaKnown RBP19.69■□□□□ 0.74
HSPG2-205ENST00000427897 STT3BQ8TCJ2 826 aa19.69■□□□□ 0.74
HSPG2-205ENST00000427897 MVB12AQ96EY5 273 aa19.69■□□□□ 0.74
HSPG2-205ENST00000427897 DRC3Q9H069 523 aa19.69■□□□□ 0.74
HSPG2-205ENST00000427897 TRPC4Q9UBN4 977 aa19.69■□□□□ 0.74
HSPG2-205ENST00000427897 CTSFQ9UBX1 484 aa19.69■□□□□ 0.74
HSPG2-205ENST00000427897 TTLL8A6PVC2 850 aa19.68■□□□□ 0.74
HSPG2-205ENST00000427897 TP73O15350 636 aa19.68■□□□□ 0.74
HSPG2-205ENST00000427897 PDGFAP04085 211 aa19.68■□□□□ 0.74
HSPG2-205ENST00000427897 AVPR1BP47901 424 aa19.68■□□□□ 0.74
HSPG2-205ENST00000427897 PHKG1Q16816 387 aa19.68■□□□□ 0.74
HSPG2-205ENST00000427897 LCTLQ6UWM7 567 aa19.68■□□□□ 0.74
HSPG2-205ENST00000427897 PPP1R32Q7Z5V6 425 aa19.68■□□□□ 0.74
HSPG2-205ENST00000427897 HPS6Q86YV9 775 aa19.68■□□□□ 0.74
HSPG2-205ENST00000427897 DTWD1Q8N5C7 304 aa19.68■□□□□ 0.74
HSPG2-205ENST00000427897 TSPAN17Q96FV3 270 aa19.68■□□□□ 0.74
HSPG2-205ENST00000427897 PDLIM5Q96HC4 596 aaKnown RBP19.68■□□□□ 0.74
HSPG2-205ENST00000427897 C10orf90Q96M02 699 aa19.68■□□□□ 0.74
HSPG2-205ENST00000427897 EGFL8Q99944 293 aa19.68■□□□□ 0.74
HSPG2-205ENST00000427897 NUDT9Q9BW91 350 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms