RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 ZBTB20Q9HC78 741 aaPredicted RBP12.98□□□□□ -0.33
USP42-203ENST00000426246 C14orf119Q9NWQ9 140 aa12.98□□□□□ -0.33
USP42-203ENST00000426246 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.98□□□□□ -0.33
USP42-203ENST00000426246 ZNF99A8MXY4 864 aaPredicted RBP12.98□□□□□ -0.33
USP42-203ENST00000426246 CLDN25C9JDP6 229 aa12.98□□□□□ -0.33
USP42-203ENST00000426246 PHC1P78364 1004 aa12.98□□□□□ -0.33
USP42-203ENST00000426246 SPIBQ01892 262 aa12.98□□□□□ -0.33
USP42-203ENST00000426246 DBPQ10586 325 aaPredicted RBP12.98□□□□□ -0.33
USP42-203ENST00000426246 OLIG3Q7RTU3 272 aa12.98□□□□□ -0.33
USP42-203ENST00000426246 TRAPPC5Q8IUR0 188 aa12.98□□□□□ -0.33
USP42-203ENST00000426246 CROCCP3Q8IVE0 287 aa12.98□□□□□ -0.33
USP42-203ENST00000426246 C1orf52Q8N6N3 182 aaKnown RBP12.98□□□□□ -0.33
USP42-203ENST00000426246 HSH2DQ96JZ2 352 aa12.98□□□□□ -0.33
USP42-203ENST00000426246 HEPHQ9BQS7 1158 aa12.98□□□□□ -0.33
USP42-203ENST00000426246 C2orf49Q9BVC5 232 aaPredicted RBP12.98□□□□□ -0.33
USP42-203ENST00000426246 OR51B5Q9H339 312 aa12.98□□□□□ -0.33
USP42-203ENST00000426246 PLAGL1Q9UM63 463 aa12.98□□□□□ -0.33
USP42-203ENST00000426246 CCDC88CQ9P219 2028 aa12.97□□□□□ -0.33
USP42-203ENST00000426246 H3BNC9 293 aa12.97□□□□□ -0.33
USP42-203ENST00000426246 NRG2O14511 850 aaPredicted RBP12.97□□□□□ -0.33
USP42-203ENST00000426246 NME6O75414 186 aaPredicted RBP12.97□□□□□ -0.33
USP42-203ENST00000426246 MFN2O95140 757 aa12.97□□□□□ -0.33
USP42-203ENST00000426246 UMPSP11172 480 aa12.97□□□□□ -0.33
USP42-203ENST00000426246 LAMP1P11279 417 aa12.97□□□□□ -0.33
USP42-203ENST00000426246 CLCN7P51798 805 aa12.97□□□□□ -0.33
USP42-203ENST00000426246 VLDLRP98155 873 aa12.97□□□□□ -0.33
USP42-203ENST00000426246 MC1RQ01726 317 aa12.97□□□□□ -0.33
USP42-203ENST00000426246 GALNT1Q10472 559 aaPredicted RBP12.97□□□□□ -0.33
USP42-203ENST00000426246 CCSMST1Q4G0I0 132 aa12.97□□□□□ -0.33
USP42-203ENST00000426246 GPR65Q8IYL9 337 aa12.97□□□□□ -0.33
USP42-203ENST00000426246 KLHL23Q8NBE8 558 aa12.97□□□□□ -0.33
USP42-203ENST00000426246 DMRTB1Q96MA1 342 aa12.97□□□□□ -0.33
USP42-203ENST00000426246 NRTNQ99748 197 aa12.97□□□□□ -0.33
USP42-203ENST00000426246 CAPN10Q9HC96 672 aa12.97□□□□□ -0.33
USP42-203ENST00000426246 HMG20AQ9NP66 347 aa12.97□□□□□ -0.33
USP42-203ENST00000426246 SARDHQ9UL12 918 aa12.97□□□□□ -0.33
USP42-203ENST00000426246 SERPINA4P29622 427 aa12.97□□□□□ -0.33
USP42-203ENST00000426246 RRM2P31350 389 aa12.97□□□□□ -0.33
USP42-203ENST00000426246 GRK3P35626 688 aa12.97□□□□□ -0.33
USP42-203ENST00000426246 RNF144AP50876 292 aaPredicted RBP12.97□□□□□ -0.33
USP42-203ENST00000426246 BCAP31P51572 246 aa12.97□□□□□ -0.33
USP42-203ENST00000426246 RPL26P61254 145 aaKnown RBP12.97□□□□□ -0.33
USP42-203ENST00000426246 RELAQ04206 551 aa12.97□□□□□ -0.33
USP42-203ENST00000426246 HACD2Q6Y1H2 254 aa12.97□□□□□ -0.33
USP42-203ENST00000426246 CHST14Q8NCH0 376 aa12.97□□□□□ -0.33
USP42-203ENST00000426246 RAB2BQ8WUD1 216 aa12.97□□□□□ -0.33
USP42-203ENST00000426246 DUSP12Q9UNI6 340 aa12.97□□□□□ -0.33
USP42-203ENST00000426246 MTCL1Q9Y4B5 1905 aaKnown RBP12.97□□□□□ -0.33
USP42-203ENST00000426246 RFXAPO00287 272 aa12.96□□□□□ -0.33
USP42-203ENST00000426246 GREM1O60565 184 aa12.96□□□□□ -0.33
USP42-203ENST00000426246 ANXA4P09525 319 aaPredicted RBP12.96□□□□□ -0.33
USP42-203ENST00000426246 SERPINB10P48595 397 aa12.96□□□□□ -0.33
USP42-203ENST00000426246 PDCD4Q53EL6 469 aaKnown RBP12.96□□□□□ -0.33
USP42-203ENST00000426246 SPRED1Q7Z699 444 aa12.96□□□□□ -0.33
USP42-203ENST00000426246 DCP2Q8IU60 420 aaKnown RBP12.96□□□□□ -0.33
USP42-203ENST00000426246 TEX26Q8N6G2 289 aa12.96□□□□□ -0.33
USP42-203ENST00000426246 DOK4Q8TEW6 326 aa12.96□□□□□ -0.33
USP42-203ENST00000426246 ING5Q8WYH8 240 aa12.96□□□□□ -0.33
USP42-203ENST00000426246 TANKQ92844 425 aa12.96□□□□□ -0.33
USP42-203ENST00000426246 YME1L1Q96TA2 773 aa12.96□□□□□ -0.33
USP42-203ENST00000426246 PKP4Q99569 1192 aa12.96□□□□□ -0.33
USP42-203ENST00000426246 SH3GL1Q99961 368 aa12.96□□□□□ -0.33
USP42-203ENST00000426246 NUSAP1Q9BXS6 441 aaKnown RBP12.96□□□□□ -0.33
USP42-203ENST00000426246 ALOXE3Q9BYJ1 711 aa12.96□□□□□ -0.33
USP42-203ENST00000426246 PRRG3Q9BZD7 231 aa12.96□□□□□ -0.33
USP42-203ENST00000426246 IL21Q9HBE4 155 aa12.96□□□□□ -0.33
USP42-203ENST00000426246 SGK2Q9HBY8 427 aa12.96□□□□□ -0.33
USP42-203ENST00000426246 C11orf16Q9NQ32 467 aa12.96□□□□□ -0.33
USP42-203ENST00000426246 STX16O14662 325 aa12.96□□□□□ -0.33
USP42-203ENST00000426246 FGF18O76093 207 aa12.96□□□□□ -0.33
USP42-203ENST00000426246 MYO1DO94832 1006 aa12.96□□□□□ -0.33
USP42-203ENST00000426246 ATP4BP51164 291 aa12.96□□□□□ -0.33
USP42-203ENST00000426246 STK40Q8N2I9 435 aa12.96□□□□□ -0.33
USP42-203ENST00000426246 SORBS1Q9BX66 1292 aaKnown RBP12.96□□□□□ -0.33
USP42-203ENST00000426246 ATP13A3Q9H7F0 1226 aa12.96□□□□□ -0.33
USP42-203ENST00000426246 ZNF334Q9HCZ1 680 aaPredicted RBP12.96□□□□□ -0.33
USP42-203ENST00000426246 PAK1IP1Q9NWT1 392 aaPredicted RBP12.96□□□□□ -0.33
USP42-203ENST00000426246 LSM7Q9UK45 103 aaKnown RBP12.96□□□□□ -0.33
USP42-203ENST00000426246 ITM2BQ9Y287 266 aa12.96□□□□□ -0.33
USP42-203ENST00000426246 FAM32AQ9Y421 112 aaKnown RBP12.96□□□□□ -0.33
USP42-203ENST00000426246 SPTBP11277 2137 aa12.96□□□□□ -0.33
USP42-203ENST00000426246 TMEM202A6NGA9 273 aa12.96□□□□□ -0.34
USP42-203ENST00000426246 EPOP01588 193 aa12.96□□□□□ -0.34
USP42-203ENST00000426246 HOXB8P17481 243 aaPredicted RBP12.96□□□□□ -0.34
USP42-203ENST00000426246 EN2P19622 333 aaPredicted RBP12.96□□□□□ -0.34
USP42-203ENST00000426246 CCR7P32248 378 aa12.96□□□□□ -0.34
USP42-203ENST00000426246 SLC26A3P40879 764 aa12.96□□□□□ -0.34
USP42-203ENST00000426246 MVKQ03426 396 aa12.96□□□□□ -0.34
USP42-203ENST00000426246 DMPKQ09013 629 aa12.96□□□□□ -0.34
USP42-203ENST00000426246 TYSND1Q2T9J0 566 aa12.96□□□□□ -0.34
USP42-203ENST00000426246 TNFAIP8L2Q6P589 184 aaPredicted RBP12.96□□□□□ -0.34
USP42-203ENST00000426246 PACRGLQ8N7B6 248 aa12.96□□□□□ -0.34
USP42-203ENST00000426246 DTX3Q8N9I9 347 aa12.96□□□□□ -0.34
USP42-203ENST00000426246 SP7Q8TDD2 431 aaPredicted RBP12.96□□□□□ -0.34
USP42-203ENST00000426246 ADAMTS19Q8TE59 1207 aa12.96□□□□□ -0.34
USP42-203ENST00000426246 ABHD8Q96I13 439 aa12.96□□□□□ -0.34
USP42-203ENST00000426246 PYURFQ96I23 114 aa12.96□□□□□ -0.34
USP42-203ENST00000426246 Q96MT0 163 aa12.96□□□□□ -0.34
USP42-203ENST00000426246 CDK5RAP1Q96SZ6 601 aaKnown RBP12.96□□□□□ -0.34
USP42-203ENST00000426246 TPRKBQ9Y3C4 175 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms