RNA–Protein interactions for RNA: ENST00000425280.1

LDB1-202, Transcript of LIM domain binding 1, humanhuman

TSL 5 BASIC

Gene LDB1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-202ENST00000425280 CHTF18Q8WVB6 975 aa25.54■■□□□ 1.68
LDB1-202ENST00000425280 OR2M4Q96R27 311 aa25.54■■□□□ 1.68
LDB1-202ENST00000425280 ALG2Q9H553 416 aa25.54■■□□□ 1.68
LDB1-202ENST00000425280 PRM3Q9NNZ6 103 aa25.54■■□□□ 1.68
LDB1-202ENST00000425280 TAC3Q9UHF0 121 aa25.54■■□□□ 1.68
LDB1-202ENST00000425280 FOXE1O00358 373 aaPredicted RBP25.54■■□□□ 1.68
LDB1-202ENST00000425280 MAN2B1O00754 1011 aa25.54■■□□□ 1.68
LDB1-202ENST00000425280 RAE1P78406 368 aaKnown RBP25.54■■□□□ 1.68
LDB1-202ENST00000425280 MUM1Q2TAK8 710 aa25.54■■□□□ 1.68
LDB1-202ENST00000425280 SYT12Q8IV01 421 aa25.54■■□□□ 1.68
LDB1-202ENST00000425280 PGBD3Q8N328 593 aa25.54■■□□□ 1.68
LDB1-202ENST00000425280 C1orf52Q8N6N3 182 aaKnown RBP25.54■■□□□ 1.68
LDB1-202ENST00000425280 ZNF740Q8NDX6 193 aa25.54■■□□□ 1.68
LDB1-202ENST00000425280 SMPDL3AQ92484 453 aa25.54■■□□□ 1.68
LDB1-202ENST00000425280 PDXPQ96GD0 296 aa25.54■■□□□ 1.68
LDB1-202ENST00000425280 CAMK1GQ96NX5 476 aa25.54■■□□□ 1.68
LDB1-202ENST00000425280 HHIPQ96QV1 700 aa25.54■■□□□ 1.68
LDB1-202ENST00000425280 POLMQ9NP87 494 aaPredicted RBP25.54■■□□□ 1.68
LDB1-202ENST00000425280 PRDM8Q9NQV8 689 aa25.54■■□□□ 1.68
LDB1-202ENST00000425280 TCRBV3S1A0A5B6 114 aa25.53■■□□□ 1.68
LDB1-202ENST00000425280 SEMA4FO95754 770 aa25.53■■□□□ 1.68
LDB1-202ENST00000425280 CHRNB1P11230 501 aa25.53■■□□□ 1.68
LDB1-202ENST00000425280 ATP6V1B2P21281 511 aa25.53■■□□□ 1.68
LDB1-202ENST00000425280 S100A3P33764 101 aa25.53■■□□□ 1.68
LDB1-202ENST00000425280 RHDQ02161 417 aa25.53■■□□□ 1.68
LDB1-202ENST00000425280 UAP1L1Q3KQV9 507 aa25.53■■□□□ 1.68
LDB1-202ENST00000425280 FAM129CQ86XR2 697 aa25.53■■□□□ 1.68
LDB1-202ENST00000425280 PQLC1Q8N2U9 271 aa25.53■■□□□ 1.68
LDB1-202ENST00000425280 GFM2Q969S9 779 aaKnown RBP25.53■■□□□ 1.68
LDB1-202ENST00000425280 WDR92Q96MX6 357 aa25.53■■□□□ 1.68
LDB1-202ENST00000425280 DMRT3Q9NQL9 472 aa25.53■■□□□ 1.68
LDB1-202ENST00000425280 EGFL7Q9UHF1 273 aa25.53■■□□□ 1.68
LDB1-202ENST00000425280 A0A1W2PPV9 198 aa25.52■■□□□ 1.68
LDB1-202ENST00000425280 PDZK1P1A8MUH7 402 aa25.52■■□□□ 1.68
LDB1-202ENST00000425280 C10orf142B7Z368 130 aa25.52■■□□□ 1.68
LDB1-202ENST00000425280 DFNA5O60443 496 aa25.52■■□□□ 1.68
LDB1-202ENST00000425280 STAMBPO95630 424 aa25.52■■□□□ 1.68
LDB1-202ENST00000425280 SELPLGQ14242 412 aa25.52■■□□□ 1.68
LDB1-202ENST00000425280 GCNT7Q6ZNI0 430 aa25.52■■□□□ 1.68
LDB1-202ENST00000425280 C17orf64Q86WR6 236 aa25.52■■□□□ 1.68
LDB1-202ENST00000425280 KBTBD2Q8IY47 623 aa25.52■■□□□ 1.68
LDB1-202ENST00000425280 LINC01555Q8NAE3 123 aa25.52■■□□□ 1.68
LDB1-202ENST00000425280 DNAJC9Q8WXX5 260 aa25.52■■□□□ 1.68
LDB1-202ENST00000425280 HLA-CQ95604 372 aa25.52■■□□□ 1.68
LDB1-202ENST00000425280 ZUFSPQ96AP4 578 aa25.52■■□□□ 1.68
LDB1-202ENST00000425280 VAPAQ9P0L0 249 aa25.52■■□□□ 1.68
LDB1-202ENST00000425280 PRSS51A0A1B0GVH4 220 aa25.52■■□□□ 1.68
LDB1-202ENST00000425280 OR52A4PA6NMU1 304 aa25.52■■□□□ 1.68
LDB1-202ENST00000425280 MYO1DO94832 1006 aa25.52■■□□□ 1.68
LDB1-202ENST00000425280 TAF11Q15544 211 aa25.52■■□□□ 1.68
LDB1-202ENST00000425280 SPIN4Q56A73 249 aa25.52■■□□□ 1.68
LDB1-202ENST00000425280 ZNF852Q6ZMS4 543 aa25.52■■□□□ 1.68
LDB1-202ENST00000425280 IFNEQ86WN2 208 aa25.52■■□□□ 1.68
LDB1-202ENST00000425280 SH3KBP1Q96B97 665 aa25.52■■□□□ 1.68
LDB1-202ENST00000425280 LRGUKQ96M69 825 aa25.52■■□□□ 1.68
LDB1-202ENST00000425280 KCTD14Q9BQ13 255 aaPredicted RBP25.52■■□□□ 1.68
LDB1-202ENST00000425280 PCBD2Q9H0N5 130 aa25.52■■□□□ 1.68
LDB1-202ENST00000425280 C6orf203Q9P0P8 240 aaPredicted RBP25.52■■□□□ 1.68
LDB1-202ENST00000425280 AKAP10O43572 662 aa25.51■■□□□ 1.67
LDB1-202ENST00000425280 APBB3O95704 486 aa25.51■■□□□ 1.67
LDB1-202ENST00000425280 PRPS1L1P21108 318 aa25.51■■□□□ 1.67
LDB1-202ENST00000425280 PSMB5P28074 263 aa25.51■■□□□ 1.67
LDB1-202ENST00000425280 DGKEP52429 567 aa25.51■■□□□ 1.67
LDB1-202ENST00000425280 MTPNP58546 118 aa25.51■■□□□ 1.67
LDB1-202ENST00000425280 CTBSQ01459 385 aa25.51■■□□□ 1.67
LDB1-202ENST00000425280 PGS1Q32NB8 556 aa25.51■■□□□ 1.67
LDB1-202ENST00000425280 ZNF687Q8N1G0 1237 aa25.51■■□□□ 1.67
LDB1-202ENST00000425280 GPR156Q8NFN8 814 aa25.51■■□□□ 1.67
LDB1-202ENST00000425280 UBE2E3Q969T4 207 aa25.51■■□□□ 1.67
LDB1-202ENST00000425280 PELI2Q9HAT8 420 aa25.51■■□□□ 1.67
LDB1-202ENST00000425280 ACTR3BQ9P1U1 418 aa25.51■■□□□ 1.67
LDB1-202ENST00000425280 TSC22D4Q9Y3Q8 395 aa25.51■■□□□ 1.67
LDB1-202ENST00000425280 PRMT3O60678 531 aa25.51■■□□□ 1.67
LDB1-202ENST00000425280 AKT2P31751 481 aa25.51■■□□□ 1.67
LDB1-202ENST00000425280 RPE65Q16518 533 aa25.51■■□□□ 1.67
LDB1-202ENST00000425280 MSRB3Q8IXL7 192 aa25.51■■□□□ 1.67
LDB1-202ENST00000425280 RAB42Q8N4Z0 105 aa25.51■■□□□ 1.67
LDB1-202ENST00000425280 OR8J3Q8NGG0 315 aa25.51■■□□□ 1.67
LDB1-202ENST00000425280 DUS3LQ96G46 650 aaKnown RBP25.51■■□□□ 1.67
LDB1-202ENST00000425280 ZNF570Q96NI8 536 aa25.51■■□□□ 1.67
LDB1-202ENST00000425280 MVB12BQ9H7P6 319 aa25.51■■□□□ 1.67
LDB1-202ENST00000425280 SERHLQ9NQF3 203 aa25.51■■□□□ 1.67
LDB1-202ENST00000425280 CUEDC1Q9NWM3 386 aaPredicted RBP25.51■■□□□ 1.67
LDB1-202ENST00000425280 SCHIP1Q9P0W5 487 aaPredicted RBP25.51■■□□□ 1.67
LDB1-202ENST00000425280 CASQ2O14958 399 aaPredicted RBP25.5■■□□□ 1.67
LDB1-202ENST00000425280 IGLV3-19P01714 112 aa25.5■■□□□ 1.67
LDB1-202ENST00000425280 PIK3CBP42338 1070 aa25.5■■□□□ 1.67
LDB1-202ENST00000425280 LPCAT4Q643R3 524 aa25.5■■□□□ 1.67
LDB1-202ENST00000425280 LCN8Q6JVE9 175 aa25.5■■□□□ 1.67
LDB1-202ENST00000425280 TMIGD1Q6UXZ0 262 aa25.5■■□□□ 1.67
LDB1-202ENST00000425280 PTRH1Q86Y79 214 aaKnown RBP25.5■■□□□ 1.67
LDB1-202ENST00000425280 KRT78Q8N1N4 520 aa25.5■■□□□ 1.67
LDB1-202ENST00000425280 TSACCQ96A04 125 aaPredicted RBP25.5■■□□□ 1.67
LDB1-202ENST00000425280 XKR8Q9H6D3 395 aa25.5■■□□□ 1.67
LDB1-202ENST00000425280 C6orf106Q9H6K1 298 aaPredicted RBP25.5■■□□□ 1.67
LDB1-202ENST00000425280 WASH6PQ9NQA3 447 aa25.5■■□□□ 1.67
LDB1-202ENST00000425280 C2orf42Q9NWW7 574 aa25.5■■□□□ 1.67
LDB1-202ENST00000425280 SLC25A37Q9NYZ2 338 aa25.5■■□□□ 1.67
LDB1-202ENST00000425280 CA14Q9ULX7 337 aa25.5■■□□□ 1.67
LDB1-202ENST00000425280 USP22Q9UPT9 525 aa25.5■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms