RNA–Protein interactions for RNA: ENST00000422489.1

NUP50-206, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-206ENST00000422489 FHL5Q5TD97 284 aa8.85□□□□□ -0.99
NUP50-206ENST00000422489 AGAP7PQ5VUJ5 663 aa8.85□□□□□ -0.99
NUP50-206ENST00000422489 PRAMEF13Q5VWM6 474 aa8.85□□□□□ -0.99
NUP50-206ENST00000422489 FAAH2Q6GMR7 532 aa8.85□□□□□ -0.99
NUP50-206ENST00000422489 PAQR3Q6TCH7 311 aa8.85□□□□□ -0.99
NUP50-206ENST00000422489 LINC00696Q6ZRV3 163 aa8.85□□□□□ -0.99
NUP50-206ENST00000422489 LAPTM4BQ86VI4 370 aa8.85□□□□□ -0.99
NUP50-206ENST00000422489 IGDCC3Q8IVU1 814 aa8.85□□□□□ -0.99
NUP50-206ENST00000422489 IQCKQ8N0W5 287 aa8.85□□□□□ -0.99
NUP50-206ENST00000422489 PDIK1LQ8N165 341 aa8.85□□□□□ -0.99
NUP50-206ENST00000422489 MYO1HQ8N1T3 1032 aa8.85□□□□□ -0.99
NUP50-206ENST00000422489 FAM26EQ8N5C1 309 aa8.85□□□□□ -0.99
NUP50-206ENST00000422489 GPATCH11Q8N954 259 aa8.85□□□□□ -0.99
NUP50-206ENST00000422489 Q8NA96 180 aa8.85□□□□□ -0.99
NUP50-206ENST00000422489 FBXO15Q8NCQ5 510 aaPredicted RBP8.85□□□□□ -0.99
NUP50-206ENST00000422489 C2CD4AQ8NCU7 369 aaPredicted RBP8.85□□□□□ -0.99
NUP50-206ENST00000422489 GALNT11Q8NCW6 608 aa8.85□□□□□ -0.99
NUP50-206ENST00000422489 PRR7Q8TB68 274 aa8.85□□□□□ -0.99
NUP50-206ENST00000422489 DNAJB14Q8TBM8 379 aa8.85□□□□□ -0.99
NUP50-206ENST00000422489 NACC2Q96BF6 587 aa8.85□□□□□ -0.99
NUP50-206ENST00000422489 C8orf44Q96CB5 159 aa8.85□□□□□ -0.99
NUP50-206ENST00000422489 LINGO1Q96FE5 620 aa8.85□□□□□ -0.99
NUP50-206ENST00000422489 THOC3Q96J01 351 aaKnown RBP8.85□□□□□ -0.99
NUP50-206ENST00000422489 HIST1H2AHQ96KK5 128 aa8.85□□□□□ -0.99
NUP50-206ENST00000422489 C10orf90Q96M02 699 aa8.85□□□□□ -0.99
NUP50-206ENST00000422489 CCDC138Q96M89 665 aa8.85□□□□□ -0.99
NUP50-206ENST00000422489 AGAP4Q96P64 663 aa8.85□□□□□ -0.99
NUP50-206ENST00000422489 OR2A5Q96R48 311 aa8.85□□□□□ -0.99
NUP50-206ENST00000422489 HIST1H2AJQ99878 128 aa8.85□□□□□ -0.99
NUP50-206ENST00000422489 MACROD1Q9BQ69 325 aa8.85□□□□□ -0.99
NUP50-206ENST00000422489 NAT9Q9BTE0 207 aa8.85□□□□□ -0.99
NUP50-206ENST00000422489 H2AFJQ9BTM1 129 aa8.85□□□□□ -0.99
NUP50-206ENST00000422489 TRIM31Q9BZY9 425 aa8.85□□□□□ -0.99
NUP50-206ENST00000422489 ATG10Q9H0Y0 220 aa8.85□□□□□ -0.99
NUP50-206ENST00000422489 ZNF160Q9HCG1 818 aa8.85□□□□□ -0.99
NUP50-206ENST00000422489 LRRC4CQ9HCJ2 640 aa8.85□□□□□ -0.99
NUP50-206ENST00000422489 CUEDC1Q9NWM3 386 aaPredicted RBP8.85□□□□□ -0.99
NUP50-206ENST00000422489 SLC17A6Q9P2U8 582 aa8.85□□□□□ -0.99
NUP50-206ENST00000422489 C3orf18Q9UK00 162 aa8.85□□□□□ -0.99
NUP50-206ENST00000422489 B3GNT3Q9Y2A9 372 aa8.85□□□□□ -0.99
NUP50-206ENST00000422489 BLACEA4D250 179 aa8.84□□□□□ -0.99
NUP50-206ENST00000422489 CYSRT1A8MQ03 144 aa8.84□□□□□ -0.99
NUP50-206ENST00000422489 TCP11X1B4DZS4 312 aa8.84□□□□□ -0.99
NUP50-206ENST00000422489 TXNDC9O14530 226 aa8.84□□□□□ -0.99
NUP50-206ENST00000422489 MAP2K7O14733 419 aa8.84□□□□□ -0.99
NUP50-206ENST00000422489 PRPF4O43172 522 aaKnown RBP eCLIP8.84□□□□□ -0.99
NUP50-206ENST00000422489 UQCRHP07919 91 aa8.84□□□□□ -0.99
NUP50-206ENST00000422489 VARSP26640 1264 aaKnown RBP8.84□□□□□ -0.99
NUP50-206ENST00000422489 GABRB3P28472 473 aa8.84□□□□□ -0.99
NUP50-206ENST00000422489 IMPA1P29218 277 aa8.84□□□□□ -0.99
NUP50-206ENST00000422489 PGGT1BP53609 377 aa8.84□□□□□ -0.99
NUP50-206ENST00000422489 CDKN2DP55273 166 aa8.84□□□□□ -0.99
NUP50-206ENST00000422489 SOX8P57073 446 aa8.84□□□□□ -0.99
NUP50-206ENST00000422489 IL2P60568 153 aa8.84□□□□□ -0.99
NUP50-206ENST00000422489 SRSF1Q07955 248 aaKnown RBP eCLIP8.84□□□□□ -0.99
NUP50-206ENST00000422489 NAE1Q13564 534 aa8.84□□□□□ -0.99
NUP50-206ENST00000422489 HIF1AQ16665 826 aa8.84□□□□□ -0.99
NUP50-206ENST00000422489 NDUFA9Q16795 377 aa8.84□□□□□ -0.99
NUP50-206ENST00000422489 SYT16Q17RD7 645 aa8.84□□□□□ -0.99
NUP50-206ENST00000422489 RBM20Q5T481 1227 aaKnown RBP8.84□□□□□ -0.99
NUP50-206ENST00000422489 TEDDM1Q5T9Z0 273 aa8.84□□□□□ -0.99
NUP50-206ENST00000422489 MFSD4BQ5TF39 518 aa8.84□□□□□ -0.99
NUP50-206ENST00000422489 ZNF425Q6IV72 752 aa8.84□□□□□ -0.99
NUP50-206ENST00000422489 AGTRAPQ6RW13 159 aa8.84□□□□□ -0.99
NUP50-206ENST00000422489 ANKMY2Q8IV38 441 aa8.84□□□□□ -0.99
NUP50-206ENST00000422489 LRRC56Q8IYG6 542 aaPredicted RBP8.84□□□□□ -0.99
NUP50-206ENST00000422489 OR11G2Q8NGC1 345 aa8.84□□□□□ -0.99
NUP50-206ENST00000422489 SNRNP40Q96DI7 357 aaKnown RBP8.84□□□□□ -0.99
NUP50-206ENST00000422489 CERS2Q96G23 380 aa8.84□□□□□ -0.99
NUP50-206ENST00000422489 NAPGQ99747 312 aaPredicted RBP8.84□□□□□ -0.99
NUP50-206ENST00000422489 MESP1Q9BRJ9 268 aa8.84□□□□□ -0.99
NUP50-206ENST00000422489 TRIM54Q9BYV2 358 aa8.84□□□□□ -0.99
NUP50-206ENST00000422489 SLC29A3Q9BZD2 475 aa8.84□□□□□ -0.99
NUP50-206ENST00000422489 LHPPQ9H008 270 aa8.84□□□□□ -0.99
NUP50-206ENST00000422489 SYNPO2LQ9H987 977 aa8.84□□□□□ -0.99
NUP50-206ENST00000422489 PARVBQ9HBI1 364 aa8.84□□□□□ -0.99
NUP50-206ENST00000422489 CCDC177Q9NQR7 707 aaPredicted RBP8.84□□□□□ -0.99
NUP50-206ENST00000422489 TMEM184CQ9NVA4 438 aa8.84□□□□□ -0.99
NUP50-206ENST00000422489 ASF1BQ9NVP2 202 aa8.84□□□□□ -0.99
NUP50-206ENST00000422489 CHMP2BQ9UQN3 213 aa8.84□□□□□ -0.99
NUP50-206ENST00000422489 PDE10AQ9Y233 779 aa8.84□□□□□ -0.99
NUP50-206ENST00000422489 VWA7Q9Y334 891 aa8.84□□□□□ -0.99
NUP50-206ENST00000422489 COPG1Q9Y678 874 aaKnown RBP8.84□□□□□ -0.99
NUP50-206ENST00000422489 SAR1BQ9Y6B6 198 aa8.84□□□□□ -0.99
NUP50-206ENST00000422489 TLN1Q9Y490 2541 aaKnown RBP8.83□□□□□ -1
NUP50-206ENST00000422489 NSG1A0A0A6YYJ2 146 aa8.83□□□□□ -1
NUP50-206ENST00000422489 FEZF1A0PJY2 475 aa8.83□□□□□ -1
NUP50-206ENST00000422489 IDSB3KWA1 339 aa8.83□□□□□ -1
NUP50-206ENST00000422489 EIF3FO00303 357 aaPredicted RBP8.83□□□□□ -1
NUP50-206ENST00000422489 SLC16A5O15375 505 aa8.83□□□□□ -1
NUP50-206ENST00000422489 P2RX6O15547 441 aa8.83□□□□□ -1
NUP50-206ENST00000422489 TTI1O43156 1089 aa8.83□□□□□ -1
NUP50-206ENST00000422489 FOXS1O43638 330 aa8.83□□□□□ -1
NUP50-206ENST00000422489 WFS1O76024 890 aa8.83□□□□□ -1
NUP50-206ENST00000422489 C8GP07360 202 aa8.83□□□□□ -1
NUP50-206ENST00000422489 ACPPP15309 386 aa8.83□□□□□ -1
NUP50-206ENST00000422489 EZRP15311 586 aaKnown RBP8.83□□□□□ -1
NUP50-206ENST00000422489 HRH2P25021 359 aa8.83□□□□□ -1
NUP50-206ENST00000422489 IVDP26440 423 aa8.83□□□□□ -1
NUP50-206ENST00000422489 AVPR1BP47901 424 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms