RNA–Protein interactions for RNA: ENST00000421756.5

MCF2L-213, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-213ENST00000421756 H3BM21 787 aa12.91□□□□□ -0.34
MCF2L-213ENST00000421756 PIM1P11309 404 aaPredicted RBP12.91□□□□□ -0.34
MCF2L-213ENST00000421756 ETFAP13804 333 aa12.91□□□□□ -0.34
MCF2L-213ENST00000421756 PFN3P60673 137 aa12.91□□□□□ -0.34
MCF2L-213ENST00000421756 VBP1P61758 197 aa12.91□□□□□ -0.34
MCF2L-213ENST00000421756 UGT8Q16880 541 aa12.91□□□□□ -0.34
MCF2L-213ENST00000421756 FNDC3BQ53EP0 1204 aaKnown RBP12.91□□□□□ -0.34
MCF2L-213ENST00000421756 C12orf40Q86WS4 652 aa12.91□□□□□ -0.34
MCF2L-213ENST00000421756 ERI1Q8IV48 349 aaKnown RBP12.91□□□□□ -0.34
MCF2L-213ENST00000421756 DPP10Q8N608 796 aa12.91□□□□□ -0.34
MCF2L-213ENST00000421756 HUS1BQ8NHY5 278 aa12.91□□□□□ -0.34
MCF2L-213ENST00000421756 GIPC3Q8TF64 312 aa12.91□□□□□ -0.34
MCF2L-213ENST00000421756 VWCEQ96DN2 955 aa12.91□□□□□ -0.34
MCF2L-213ENST00000421756 TM7SF3Q9NS93 570 aa12.91□□□□□ -0.34
MCF2L-213ENST00000421756 FZD4Q9ULV1 537 aa12.91□□□□□ -0.34
MCF2L-213ENST00000421756 SYNDIG1LA6NDD5 238 aa12.91□□□□□ -0.34
MCF2L-213ENST00000421756 GRXCR1A8MXD5 290 aa12.91□□□□□ -0.34
MCF2L-213ENST00000421756 ANGPTL1O95841 491 aa12.91□□□□□ -0.34
MCF2L-213ENST00000421756 NFE2L1Q14494 772 aa12.91□□□□□ -0.34
MCF2L-213ENST00000421756 ADRM1Q16186 407 aa12.91□□□□□ -0.34
MCF2L-213ENST00000421756 BROXQ5VW32 411 aa12.91□□□□□ -0.34
MCF2L-213ENST00000421756 HTR3DQ70Z44 454 aa12.91□□□□□ -0.34
MCF2L-213ENST00000421756 MMAAQ8IVH4 418 aaKnown RBP12.91□□□□□ -0.34
MCF2L-213ENST00000421756 NAGSQ8N159 534 aa12.91□□□□□ -0.34
MCF2L-213ENST00000421756 POF1BQ8WVV4 589 aa12.91□□□□□ -0.34
MCF2L-213ENST00000421756 JPH3Q8WXH2 748 aaPredicted RBP12.91□□□□□ -0.34
MCF2L-213ENST00000421756 PDLIM5Q96HC4 596 aaKnown RBP12.91□□□□□ -0.34
MCF2L-213ENST00000421756 TPT1P8Q9HAU6 139 aa12.91□□□□□ -0.34
MCF2L-213ENST00000421756 SERHLQ9NQF3 203 aa12.91□□□□□ -0.34
MCF2L-213ENST00000421756 SPHK2Q9NRA0 654 aa12.91□□□□□ -0.34
MCF2L-213ENST00000421756 MRPS23Q9Y3D9 190 aaKnown RBP12.91□□□□□ -0.34
MCF2L-213ENST00000421756 GMPPBQ9Y5P6 360 aa12.91□□□□□ -0.34
MCF2L-213ENST00000421756 DOCK9Q9BZ29 2069 aa12.91□□□□□ -0.34
MCF2L-213ENST00000421756 PCDH7O60245 1069 aa12.91□□□□□ -0.34
MCF2L-213ENST00000421756 SOCS5O75159 536 aa12.91□□□□□ -0.34
MCF2L-213ENST00000421756 BCL10O95999 233 aa12.91□□□□□ -0.34
MCF2L-213ENST00000421756 CLTBP09497 229 aa12.91□□□□□ -0.34
MCF2L-213ENST00000421756 PRIM2P49643 509 aa12.91□□□□□ -0.34
MCF2L-213ENST00000421756 ARHGDIAP52565 204 aa12.91□□□□□ -0.34
MCF2L-213ENST00000421756 RAD23AP54725 363 aa12.91□□□□□ -0.34
MCF2L-213ENST00000421756 ST8SIA6P61647 398 aa12.91□□□□□ -0.34
MCF2L-213ENST00000421756 MTA1Q13330 715 aa12.91□□□□□ -0.34
MCF2L-213ENST00000421756 TMEM236Q5W0B7 351 aa12.91□□□□□ -0.34
MCF2L-213ENST00000421756 DUS1LQ6P1R4 473 aaKnown RBP12.91□□□□□ -0.34
MCF2L-213ENST00000421756 BTLAQ7Z6A9 289 aa12.91□□□□□ -0.34
MCF2L-213ENST00000421756 OR4A15Q8NGL6 344 aa12.91□□□□□ -0.34
MCF2L-213ENST00000421756 DOK4Q8TEW6 326 aa12.91□□□□□ -0.34
MCF2L-213ENST00000421756 RPL3LQ92901 407 aaKnown RBP12.91□□□□□ -0.34
MCF2L-213ENST00000421756 PYURFQ96I23 114 aa12.91□□□□□ -0.34
MCF2L-213ENST00000421756 PKP4Q99569 1192 aa12.91□□□□□ -0.34
MCF2L-213ENST00000421756 MIR1-1HGQ9H1L0 117 aa12.91□□□□□ -0.34
MCF2L-213ENST00000421756 ASF1AQ9Y294 204 aa12.91□□□□□ -0.34
MCF2L-213ENST00000421756 FAM227AF5H4B4 570 aa12.9□□□□□ -0.34
MCF2L-213ENST00000421756 KLK1P06870 262 aa12.9□□□□□ -0.34
MCF2L-213ENST00000421756 SPTBP11277 2137 aa12.9□□□□□ -0.34
MCF2L-213ENST00000421756 AMD1P17707 334 aa12.9□□□□□ -0.34
MCF2L-213ENST00000421756 CCNA2P20248 432 aa12.9□□□□□ -0.34
MCF2L-213ENST00000421756 GPR1P46091 355 aa12.9□□□□□ -0.34
MCF2L-213ENST00000421756 RPL26P61254 145 aaKnown RBP12.9□□□□□ -0.34
MCF2L-213ENST00000421756 ADARB1P78563 741 aaKnown RBP12.9□□□□□ -0.34
MCF2L-213ENST00000421756 COX20Q5RI15 118 aa12.9□□□□□ -0.34
MCF2L-213ENST00000421756 C6orf141Q5SZD1 244 aa12.9□□□□□ -0.34
MCF2L-213ENST00000421756 CPTPQ5TA50 214 aa12.9□□□□□ -0.34
MCF2L-213ENST00000421756 KLHL17Q6TDP4 642 aa12.9□□□□□ -0.34
MCF2L-213ENST00000421756 ADIPOR2Q86V24 386 aa12.9□□□□□ -0.34
MCF2L-213ENST00000421756 TMC8Q8IU68 726 aa12.9□□□□□ -0.34
MCF2L-213ENST00000421756 GTPBP3Q969Y2 492 aaKnown RBP12.9□□□□□ -0.34
MCF2L-213ENST00000421756 LRRC3BQ96PB8 259 aa12.9□□□□□ -0.34
MCF2L-213ENST00000421756 OR4K3Q96R72 315 aa12.9□□□□□ -0.34
MCF2L-213ENST00000421756 DUSP26Q9BV47 211 aa12.9□□□□□ -0.34
MCF2L-213ENST00000421756 NTMT1Q9BV86 223 aa12.9□□□□□ -0.34
MCF2L-213ENST00000421756 SLC12A9Q9BXP2 914 aa12.9□□□□□ -0.34
MCF2L-213ENST00000421756 SPNS1Q9H2V7 528 aa12.9□□□□□ -0.34
MCF2L-213ENST00000421756 IGFLR1Q9H665 355 aa12.9□□□□□ -0.34
MCF2L-213ENST00000421756 ST14Q9Y5Y6 855 aa12.9□□□□□ -0.34
MCF2L-213ENST00000421756 TRBV23OR9-2A0A075B6M9 112 aa12.9□□□□□ -0.34
MCF2L-213ENST00000421756 GABRR3A8MPY1 467 aa12.9□□□□□ -0.34
MCF2L-213ENST00000421756 BOLA2-SMG1P6H3BVE0 249 aa12.9□□□□□ -0.34
MCF2L-213ENST00000421756 J3KTA2 159 aa12.9□□□□□ -0.34
MCF2L-213ENST00000421756 MYO1DO94832 1006 aa12.9□□□□□ -0.34
MCF2L-213ENST00000421756 TIMP2P16035 220 aa12.9□□□□□ -0.34
MCF2L-213ENST00000421756 PLA2G16P53816 162 aa12.9□□□□□ -0.34
MCF2L-213ENST00000421756 CLDN8P56748 225 aa12.9□□□□□ -0.34
MCF2L-213ENST00000421756 POLR2LP62875 67 aaKnown RBP12.9□□□□□ -0.34
MCF2L-213ENST00000421756 OR8J3Q8NGG0 315 aa12.9□□□□□ -0.34
MCF2L-213ENST00000421756 GANCQ8TET4 914 aa12.9□□□□□ -0.34
MCF2L-213ENST00000421756 NELL1Q92832 810 aa12.9□□□□□ -0.34
MCF2L-213ENST00000421756 MBOAT4Q96T53 435 aa12.9□□□□□ -0.34
MCF2L-213ENST00000421756 SH3GL1Q99961 368 aa12.9□□□□□ -0.34
MCF2L-213ENST00000421756 DCAF13Q9NV06 445 aaKnown RBP12.9□□□□□ -0.34
MCF2L-213ENST00000421756 RAB23Q9ULC3 237 aa12.9□□□□□ -0.34
MCF2L-213ENST00000421756 ERVW-1Q9UQF0 538 aa12.9□□□□□ -0.34
MCF2L-213ENST00000421756 CACNA1IQ9P0X4 2223 aa12.9□□□□□ -0.34
MCF2L-213ENST00000421756 MICAL3Q7RTP6 2002 aa12.9□□□□□ -0.34
MCF2L-213ENST00000421756 COL4A6Q14031 1691 aa12.9□□□□□ -0.34
MCF2L-213ENST00000421756 THSD7BQ9C0I4 1608 aa12.9□□□□□ -0.34
MCF2L-213ENST00000421756 GLOD5A6NK44 160 aa12.9□□□□□ -0.34
MCF2L-213ENST00000421756 ARNTLO00327 626 aa12.9□□□□□ -0.34
MCF2L-213ENST00000421756 BMP10O95393 424 aa12.9□□□□□ -0.34
MCF2L-213ENST00000421756 C6orf47O95873 294 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms