RNA–Protein interactions for RNA: ENST00000421085.6

CLCN4-203, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 6,534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-203ENST00000421085 VMACQ2NL98 169 aa12.04□□□□□ -0.48
CLCN4-203ENST00000421085 ATXN7L2Q5T6C5 722 aaPredicted RBP12.04□□□□□ -0.48
CLCN4-203ENST00000421085 C15orf40Q8WUR7 153 aa12.04□□□□□ -0.48
CLCN4-203ENST00000421085 TRUB1Q8WWH5 349 aaKnown RBP12.04□□□□□ -0.48
CLCN4-203ENST00000421085 RIPOR3Q96MK2 946 aa12.04□□□□□ -0.48
CLCN4-203ENST00000421085 SLC39A1Q9NY26 324 aa12.04□□□□□ -0.48
CLCN4-203ENST00000421085 GTF2IRD1Q9UHL9 959 aa12.04□□□□□ -0.48
CLCN4-203ENST00000421085 SMIM35A0A1B0GVV1 85 aa12.04□□□□□ -0.48
CLCN4-203ENST00000421085 IRF6O14896 467 aa12.04□□□□□ -0.48
CLCN4-203ENST00000421085 MATN1P21941 496 aa12.04□□□□□ -0.48
CLCN4-203ENST00000421085 IDSP22304 550 aa12.04□□□□□ -0.48
CLCN4-203ENST00000421085 VAMP2P63027 116 aa12.04□□□□□ -0.48
CLCN4-203ENST00000421085 SEMA3AQ14563 771 aa12.04□□□□□ -0.48
CLCN4-203ENST00000421085 SLC8B1Q6J4K2 584 aa12.04□□□□□ -0.48
CLCN4-203ENST00000421085 ALPK1Q96QP1 1244 aa12.04□□□□□ -0.48
CLCN4-203ENST00000421085 ASPNQ9BXN1 380 aa12.04□□□□□ -0.48
CLCN4-203ENST00000421085 C14orf105Q9NVL8 296 aa12.04□□□□□ -0.48
CLCN4-203ENST00000421085 TAS2R9Q9NYW1 312 aa12.04□□□□□ -0.48
CLCN4-203ENST00000421085 TAS2R3Q9NYW6 316 aa12.04□□□□□ -0.48
CLCN4-203ENST00000421085 GIMAP2Q9UG22 337 aa12.04□□□□□ -0.48
CLCN4-203ENST00000421085 GPN3Q9UHW5 284 aaPredicted RBP12.04□□□□□ -0.48
CLCN4-203ENST00000421085 EDARQ9UNE0 448 aa12.04□□□□□ -0.48
CLCN4-203ENST00000421085 BCL9O00512 1426 aa12.04□□□□□ -0.48
CLCN4-203ENST00000421085 A0A1B0GVM2 712 aa12.04□□□□□ -0.48
CLCN4-203ENST00000421085 RENP00797 406 aa12.04□□□□□ -0.48
CLCN4-203ENST00000421085 FGF3P11487 239 aaPredicted RBP12.04□□□□□ -0.48
CLCN4-203ENST00000421085 MAGEA8P43361 318 aa12.04□□□□□ -0.48
CLCN4-203ENST00000421085 ADGRG6Q86SQ4 1221 aa12.04□□□□□ -0.48
CLCN4-203ENST00000421085 ANKRD13BQ86YJ7 626 aa12.04□□□□□ -0.48
CLCN4-203ENST00000421085 GPR22Q99680 433 aa12.04□□□□□ -0.48
CLCN4-203ENST00000421085 TTPALQ9BTX7 342 aa12.04□□□□□ -0.48
CLCN4-203ENST00000421085 ZNF700Q9H0M5 742 aa12.04□□□□□ -0.48
CLCN4-203ENST00000421085 ADAMTS10Q9H324 1103 aa12.04□□□□□ -0.48
CLCN4-203ENST00000421085 ZNF696Q9H7X3 374 aa12.04□□□□□ -0.48
CLCN4-203ENST00000421085 PHPT1Q9NRX4 125 aaPredicted RBP12.04□□□□□ -0.48
CLCN4-203ENST00000421085 P2RX2Q9UBL9 471 aa12.04□□□□□ -0.48
CLCN4-203ENST00000421085 TBC1D3DA0A087WVF3 549 aa12.03□□□□□ -0.48
CLCN4-203ENST00000421085 TBC1D3IA0A087WXS9 549 aa12.03□□□□□ -0.48
CLCN4-203ENST00000421085 TBC1D3EA0A087X179 549 aa12.03□□□□□ -0.48
CLCN4-203ENST00000421085 TBC1D3KA0A087X1G2 549 aa12.03□□□□□ -0.48
CLCN4-203ENST00000421085 TBC1D3FA6NER0 549 aaPredicted RBP12.03□□□□□ -0.48
CLCN4-203ENST00000421085 TBC1D3LB9A6J9 549 aa12.03□□□□□ -0.48
CLCN4-203ENST00000421085 GRIN3BO60391 1043 aa12.03□□□□□ -0.48
CLCN4-203ENST00000421085 OR2B3O76000 313 aa12.03□□□□□ -0.48
CLCN4-203ENST00000421085 RASAL1O95294 804 aa12.03□□□□□ -0.48
CLCN4-203ENST00000421085 RAB36O95755 333 aa12.03□□□□□ -0.48
CLCN4-203ENST00000421085 TGFB1P01137 390 aa12.03□□□□□ -0.48
CLCN4-203ENST00000421085 TBC1D3HP0C7X1 549 aa12.03□□□□□ -0.48
CLCN4-203ENST00000421085 HTR2BP41595 481 aa12.03□□□□□ -0.48
CLCN4-203ENST00000421085 AP1S1P61966 158 aa12.03□□□□□ -0.48
CLCN4-203ENST00000421085 OLIG2Q13516 323 aa12.03□□□□□ -0.48
CLCN4-203ENST00000421085 RHEBQ15382 184 aa12.03□□□□□ -0.48
CLCN4-203ENST00000421085 ATP6AP1Q15904 470 aa12.03□□□□□ -0.48
CLCN4-203ENST00000421085 SPATS1Q496A3 300 aa12.03□□□□□ -0.48
CLCN4-203ENST00000421085 TBC1D3GQ6DHY5 549 aa12.03□□□□□ -0.48
CLCN4-203ENST00000421085 TBC1D3CQ6IPX1 549 aa12.03□□□□□ -0.48
CLCN4-203ENST00000421085 LRRN1Q6UXK5 716 aa12.03□□□□□ -0.48
CLCN4-203ENST00000421085 IGDCC3Q8IVU1 814 aa12.03□□□□□ -0.48
CLCN4-203ENST00000421085 TBC1D3Q8IZP1 549 aaPredicted RBP12.03□□□□□ -0.48
CLCN4-203ENST00000421085 GATAD2BQ8WXI9 593 aa12.03□□□□□ -0.48
CLCN4-203ENST00000421085 BCAS3Q9H6U6 928 aa12.03□□□□□ -0.48
CLCN4-203ENST00000421085 FBXO9Q9UK97 447 aaPredicted RBP12.03□□□□□ -0.48
CLCN4-203ENST00000421085 MAFBQ9Y5Q3 323 aaPredicted RBP12.03□□□□□ -0.48
CLCN4-203ENST00000421085 A0A0J9YVX5 310 aa12.03□□□□□ -0.48
CLCN4-203ENST00000421085 MYBPHLA2RUH7 354 aa12.03□□□□□ -0.48
CLCN4-203ENST00000421085 RNASEH2AO75792 299 aaKnown RBP12.03□□□□□ -0.48
CLCN4-203ENST00000421085 SOWAHAQ2M3V2 549 aa12.03□□□□□ -0.48
CLCN4-203ENST00000421085 OR4F6Q8NGB9 312 aa12.03□□□□□ -0.48
CLCN4-203ENST00000421085 GPR151Q8TDV0 419 aa12.03□□□□□ -0.48
CLCN4-203ENST00000421085 GRHL3Q8TE85 626 aa12.03□□□□□ -0.48
CLCN4-203ENST00000421085 MAFIPQ8WZ33 124 aa12.03□□□□□ -0.48
CLCN4-203ENST00000421085 ZCCHC3Q9NUD5 404 aaKnown RBP12.03□□□□□ -0.48
CLCN4-203ENST00000421085 SPATA31A6Q5VVP1 1343 aa12.03□□□□□ -0.48
CLCN4-203ENST00000421085 ARL6IP5O75915 188 aa12.03□□□□□ -0.48
CLCN4-203ENST00000421085 SLC35G6P0C7Q6 338 aa12.03□□□□□ -0.48
CLCN4-203ENST00000421085 CREMQ03060 361 aa12.03□□□□□ -0.48
CLCN4-203ENST00000421085 PPP1R3AQ16821 1122 aa12.03□□□□□ -0.48
CLCN4-203ENST00000421085 DGLUCYQ7Z3D6 616 aa12.03□□□□□ -0.48
CLCN4-203ENST00000421085 SYNPOQ8N3V7 929 aa12.03□□□□□ -0.48
CLCN4-203ENST00000421085 FAM46DQ8NEK8 389 aa12.03□□□□□ -0.48
CLCN4-203ENST00000421085 C7orf43Q8WVR3 580 aa12.03□□□□□ -0.48
CLCN4-203ENST00000421085 NXPE2Q96DL1 559 aa12.03□□□□□ -0.48
CLCN4-203ENST00000421085 FAXDC2Q96IV6 333 aa12.03□□□□□ -0.48
CLCN4-203ENST00000421085 MKKSQ9NPJ1 570 aaPredicted RBP12.03□□□□□ -0.48
CLCN4-203ENST00000421085 SIRPGQ9P1W8 387 aa12.03□□□□□ -0.48
CLCN4-203ENST00000421085 ERVK-18Q9QC07 812 aa12.03□□□□□ -0.48
CLCN4-203ENST00000421085 CDH7Q9ULB5 785 aa12.03□□□□□ -0.48
CLCN4-203ENST00000421085 COLEC10Q9Y6Z7 277 aa12.03□□□□□ -0.48
CLCN4-203ENST00000421085 RBM47A0AV96 593 aaKnown RBP12.03□□□□□ -0.48
CLCN4-203ENST00000421085 C9IYK1 514 aa12.03□□□□□ -0.48
CLCN4-203ENST00000421085 GJA9P57773 515 aa12.03□□□□□ -0.48
CLCN4-203ENST00000421085 LILRA4P59901 499 aa12.03□□□□□ -0.48
CLCN4-203ENST00000421085 PHC3Q8NDX5 983 aa12.03□□□□□ -0.48
CLCN4-203ENST00000421085 CD300LFQ8TDQ1 290 aa12.03□□□□□ -0.48
CLCN4-203ENST00000421085 SNX27Q96L92 541 aa12.03□□□□□ -0.48
CLCN4-203ENST00000421085 RANBP3Q9H6Z4 567 aaPredicted RBP12.03□□□□□ -0.48
CLCN4-203ENST00000421085 FBRSL1Q9HCM7 1045 aaKnown RBP12.03□□□□□ -0.48
CLCN4-203ENST00000421085 MAFFQ9ULX9 164 aa12.03□□□□□ -0.48
CLCN4-203ENST00000421085 CDC7O00311 574 aa12.03□□□□□ -0.48
CLCN4-203ENST00000421085 IFNA21P01568 189 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms