RNA–Protein interactions for RNA: ENST00000420996.2

UPF3AP3-201, Transcript of UPF3A pseudogene 3, humanhuman

BASIC

Gene UPF3AP3, Length 769 nt, Biotype transcribed processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP3-201ENST00000420996 SUSD1Q6UWL2 747 aa16■□□□□ 0.15
UPF3AP3-201ENST00000420996 PRUNE1Q86TP1 453 aa16■□□□□ 0.15
UPF3AP3-201ENST00000420996 ARHGEF39Q8N4T4 335 aa16■□□□□ 0.15
UPF3AP3-201ENST00000420996 IMMP1LQ96LU5 166 aa16■□□□□ 0.15
UPF3AP3-201ENST00000420996 BIRC8Q96P09 236 aa16■□□□□ 0.15
UPF3AP3-201ENST00000420996 OR2A5Q96R48 311 aa16■□□□□ 0.15
UPF3AP3-201ENST00000420996 TUBB6Q9BUF5 446 aa16■□□□□ 0.15
UPF3AP3-201ENST00000420996 SYNPO2LQ9H987 977 aa16■□□□□ 0.15
UPF3AP3-201ENST00000420996 UTP6Q9NYH9 597 aaKnown RBP16■□□□□ 0.15
UPF3AP3-201ENST00000420996 STMN3Q9NZ72 180 aa16■□□□□ 0.15
UPF3AP3-201ENST00000420996 SCN2AQ99250 2005 aa16■□□□□ 0.15
UPF3AP3-201ENST00000420996 OTOGQ6ZRI0 2925 aa16■□□□□ 0.15
UPF3AP3-201ENST00000420996 CSMD1Q96PZ7 3565 aa15.99■□□□□ 0.15
UPF3AP3-201ENST00000420996 IGKV1-8A0A0C4DH67 115 aa15.99■□□□□ 0.15
UPF3AP3-201ENST00000420996 OR5H15A6NDH6 313 aa15.99■□□□□ 0.15
UPF3AP3-201ENST00000420996 MYO1CO00159 1063 aa15.99■□□□□ 0.15
UPF3AP3-201ENST00000420996 TXNDC9O14530 226 aa15.99■□□□□ 0.15
UPF3AP3-201ENST00000420996 FOXS1O43638 330 aa15.99■□□□□ 0.15
UPF3AP3-201ENST00000420996 PRAMEF2O60811 474 aa15.99■□□□□ 0.15
UPF3AP3-201ENST00000420996 NMBRP28336 390 aa15.99■□□□□ 0.15
UPF3AP3-201ENST00000420996 NPY2RP49146 381 aa15.99■□□□□ 0.15
UPF3AP3-201ENST00000420996 CRADDP78560 199 aa15.99■□□□□ 0.15
UPF3AP3-201ENST00000420996 RBPJQ06330 500 aa15.99■□□□□ 0.15
UPF3AP3-201ENST00000420996 PRDX1Q06830 199 aaKnown RBP15.99■□□□□ 0.15
UPF3AP3-201ENST00000420996 KIF5AQ12840 1032 aa15.99■□□□□ 0.15
UPF3AP3-201ENST00000420996 ARHGAP19Q14CB8 494 aa15.99■□□□□ 0.15
UPF3AP3-201ENST00000420996 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.99■□□□□ 0.15
UPF3AP3-201ENST00000420996 ZNF425Q6IV72 752 aa15.99■□□□□ 0.15
UPF3AP3-201ENST00000420996 XKRXQ6PP77 449 aa15.99■□□□□ 0.15
UPF3AP3-201ENST00000420996 CCDC89Q8N998 374 aa15.99■□□□□ 0.15
UPF3AP3-201ENST00000420996 C1orf54Q8WWF1 131 aa15.99■□□□□ 0.15
UPF3AP3-201ENST00000420996 RERGQ96A58 199 aaPredicted RBP15.99■□□□□ 0.15
UPF3AP3-201ENST00000420996 IL22Q9GZX6 179 aa15.99■□□□□ 0.15
UPF3AP3-201ENST00000420996 DRC3Q9H069 523 aa15.99■□□□□ 0.15
UPF3AP3-201ENST00000420996 TEKT2Q9UIF3 430 aa15.99■□□□□ 0.15
UPF3AP3-201ENST00000420996 TSR3Q9UJK0 312 aaKnown RBP15.99■□□□□ 0.15
UPF3AP3-201ENST00000420996 MKL2Q9ULH7 1088 aa15.99■□□□□ 0.15
UPF3AP3-201ENST00000420996 PDZD2O15018 2839 aa15.99■□□□□ 0.15
UPF3AP3-201ENST00000420996 A0A0A6YYC8 382 aaPredicted RBP15.98■□□□□ 0.15
UPF3AP3-201ENST00000420996 A0A0U1RQJ8 604 aa15.98■□□□□ 0.15
UPF3AP3-201ENST00000420996 ARHGEF33A8MVX0 844 aa15.98■□□□□ 0.15
UPF3AP3-201ENST00000420996 H3BMM5 538 aa15.98■□□□□ 0.15
UPF3AP3-201ENST00000420996 I3L1I5 382 aaPredicted RBP15.98■□□□□ 0.15
UPF3AP3-201ENST00000420996 AP3B1O00203 1094 aa15.98■□□□□ 0.15
UPF3AP3-201ENST00000420996 NIPSNAP2O75323 286 aa15.98■□□□□ 0.15
UPF3AP3-201ENST00000420996 PSIP1O75475 530 aaKnown RBP15.98■□□□□ 0.15
UPF3AP3-201ENST00000420996 CCNDBP1O95273 360 aa15.98■□□□□ 0.15
UPF3AP3-201ENST00000420996 EZRP15311 586 aaKnown RBP15.98■□□□□ 0.15
UPF3AP3-201ENST00000420996 FMO4P31512 558 aa15.98■□□□□ 0.15
UPF3AP3-201ENST00000420996 HSD17B2P37059 387 aa15.98■□□□□ 0.15
UPF3AP3-201ENST00000420996 CASP6P55212 293 aa15.98■□□□□ 0.15
UPF3AP3-201ENST00000420996 RIPPLY3P57055 190 aa15.98■□□□□ 0.15
UPF3AP3-201ENST00000420996 SNX1Q13596 522 aa15.98■□□□□ 0.15
UPF3AP3-201ENST00000420996 FAM53BQ14153 422 aa15.98■□□□□ 0.15
UPF3AP3-201ENST00000420996 LONRF1Q17RB8 773 aa15.98■□□□□ 0.15
UPF3AP3-201ENST00000420996 ICE2Q659A1 982 aa15.98■□□□□ 0.15
UPF3AP3-201ENST00000420996 MRNIPQ6NTE8 343 aa15.98■□□□□ 0.15
UPF3AP3-201ENST00000420996 SDCCAG8Q86SQ7 713 aaPredicted RBP15.98■□□□□ 0.15
UPF3AP3-201ENST00000420996 SLC13A5Q86YT5 568 aaPredicted RBP15.98■□□□□ 0.15
UPF3AP3-201ENST00000420996 ZC3H7AQ8IWR0 971 aaKnown RBP15.98■□□□□ 0.15
UPF3AP3-201ENST00000420996 TXLNBQ8N3L3 684 aa15.98■□□□□ 0.15
UPF3AP3-201ENST00000420996 OTUD6BQ8N6M0 293 aa15.98■□□□□ 0.15
UPF3AP3-201ENST00000420996 METTL21AQ8WXB1 218 aa15.98■□□□□ 0.15
UPF3AP3-201ENST00000420996 LPGAT1Q92604 370 aa15.98■□□□□ 0.15
UPF3AP3-201ENST00000420996 TCF12Q99081 682 aa15.98■□□□□ 0.15
UPF3AP3-201ENST00000420996 EIF2B3Q9NR50 452 aaKnown RBP15.98■□□□□ 0.15
UPF3AP3-201ENST00000420996 FAM114A2Q9NRY5 505 aa15.98■□□□□ 0.15
UPF3AP3-201ENST00000420996 BFARQ9NZS9 450 aa15.98■□□□□ 0.15
UPF3AP3-201ENST00000420996 ZNF839A8K0R7 811 aa15.97■□□□□ 0.15
UPF3AP3-201ENST00000420996 PFDN6O15212 129 aa15.97■□□□□ 0.15
UPF3AP3-201ENST00000420996 VAPBO95292 243 aa15.97■□□□□ 0.15
UPF3AP3-201ENST00000420996 ESR1P03372 595 aa15.97■□□□□ 0.15
UPF3AP3-201ENST00000420996 ZSCAN5DPP0CG00 497 aa15.97■□□□□ 0.15
UPF3AP3-201ENST00000420996 C8orf89P0DMQ9 161 aa15.97■□□□□ 0.15
UPF3AP3-201ENST00000420996 COX6B1P14854 86 aa15.97■□□□□ 0.15
UPF3AP3-201ENST00000420996 CHRM3P20309 590 aa15.97■□□□□ 0.15
UPF3AP3-201ENST00000420996 ARNTP27540 789 aa15.97■□□□□ 0.15
UPF3AP3-201ENST00000420996 RPL22P35268 128 aaKnown RBP15.97■□□□□ 0.15
UPF3AP3-201ENST00000420996 EFNA3P52797 238 aa15.97■□□□□ 0.15
UPF3AP3-201ENST00000420996 PNLIPRP1P54315 467 aa15.97■□□□□ 0.15
UPF3AP3-201ENST00000420996 ADARP55265 1226 aaKnown RBP15.97■□□□□ 0.15
UPF3AP3-201ENST00000420996 SRSF11Q05519 484 aaKnown RBP15.97■□□□□ 0.15
UPF3AP3-201ENST00000420996 ZNF33BQ06732 778 aa15.97■□□□□ 0.15
UPF3AP3-201ENST00000420996 TSTA3Q13630 321 aaPredicted RBP15.97■□□□□ 0.15
UPF3AP3-201ENST00000420996 SYT16Q17RD7 645 aa15.97■□□□□ 0.15
UPF3AP3-201ENST00000420996 TYSND1Q2T9J0 566 aa15.97■□□□□ 0.15
UPF3AP3-201ENST00000420996 RNF187Q5TA31 235 aaPredicted RBP15.97■□□□□ 0.15
UPF3AP3-201ENST00000420996 SEL1L2Q5TEA6 688 aa15.97■□□□□ 0.15
UPF3AP3-201ENST00000420996 LURAP1Q96LR2 239 aa15.97■□□□□ 0.15
UPF3AP3-201ENST00000420996 PKP4Q99569 1192 aa15.97■□□□□ 0.15
UPF3AP3-201ENST00000420996 TAC3Q9UHF0 121 aa15.97■□□□□ 0.15
UPF3AP3-201ENST00000420996 PCYOX1Q9UHG3 505 aa15.97■□□□□ 0.15
UPF3AP3-201ENST00000420996 SH3BGRL2Q9UJC5 107 aa15.97■□□□□ 0.15
UPF3AP3-201ENST00000420996 DRG1Q9Y295 367 aaKnown RBP15.97■□□□□ 0.15
UPF3AP3-201ENST00000420996 PCDHGB6Q9Y5F9 930 aa15.97■□□□□ 0.15
UPF3AP3-201ENST00000420996 FBN2P35556 2912 aa15.97■□□□□ 0.15
UPF3AP3-201ENST00000420996 PKDREJQ9NTG1 2253 aa15.97■□□□□ 0.15
UPF3AP3-201ENST00000420996 NCOA6Q14686 2063 aaPredicted RBP15.96■□□□□ 0.15
UPF3AP3-201ENST00000420996 SLC19A2O60779 497 aa15.96■□□□□ 0.15
UPF3AP3-201ENST00000420996 CATP04040 527 aaKnown RBP15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms