RNA–Protein interactions for RNA: ENST00000420101.6

SEMA4D-204, Transcript of semaphorin 4D, humanhuman

TSL 1 (best) BASIC

Gene SEMA4D, Length 1,837 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-204ENST00000420101 FDXRP22570 491 aa14.36□□□□□ -0.11
SEMA4D-204ENST00000420101 GJA4P35212 333 aa14.36□□□□□ -0.11
SEMA4D-204ENST00000420101 COPZ1P61923 177 aa14.36□□□□□ -0.11
SEMA4D-204ENST00000420101 PLA2G4EQ3MJ16 856 aa14.36□□□□□ -0.11
SEMA4D-204ENST00000420101 ZIK1Q3SY52 487 aaPredicted RBP14.36□□□□□ -0.11
SEMA4D-204ENST00000420101 FAM209AQ5JX71 171 aa14.36□□□□□ -0.11
SEMA4D-204ENST00000420101 SIGIRRQ6IA17 410 aa14.36□□□□□ -0.11
SEMA4D-204ENST00000420101 CERS6Q6ZMG9 384 aa14.36□□□□□ -0.11
SEMA4D-204ENST00000420101 NUDT18Q6ZVK8 323 aa14.36□□□□□ -0.11
SEMA4D-204ENST00000420101 SPNS2Q8IVW8 549 aa14.36□□□□□ -0.11
SEMA4D-204ENST00000420101 ADHFE1Q8IWW8 467 aa14.36□□□□□ -0.11
SEMA4D-204ENST00000420101 STK40Q8N2I9 435 aa14.36□□□□□ -0.11
SEMA4D-204ENST00000420101 GALNT6Q8NCL4 622 aa14.36□□□□□ -0.11
SEMA4D-204ENST00000420101 PSMA8Q8TAA3 256 aa14.36□□□□□ -0.11
SEMA4D-204ENST00000420101 IPCEF1Q8WWN9 437 aaPredicted RBP14.36□□□□□ -0.11
SEMA4D-204ENST00000420101 FGF14Q92915 247 aa14.36□□□□□ -0.11
SEMA4D-204ENST00000420101 ERLEC1Q96DZ1 483 aa14.36□□□□□ -0.11
SEMA4D-204ENST00000420101 BRINP2Q9C0B6 783 aa14.36□□□□□ -0.11
SEMA4D-204ENST00000420101 SARS2Q9NP81 518 aaKnown RBP14.36□□□□□ -0.11
SEMA4D-204ENST00000420101 CHD7Q9P2D1 2997 aa14.36□□□□□ -0.11
SEMA4D-204ENST00000420101 PMF1-BGLAPU3KQ54 211 aa14.36□□□□□ -0.11
SEMA4D-204ENST00000420101 HAT1O14929 419 aa14.35□□□□□ -0.11
SEMA4D-204ENST00000420101 PRR35P0CG20 571 aa14.35□□□□□ -0.11
SEMA4D-204ENST00000420101 PKMP14618 531 aaKnown RBP14.35□□□□□ -0.11
SEMA4D-204ENST00000420101 IL7RP16871 459 aa14.35□□□□□ -0.11
SEMA4D-204ENST00000420101 HRH2P25021 359 aa14.35□□□□□ -0.11
SEMA4D-204ENST00000420101 PTGER3P43115 390 aa14.35□□□□□ -0.11
SEMA4D-204ENST00000420101 BNC1Q01954 994 aa14.35□□□□□ -0.11
SEMA4D-204ENST00000420101 CAPRIN1Q14444 709 aaKnown RBP14.35□□□□□ -0.11
SEMA4D-204ENST00000420101 CDK10Q15131 360 aa14.35□□□□□ -0.11
SEMA4D-204ENST00000420101 CHRNA6Q15825 494 aa14.35□□□□□ -0.11
SEMA4D-204ENST00000420101 CDKN3Q16667 212 aa14.35□□□□□ -0.11
SEMA4D-204ENST00000420101 MEP1AQ16819 746 aa14.35□□□□□ -0.11
SEMA4D-204ENST00000420101 GAB4Q2WGN9 574 aa14.35□□□□□ -0.11
SEMA4D-204ENST00000420101 ZNF805Q5CZA5 627 aa14.35□□□□□ -0.11
SEMA4D-204ENST00000420101 PTRHD1Q6GMV3 140 aaKnown RBP14.35□□□□□ -0.11
SEMA4D-204ENST00000420101 SULT1C3Q6IMI6 304 aa14.35□□□□□ -0.11
SEMA4D-204ENST00000420101 PAGE2Q7Z2X7 111 aa14.35□□□□□ -0.11
SEMA4D-204ENST00000420101 SNX20Q7Z614 316 aa14.35□□□□□ -0.11
SEMA4D-204ENST00000420101 SERPINA9Q86WD7 417 aa14.35□□□□□ -0.11
SEMA4D-204ENST00000420101 OR5K1Q8NHB7 308 aa14.35□□□□□ -0.11
SEMA4D-204ENST00000420101 TWIST2Q8WVJ9 160 aa14.35□□□□□ -0.11
SEMA4D-204ENST00000420101 OR8D1Q8WZ84 308 aa14.35□□□□□ -0.11
SEMA4D-204ENST00000420101 TBC1D20Q96BZ9 403 aa14.35□□□□□ -0.11
SEMA4D-204ENST00000420101 LGALS12Q96DT0 336 aa14.35□□□□□ -0.11
SEMA4D-204ENST00000420101 LRCH3Q96II8 777 aa14.35□□□□□ -0.11
SEMA4D-204ENST00000420101 LYSMD1Q96S90 227 aa14.35□□□□□ -0.11
SEMA4D-204ENST00000420101 MBOAT4Q96T53 435 aa14.35□□□□□ -0.11
SEMA4D-204ENST00000420101 SEPHS2Q99611 448 aa14.35□□□□□ -0.11
SEMA4D-204ENST00000420101 BTBD2Q9BX70 525 aa14.35□□□□□ -0.11
SEMA4D-204ENST00000420101 NXF2Q9GZY0 626 aaKnown RBP14.35□□□□□ -0.11
SEMA4D-204ENST00000420101 MAGIXQ9H6Y5 334 aa14.35□□□□□ -0.11
SEMA4D-204ENST00000420101 IL26Q9NPH9 171 aa14.35□□□□□ -0.11
SEMA4D-204ENST00000420101 GMPR2Q9P2T1 348 aaKnown RBP14.35□□□□□ -0.11
SEMA4D-204ENST00000420101 PPIL1Q9Y3C6 166 aa14.35□□□□□ -0.11
SEMA4D-204ENST00000420101 DNAJC15Q9Y5T4 150 aa14.35□□□□□ -0.11
SEMA4D-204ENST00000420101 CEP290O15078 2479 aa14.35□□□□□ -0.11
SEMA4D-204ENST00000420101 EDDM13A0A1B0GTR0 161 aa14.34□□□□□ -0.11
SEMA4D-204ENST00000420101 FAM234BA2RU67 622 aa14.34□□□□□ -0.11
SEMA4D-204ENST00000420101 PABPN1LA6NDY0 278 aaKnown RBP14.34□□□□□ -0.11
SEMA4D-204ENST00000420101 UPK3BL1B0FP48 263 aa14.34□□□□□ -0.11
SEMA4D-204ENST00000420101 UPK3BL2E5RIL1 263 aa14.34□□□□□ -0.11
SEMA4D-204ENST00000420101 UBFD1O14562 309 aaKnown RBP14.34□□□□□ -0.11
SEMA4D-204ENST00000420101 PRNPP04156 253 aa14.34□□□□□ -0.11
SEMA4D-204ENST00000420101 APODP05090 189 aa14.34□□□□□ -0.11
SEMA4D-204ENST00000420101 CTSLP07711 333 aa14.34□□□□□ -0.11
SEMA4D-204ENST00000420101 ZNF7P17097 686 aaPredicted RBP14.34□□□□□ -0.11
SEMA4D-204ENST00000420101 NR4A1P22736 598 aa14.34□□□□□ -0.11
SEMA4D-204ENST00000420101 OPRD1P41143 372 aa14.34□□□□□ -0.11
SEMA4D-204ENST00000420101 ETV6P41212 452 aa14.34□□□□□ -0.11
SEMA4D-204ENST00000420101 CLCQ05315 142 aa14.34□□□□□ -0.11
SEMA4D-204ENST00000420101 TRAF3Q13114 568 aa14.34□□□□□ -0.11
SEMA4D-204ENST00000420101 NFATC2Q13469 925 aa14.34□□□□□ -0.11
SEMA4D-204ENST00000420101 KEAP1Q14145 624 aa14.34□□□□□ -0.11
SEMA4D-204ENST00000420101 ZNF234Q14588 700 aa14.34□□□□□ -0.11
SEMA4D-204ENST00000420101 IMPG1Q17R60 797 aa14.34□□□□□ -0.11
SEMA4D-204ENST00000420101 ITPRIPL2Q3MIP1 535 aa14.34□□□□□ -0.11
SEMA4D-204ENST00000420101 UNC50Q53HI1 259 aa14.34□□□□□ -0.11
SEMA4D-204ENST00000420101 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.34□□□□□ -0.11
SEMA4D-204ENST00000420101 CCNJQ5T5M9 372 aa14.34□□□□□ -0.11
SEMA4D-204ENST00000420101 MTSS1LQ765P7 747 aa14.34□□□□□ -0.11
SEMA4D-204ENST00000420101 HORMAD1Q86X24 394 aa14.34□□□□□ -0.11
SEMA4D-204ENST00000420101 HIPK1Q86Z02 1210 aa14.34□□□□□ -0.11
SEMA4D-204ENST00000420101 SFTPA1Q8IWL2 248 aa14.34□□□□□ -0.11
SEMA4D-204ENST00000420101 EID3Q8N140 333 aa14.34□□□□□ -0.11
SEMA4D-204ENST00000420101 AMER2Q8N7J2 671 aa14.34□□□□□ -0.11
SEMA4D-204ENST00000420101 NDNFQ8TB73 568 aa14.34□□□□□ -0.11
SEMA4D-204ENST00000420101 SETD6Q8TBK2 473 aa14.34□□□□□ -0.11
SEMA4D-204ENST00000420101 ANKRD49Q8WVL7 239 aa14.34□□□□□ -0.11
SEMA4D-204ENST00000420101 SUSD6Q92537 303 aa14.34□□□□□ -0.11
SEMA4D-204ENST00000420101 LRIG1Q96JA1 1093 aa14.34□□□□□ -0.11
SEMA4D-204ENST00000420101 RPP25Q9BUL9 199 aaKnown RBP14.34□□□□□ -0.11
SEMA4D-204ENST00000420101 CLPBQ9H078 707 aa14.34□□□□□ -0.11
SEMA4D-204ENST00000420101 SYTL2Q9HCH5 934 aa14.34□□□□□ -0.11
SEMA4D-204ENST00000420101 FBRSL1Q9HCM7 1045 aaKnown RBP14.34□□□□□ -0.11
SEMA4D-204ENST00000420101 TNFRSF12AQ9NP84 129 aa14.34□□□□□ -0.11
SEMA4D-204ENST00000420101 AIG1Q9NVV5 245 aa14.34□□□□□ -0.11
SEMA4D-204ENST00000420101 TRMT6Q9UJA5 497 aaKnown RBP14.34□□□□□ -0.11
SEMA4D-204ENST00000420101 NEMP2A6NFY4 417 aa14.34□□□□□ -0.11
SEMA4D-204ENST00000420101 CENPXA8MT69 81 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms