RNA–Protein interactions for RNA: ENST00000418518.2

LINCMD1-201, Transcript of long intergenic non-protein coding RNA, muscle differentiation 1, humanhuman

TSL 5 BASIC

Gene LINCMD1, Length 462 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCMD1-201ENST00000418518 SGK2Q9HBY8 427 aa8.74□□□□□ -1.01
LINCMD1-201ENST00000418518 WASH6PQ9NQA3 447 aa8.74□□□□□ -1.01
LINCMD1-201ENST00000418518 C8orf4Q9NR00 106 aa8.74□□□□□ -1.01
LINCMD1-201ENST00000418518 GEMIN8Q9NWZ8 242 aaKnown RBP8.74□□□□□ -1.01
LINCMD1-201ENST00000418518 FAM120CQ9NX05 1096 aaKnown RBP8.74□□□□□ -1.01
LINCMD1-201ENST00000418518 FBXL12Q9NXK8 326 aa8.74□□□□□ -1.01
LINCMD1-201ENST00000418518 CLDND1Q9NY35 253 aa8.74□□□□□ -1.01
LINCMD1-201ENST00000418518 EGFL7Q9UHF1 273 aa8.74□□□□□ -1.01
LINCMD1-201ENST00000418518 MTCH2Q9Y6C9 303 aa8.74□□□□□ -1.01
LINCMD1-201ENST00000418518 CDH23Q9H251 3354 aa8.73□□□□□ -1.01
LINCMD1-201ENST00000418518 ARHGEF17Q96PE2 2063 aaPredicted RBP8.73□□□□□ -1.01
LINCMD1-201ENST00000418518 A0A1W2PQU0 124 aa8.73□□□□□ -1.01
LINCMD1-201ENST00000418518 PIPSLA2A3N6 862 aa8.73□□□□□ -1.01
LINCMD1-201ENST00000418518 MAGEA13PA6NCF6 341 aa8.73□□□□□ -1.01
LINCMD1-201ENST00000418518 A6NHS1 94 aa8.73□□□□□ -1.01
LINCMD1-201ENST00000418518 SCAMP2O15127 329 aaKnown RBP8.73□□□□□ -1.01
LINCMD1-201ENST00000418518 RNGTTO60942 597 aaKnown RBP8.73□□□□□ -1.01
LINCMD1-201ENST00000418518 ETHE1O95571 254 aa8.73□□□□□ -1.01
LINCMD1-201ENST00000418518 EGFP01133 1207 aa8.73□□□□□ -1.01
LINCMD1-201ENST00000418518 DNTTP04053 509 aa8.73□□□□□ -1.01
LINCMD1-201ENST00000418518 CDH1P12830 882 aa8.73□□□□□ -1.01
LINCMD1-201ENST00000418518 GLULP15104 373 aa8.73□□□□□ -1.01
LINCMD1-201ENST00000418518 IL1RNP18510 177 aa8.73□□□□□ -1.01
LINCMD1-201ENST00000418518 IL10P22301 178 aa8.73□□□□□ -1.01
LINCMD1-201ENST00000418518 OXTRP30559 389 aa8.73□□□□□ -1.01
LINCMD1-201ENST00000418518 SERPINB1P30740 379 aa8.73□□□□□ -1.01
LINCMD1-201ENST00000418518 KIR3DL1P43629 444 aa8.73□□□□□ -1.01
LINCMD1-201ENST00000418518 SEC13P55735 322 aa8.73□□□□□ -1.01
LINCMD1-201ENST00000418518 POLE2P56282 527 aa8.73□□□□□ -1.01
LINCMD1-201ENST00000418518 MTPNP58546 118 aa8.73□□□□□ -1.01
LINCMD1-201ENST00000418518 KIAA1024LP59773 190 aa8.73□□□□□ -1.01
LINCMD1-201ENST00000418518 SLBPQ14493 270 aaKnown RBP eCLIP8.73□□□□□ -1.01
LINCMD1-201ENST00000418518 LRRC36Q1X8D7 754 aa8.73□□□□□ -1.01
LINCMD1-201ENST00000418518 PLA2G4EQ3MJ16 856 aa8.73□□□□□ -1.01
LINCMD1-201ENST00000418518 HABP4Q5JVS0 413 aaKnown RBP8.73□□□□□ -1.01
LINCMD1-201ENST00000418518 INTS11Q5TA45 600 aaKnown RBP8.73□□□□□ -1.01
LINCMD1-201ENST00000418518 SDE2Q6IQ49 451 aa8.73□□□□□ -1.01
LINCMD1-201ENST00000418518 PPP4R4Q6NUP7 873 aa8.73□□□□□ -1.01
LINCMD1-201ENST00000418518 DOK6Q6PKX4 331 aa8.73□□□□□ -1.01
LINCMD1-201ENST00000418518 FKBP9P1Q75LS8 142 aa8.73□□□□□ -1.01
LINCMD1-201ENST00000418518 GPR180Q86V85 440 aa8.73□□□□□ -1.01
LINCMD1-201ENST00000418518 SPPL2CQ8IUH8 684 aa8.73□□□□□ -1.01
LINCMD1-201ENST00000418518 SYT12Q8IV01 421 aa8.73□□□□□ -1.01
LINCMD1-201ENST00000418518 APLFQ8IW19 511 aaPredicted RBP8.73□□□□□ -1.01
LINCMD1-201ENST00000418518 TBC1D21Q8IYX1 336 aa8.73□□□□□ -1.01
LINCMD1-201ENST00000418518 TMEM132CQ8N3T6 1108 aa8.73□□□□□ -1.01
LINCMD1-201ENST00000418518 RNF175Q8N4F7 328 aa8.73□□□□□ -1.01
LINCMD1-201ENST00000418518 ABHD11Q8NFV4 315 aa8.73□□□□□ -1.01
LINCMD1-201ENST00000418518 OR5AR1Q8NGP9 310 aa8.73□□□□□ -1.01
LINCMD1-201ENST00000418518 CLHC1Q8NHS4 586 aa8.73□□□□□ -1.01
LINCMD1-201ENST00000418518 MSANTD3Q96H12 275 aa8.73□□□□□ -1.01
LINCMD1-201ENST00000418518 ABHD8Q96I13 439 aa8.73□□□□□ -1.01
LINCMD1-201ENST00000418518 ZNF597Q96LX8 424 aa8.73□□□□□ -1.01
LINCMD1-201ENST00000418518 PHF12Q96QT6 1004 aa8.73□□□□□ -1.01
LINCMD1-201ENST00000418518 MTERF1Q99551 399 aaKnown RBP8.73□□□□□ -1.01
LINCMD1-201ENST00000418518 SLC17A9Q9BYT1 436 aa8.73□□□□□ -1.01
LINCMD1-201ENST00000418518 TRIM8Q9BZR9 551 aa8.73□□□□□ -1.01
LINCMD1-201ENST00000418518 RHBGQ9H310 441 aa8.73□□□□□ -1.01
LINCMD1-201ENST00000418518 VCXQ9H320 206 aa8.73□□□□□ -1.01
LINCMD1-201ENST00000418518 IKZF5Q9H5V7 419 aa8.73□□□□□ -1.01
LINCMD1-201ENST00000418518 KAT8Q9H7Z6 458 aaKnown RBP8.73□□□□□ -1.01
LINCMD1-201ENST00000418518 OLAHQ9NV23 265 aa8.73□□□□□ -1.01
LINCMD1-201ENST00000418518 ADGRE2Q9UHX3 823 aa8.73□□□□□ -1.01
LINCMD1-201ENST00000418518 ATP6V1HQ9UI12 483 aa8.73□□□□□ -1.01
LINCMD1-201ENST00000418518 ANAPC2Q9UJX6 822 aa8.73□□□□□ -1.01
LINCMD1-201ENST00000418518 ASF1AQ9Y294 204 aa8.73□□□□□ -1.01
LINCMD1-201ENST00000418518 REV3LO60673 3130 aa8.73□□□□□ -1.01
LINCMD1-201ENST00000418518 TMEM265A0A087WTH1 108 aa8.72□□□□□ -1.01
LINCMD1-201ENST00000418518 A0A1W2PPV9 198 aa8.72□□□□□ -1.01
LINCMD1-201ENST00000418518 TIPRLO75663 272 aa8.72□□□□□ -1.01
LINCMD1-201ENST00000418518 SMNDC1O75940 238 aaKnown RBP eCLIP8.72□□□□□ -1.01
LINCMD1-201ENST00000418518 MYO1DO94832 1006 aa8.72□□□□□ -1.01
LINCMD1-201ENST00000418518 SEMA3DO95025 777 aa8.72□□□□□ -1.01
LINCMD1-201ENST00000418518 PRSS23O95084 383 aa8.72□□□□□ -1.01
LINCMD1-201ENST00000418518 SCELO95171 688 aa8.72□□□□□ -1.01
LINCMD1-201ENST00000418518 KLF8O95600 359 aaPredicted RBP8.72□□□□□ -1.01
LINCMD1-201ENST00000418518 FUCA1P04066 466 aa8.72□□□□□ -1.01
LINCMD1-201ENST00000418518 CEACAM5P06731 702 aa8.72□□□□□ -1.01
LINCMD1-201ENST00000418518 RETP07949 1114 aa8.72□□□□□ -1.01
LINCMD1-201ENST00000418518 ANXA6P08133 673 aa8.72□□□□□ -1.01
LINCMD1-201ENST00000418518 ZCCHC18P0CG32 403 aa8.72□□□□□ -1.01
LINCMD1-201ENST00000418518 MTHFD1P11586 935 aaKnown RBP8.72□□□□□ -1.01
LINCMD1-201ENST00000418518 HOXB2P14652 356 aa8.72□□□□□ -1.01
LINCMD1-201ENST00000418518 FASP25445 335 aa8.72□□□□□ -1.01
LINCMD1-201ENST00000418518 CCT8P50990 548 aa8.72□□□□□ -1.01
LINCMD1-201ENST00000418518 CLCNKAP51800 687 aa8.72□□□□□ -1.01
LINCMD1-201ENST00000418518 RPS13P62277 151 aaKnown RBP8.72□□□□□ -1.01
LINCMD1-201ENST00000418518 PHEXP78562 749 aa8.72□□□□□ -1.01
LINCMD1-201ENST00000418518 REEP5Q00765 189 aa8.72□□□□□ -1.01
LINCMD1-201ENST00000418518 FOLH1Q04609 750 aa8.72□□□□□ -1.01
LINCMD1-201ENST00000418518 ABHD18Q0P651 414 aa8.72□□□□□ -1.01
LINCMD1-201ENST00000418518 LRRC74AQ0VAA2 488 aa8.72□□□□□ -1.01
LINCMD1-201ENST00000418518 SFSWAPQ12872 951 aaKnown RBP8.72□□□□□ -1.01
LINCMD1-201ENST00000418518 MED21Q13503 144 aa8.72□□□□□ -1.01
LINCMD1-201ENST00000418518 PDE7AQ13946 482 aa8.72□□□□□ -1.01
LINCMD1-201ENST00000418518 MAP7Q14244 749 aa8.72□□□□□ -1.01
LINCMD1-201ENST00000418518 PON2Q15165 354 aa8.72□□□□□ -1.01
LINCMD1-201ENST00000418518 ATP6AP1Q15904 470 aa8.72□□□□□ -1.01
LINCMD1-201ENST00000418518 HIST2H2ACQ16777 129 aaPredicted RBP8.72□□□□□ -1.01
LINCMD1-201ENST00000418518 DUOXA1Q1HG43 343 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms