RNA–Protein interactions for RNA: ENST00000418336.6

PKNOX1-202, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-202ENST00000418336 PRAMEF13Q5VWM6 474 aa19.67■□□□□ 0.74
PKNOX1-202ENST00000418336 C8orf74Q6P047 294 aa19.67■□□□□ 0.74
PKNOX1-202ENST00000418336 LCTLQ6UWM7 567 aa19.67■□□□□ 0.74
PKNOX1-202ENST00000418336 OVCH1Q7RTY7 1134 aa19.67■□□□□ 0.74
PKNOX1-202ENST00000418336 PALM2Q8IXS6 379 aa19.67■□□□□ 0.74
PKNOX1-202ENST00000418336 FBXL8Q96CD0 374 aa19.67■□□□□ 0.74
PKNOX1-202ENST00000418336 PRAP1Q96NZ9 151 aa19.67■□□□□ 0.74
PKNOX1-202ENST00000418336 RBBP8Q99708 897 aa19.67■□□□□ 0.74
PKNOX1-202ENST00000418336 TXLNGQ9NUQ3 528 aa19.67■□□□□ 0.74
PKNOX1-202ENST00000418336 IFT80Q9P2H3 777 aaPredicted RBP19.67■□□□□ 0.74
PKNOX1-202ENST00000418336 TLK1Q9UKI8 766 aa19.67■□□□□ 0.74
PKNOX1-202ENST00000418336 RUVBL1Q9Y265 456 aaKnown RBP19.67■□□□□ 0.74
PKNOX1-202ENST00000418336 KCNE1BA0A087WTH5 132 aa19.66■□□□□ 0.74
PKNOX1-202ENST00000418336 VSTM2BA6NLU5 285 aa19.66■□□□□ 0.74
PKNOX1-202ENST00000418336 C9J4A7 227 aa19.66■□□□□ 0.74
PKNOX1-202ENST00000418336 FOXS1O43638 330 aa19.66■□□□□ 0.74
PKNOX1-202ENST00000418336 FAM155BO75949 473 aa19.66■□□□□ 0.74
PKNOX1-202ENST00000418336 ALBP02768 609 aa19.66■□□□□ 0.74
PKNOX1-202ENST00000418336 ENO2P09104 434 aaPredicted RBP19.66■□□□□ 0.74
PKNOX1-202ENST00000418336 NR1D1P20393 614 aa19.66■□□□□ 0.74
PKNOX1-202ENST00000418336 ALAS2P22557 587 aa19.66■□□□□ 0.74
PKNOX1-202ENST00000418336 AP1S2P56377 157 aa19.66■□□□□ 0.74
PKNOX1-202ENST00000418336 NAE1Q13564 534 aa19.66■□□□□ 0.74
PKNOX1-202ENST00000418336 ATP1A4Q13733 1029 aa19.66■□□□□ 0.74
PKNOX1-202ENST00000418336 SSPNQ14714 243 aa19.66■□□□□ 0.74
PKNOX1-202ENST00000418336 NKG7Q16617 165 aa19.66■□□□□ 0.74
PKNOX1-202ENST00000418336 KBTBD12Q3ZCT8 623 aa19.66■□□□□ 0.74
PKNOX1-202ENST00000418336 MLIPQ5VWP3 458 aa19.66■□□□□ 0.74
PKNOX1-202ENST00000418336 PPP1R32Q7Z5V6 425 aa19.66■□□□□ 0.74
PKNOX1-202ENST00000418336 SHISA5Q8N114 240 aa19.66■□□□□ 0.74
PKNOX1-202ENST00000418336 TTC29Q8NA56 475 aaPredicted RBP19.66■□□□□ 0.74
PKNOX1-202ENST00000418336 CPNE1Q99829 537 aa19.66■□□□□ 0.74
PKNOX1-202ENST00000418336 C17orf62Q9BQA9 187 aa19.66■□□□□ 0.74
PKNOX1-202ENST00000418336 TMEM184CQ9NVA4 438 aa19.66■□□□□ 0.74
PKNOX1-202ENST00000418336 IRAK4Q9NWZ3 460 aa19.66■□□□□ 0.74
PKNOX1-202ENST00000418336 CTSFQ9UBX1 484 aa19.66■□□□□ 0.74
PKNOX1-202ENST00000418336 NUP210LQ5VU65 1888 aa19.65■□□□□ 0.74
PKNOX1-202ENST00000418336 NPEPPSL1A6NEC2 478 aa19.65■□□□□ 0.74
PKNOX1-202ENST00000418336 ARGFXA6NJG6 315 aa19.65■□□□□ 0.74
PKNOX1-202ENST00000418336 RFPL1O75677 317 aa19.65■□□□□ 0.74
PKNOX1-202ENST00000418336 GP5P40197 560 aa19.65■□□□□ 0.74
PKNOX1-202ENST00000418336 OR1D4P47884 311 aa19.65■□□□□ 0.74
PKNOX1-202ENST00000418336 POU4F1Q01851 419 aa19.65■□□□□ 0.74
PKNOX1-202ENST00000418336 EFTUD2Q15029 972 aaKnown RBP eCLIP19.65■□□□□ 0.74
PKNOX1-202ENST00000418336 MRGPREQ86SM8 312 aa19.65■□□□□ 0.74
PKNOX1-202ENST00000418336 NKAPQ8N5F7 415 aaKnown RBP19.65■□□□□ 0.74
PKNOX1-202ENST00000418336 METTL27Q8N6F8 245 aaPredicted RBP19.65■□□□□ 0.74
PKNOX1-202ENST00000418336 CSNK1A1LQ8N752 337 aa19.65■□□□□ 0.74
PKNOX1-202ENST00000418336 ABHD11Q8NFV4 315 aa19.65■□□□□ 0.74
PKNOX1-202ENST00000418336 OR4K1Q8NGD4 311 aa19.65■□□□□ 0.74
PKNOX1-202ENST00000418336 C9orf43Q8TAL5 461 aaPredicted RBP19.65■□□□□ 0.74
PKNOX1-202ENST00000418336 FBF1Q8TES7 1133 aa19.65■□□□□ 0.74
PKNOX1-202ENST00000418336 PYCR2Q96C36 320 aa19.65■□□□□ 0.74
PKNOX1-202ENST00000418336 TM4SF19Q96DZ7 209 aa19.65■□□□□ 0.74
PKNOX1-202ENST00000418336 SARGQ9BW04 601 aa19.65■□□□□ 0.74
PKNOX1-202ENST00000418336 WDR54Q9H977 334 aa19.65■□□□□ 0.74
PKNOX1-202ENST00000418336 ABCF3Q9NUQ8 709 aa19.65■□□□□ 0.74
PKNOX1-202ENST00000418336 TP53TG5Q9Y2B4 290 aa19.65■□□□□ 0.74
PKNOX1-202ENST00000418336 MRPS2Q9Y399 296 aaKnown RBP19.65■□□□□ 0.74
PKNOX1-202ENST00000418336 PTRH2Q9Y3E5 179 aaKnown RBP19.65■□□□□ 0.74
PKNOX1-202ENST00000418336 IGLV3-12A0A075B6K2 115 aa19.64■□□□□ 0.73
PKNOX1-202ENST00000418336 HMX2A2RU54 273 aa19.64■□□□□ 0.73
PKNOX1-202ENST00000418336 SUV39H1O43463 412 aa19.64■□□□□ 0.73
PKNOX1-202ENST00000418336 LCMT2O60294 686 aaKnown RBP19.64■□□□□ 0.73
PKNOX1-202ENST00000418336 SAT1P21673 171 aa19.64■□□□□ 0.73
PKNOX1-202ENST00000418336 HRH2P25021 359 aa19.64■□□□□ 0.73
PKNOX1-202ENST00000418336 GMPRP36959 345 aa19.64■□□□□ 0.73
PKNOX1-202ENST00000418336 CDKL1Q00532 357 aa19.64■□□□□ 0.73
PKNOX1-202ENST00000418336 FAM214AQ32MH5 1076 aa19.64■□□□□ 0.73
PKNOX1-202ENST00000418336 TCTN3Q6NUS6 607 aa19.64■□□□□ 0.73
PKNOX1-202ENST00000418336 RELL1Q8IUW5 271 aa19.64■□□□□ 0.73
PKNOX1-202ENST00000418336 KLHDC8AQ8IYD2 350 aa19.64■□□□□ 0.73
PKNOX1-202ENST00000418336 AMER3Q8N944 861 aa19.64■□□□□ 0.73
PKNOX1-202ENST00000418336 ZNF592Q92610 1267 aa19.64■□□□□ 0.73
PKNOX1-202ENST00000418336 UBXN10Q96LJ8 280 aa19.64■□□□□ 0.73
PKNOX1-202ENST00000418336 MESP1Q9BRJ9 268 aa19.64■□□□□ 0.73
PKNOX1-202ENST00000418336 PCBD2Q9H0N5 130 aa19.64■□□□□ 0.73
PKNOX1-202ENST00000418336 ING2Q9H160 280 aa19.64■□□□□ 0.73
PKNOX1-202ENST00000418336 SPNS1Q9H2V7 528 aa19.64■□□□□ 0.73
PKNOX1-202ENST00000418336 ZNF71Q9NQZ8 489 aaPredicted RBP19.64■□□□□ 0.73
PKNOX1-202ENST00000418336 ARL15Q9NXU5 204 aa19.64■□□□□ 0.73
PKNOX1-202ENST00000418336 OARD1Q9Y530 152 aa19.64■□□□□ 0.73
PKNOX1-202ENST00000418336 MAU2Q9Y6X3 613 aa19.64■□□□□ 0.73
PKNOX1-202ENST00000418336 TNRC6AQ8NDV7 1962 aaKnown RBP19.63■□□□□ 0.73
PKNOX1-202ENST00000418336 GUCA1CO95843 209 aa19.63■□□□□ 0.73
PKNOX1-202ENST00000418336 TUBB4AP04350 444 aa19.63■□□□□ 0.73
PKNOX1-202ENST00000418336 EIF2S1P05198 315 aaKnown RBP19.63■□□□□ 0.73
PKNOX1-202ENST00000418336 CCND1P24385 295 aa19.63■□□□□ 0.73
PKNOX1-202ENST00000418336 BCL6P41182 706 aa19.63■□□□□ 0.73
PKNOX1-202ENST00000418336 FOLR3P41439 243 aa19.63■□□□□ 0.73
PKNOX1-202ENST00000418336 EFNA3P52797 238 aa19.63■□□□□ 0.73
PKNOX1-202ENST00000418336 TSNQ15631 228 aaKnown RBP19.63■□□□□ 0.73
PKNOX1-202ENST00000418336 THEMIS2Q5TEJ8 643 aa19.63■□□□□ 0.73
PKNOX1-202ENST00000418336 CCDC25Q86WR0 208 aa19.63■□□□□ 0.73
PKNOX1-202ENST00000418336 SPATA6LQ8N4H0 392 aa19.63■□□□□ 0.73
PKNOX1-202ENST00000418336 PTERQ96BW5 349 aa19.63■□□□□ 0.73
PKNOX1-202ENST00000418336 FUT8Q9BYC5 575 aa19.63■□□□□ 0.73
PKNOX1-202ENST00000418336 DERL2Q9GZP9 239 aa19.63■□□□□ 0.73
PKNOX1-202ENST00000418336 GPAMQ9HCL2 828 aa19.63■□□□□ 0.73
PKNOX1-202ENST00000418336 UTP6Q9NYH9 597 aaKnown RBP19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms