RNA–Protein interactions for RNA: ENST00000416571.5

MDC1-202, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-202ENST00000416571 GARNL3Q5VVW2 1013 aa9.51□□□□□ -0.89
MDC1-202ENST00000416571 FBXO42Q6P3S6 717 aa9.51□□□□□ -0.89
MDC1-202ENST00000416571 LRRC8BQ6P9F7 803 aa9.51□□□□□ -0.89
MDC1-202ENST00000416571 ZNF534Q76KX8 674 aa9.51□□□□□ -0.89
MDC1-202ENST00000416571 CCDC170Q8IYT3 715 aa9.51□□□□□ -0.89
MDC1-202ENST00000416571 ZNF295-AS1Q8N0V1 137 aa9.51□□□□□ -0.89
MDC1-202ENST00000416571 OTUD6BQ8N6M0 293 aa9.51□□□□□ -0.89
MDC1-202ENST00000416571 UBL4BQ8N7F7 174 aa9.51□□□□□ -0.89
MDC1-202ENST00000416571 AMER3Q8N944 861 aa9.51□□□□□ -0.89
MDC1-202ENST00000416571 FAM98AQ8NCA5 519 aaKnown RBP9.51□□□□□ -0.89
MDC1-202ENST00000416571 PPHLN1Q8NEY8 458 aaKnown RBP9.51□□□□□ -0.89
MDC1-202ENST00000416571 THAP3Q8WTV1 239 aaPredicted RBP9.51□□□□□ -0.89
MDC1-202ENST00000416571 PEX13Q92968 403 aa9.51□□□□□ -0.89
MDC1-202ENST00000416571 C14orf79Q96F83 325 aa9.51□□□□□ -0.89
MDC1-202ENST00000416571 ZNF354BQ96LW1 612 aa9.51□□□□□ -0.89
MDC1-202ENST00000416571 ZNF778Q96MU6 729 aa9.51□□□□□ -0.89
MDC1-202ENST00000416571 GPR137Q96N19 417 aa9.51□□□□□ -0.89
MDC1-202ENST00000416571 TGIF2Q9GZN2 237 aa9.51□□□□□ -0.89
MDC1-202ENST00000416571 DRC3Q9H069 523 aa9.51□□□□□ -0.89
MDC1-202ENST00000416571 TSR3Q9UJK0 312 aaKnown RBP9.51□□□□□ -0.89
MDC1-202ENST00000416571 MED13LQ71F56 2210 aa9.51□□□□□ -0.89
MDC1-202ENST00000416571 NCOA6Q14686 2063 aaPredicted RBP9.51□□□□□ -0.89
MDC1-202ENST00000416571 CACNA1CQ13936 2221 aa9.5□□□□□ -0.89
MDC1-202ENST00000416571 A0A0A6YYC8 382 aaPredicted RBP9.5□□□□□ -0.89
MDC1-202ENST00000416571 A0A1W2PPV9 198 aa9.5□□□□□ -0.89
MDC1-202ENST00000416571 KRT87PA6NCN2 255 aa9.5□□□□□ -0.89
MDC1-202ENST00000416571 C19orf84I3L1E1 186 aa9.5□□□□□ -0.89
MDC1-202ENST00000416571 I3L1I5 382 aaPredicted RBP9.5□□□□□ -0.89
MDC1-202ENST00000416571 CD3EAPO15446 510 aaKnown RBP9.5□□□□□ -0.89
MDC1-202ENST00000416571 NDUFS3O75489 264 aa9.5□□□□□ -0.89
MDC1-202ENST00000416571 SEC24DO94855 1032 aaPredicted RBP9.5□□□□□ -0.89
MDC1-202ENST00000416571 CCNDBP1O95273 360 aa9.5□□□□□ -0.89
MDC1-202ENST00000416571 CD46P15529 392 aa9.5□□□□□ -0.89
MDC1-202ENST00000416571 FDFT1P37268 417 aa9.5□□□□□ -0.89
MDC1-202ENST00000416571 SLC26A3P40879 764 aa9.5□□□□□ -0.89
MDC1-202ENST00000416571 EIF3BP55884 814 aaKnown RBP9.5□□□□□ -0.89
MDC1-202ENST00000416571 TLE4Q04727 773 aa9.5□□□□□ -0.89
MDC1-202ENST00000416571 ACVR1Q04771 509 aa9.5□□□□□ -0.89
MDC1-202ENST00000416571 FASTKQ14296 549 aaKnown RBP9.5□□□□□ -0.89
MDC1-202ENST00000416571 NDUFA9Q16795 377 aa9.5□□□□□ -0.89
MDC1-202ENST00000416571 SYT16Q17RD7 645 aa9.5□□□□□ -0.89
MDC1-202ENST00000416571 MINDY4Q4G0A6 757 aa9.5□□□□□ -0.89
MDC1-202ENST00000416571 ANKRD20A4Q4UJ75 823 aa9.5□□□□□ -0.89
MDC1-202ENST00000416571 TMEM205Q6UW68 189 aa9.5□□□□□ -0.89
MDC1-202ENST00000416571 SUSD1Q6UWL2 747 aa9.5□□□□□ -0.89
MDC1-202ENST00000416571 SPNS3Q6ZMD2 512 aa9.5□□□□□ -0.89
MDC1-202ENST00000416571 ADCK2Q7Z695 626 aa9.5□□□□□ -0.89
MDC1-202ENST00000416571 LRRC6Q86X45 466 aa9.5□□□□□ -0.89
MDC1-202ENST00000416571 SPPL2CQ8IUH8 684 aa9.5□□□□□ -0.89
MDC1-202ENST00000416571 ZC3H7AQ8IWR0 971 aaKnown RBP9.5□□□□□ -0.89
MDC1-202ENST00000416571 EID3Q8N140 333 aa9.5□□□□□ -0.89
MDC1-202ENST00000416571 BEST3Q8N1M1 668 aa9.5□□□□□ -0.89
MDC1-202ENST00000416571 TMEM178AQ8NBL3 297 aa9.5□□□□□ -0.89
MDC1-202ENST00000416571 MCOLN3Q8TDD5 553 aa9.5□□□□□ -0.89
MDC1-202ENST00000416571 SMPDL3AQ92484 453 aa9.5□□□□□ -0.89
MDC1-202ENST00000416571 ALG3Q92685 438 aa9.5□□□□□ -0.89
MDC1-202ENST00000416571 IMMP1LQ96LU5 166 aa9.5□□□□□ -0.89
MDC1-202ENST00000416571 PLCD4Q9BRC7 762 aa9.5□□□□□ -0.89
MDC1-202ENST00000416571 UTP23Q9BRU9 249 aaKnown RBP9.5□□□□□ -0.89
MDC1-202ENST00000416571 TSPAN10Q9H1Z9 355 aaPredicted RBP9.5□□□□□ -0.89
MDC1-202ENST00000416571 KCNK13Q9HB14 408 aa9.5□□□□□ -0.89
MDC1-202ENST00000416571 ETNK1Q9HBU6 452 aa9.5□□□□□ -0.89
MDC1-202ENST00000416571 KLHL1Q9NR64 748 aa9.5□□□□□ -0.89
MDC1-202ENST00000416571 PCYOX1Q9UHG3 505 aa9.5□□□□□ -0.89
MDC1-202ENST00000416571 AMFRQ9UKV5 643 aa9.5□□□□□ -0.89
MDC1-202ENST00000416571 MEMO1Q9Y316 297 aa9.5□□□□□ -0.89
MDC1-202ENST00000416571 TCAF1Q9Y4C2 921 aa9.5□□□□□ -0.89
MDC1-202ENST00000416571 PCDHGB6Q9Y5F9 930 aa9.5□□□□□ -0.89
MDC1-202ENST00000416571 IGHV3-20A0A0C4DH32 117 aa9.49□□□□□ -0.89
MDC1-202ENST00000416571 ZNF839A8K0R7 811 aa9.49□□□□□ -0.89
MDC1-202ENST00000416571 NPIPA5E9PKD4 350 aa9.49□□□□□ -0.89
MDC1-202ENST00000416571 FANCGO15287 622 aa9.49□□□□□ -0.89
MDC1-202ENST00000416571 IFNB1P01574 187 aa9.49□□□□□ -0.89
MDC1-202ENST00000416571 EZRP15311 586 aaKnown RBP9.49□□□□□ -0.89
MDC1-202ENST00000416571 RPS3P23396 243 aaKnown RBP eCLIP9.49□□□□□ -0.89
MDC1-202ENST00000416571 STIP1P31948 543 aaKnown RBP9.49□□□□□ -0.89
MDC1-202ENST00000416571 KRTAP10-9P60411 292 aa9.49□□□□□ -0.89
MDC1-202ENST00000416571 YBX1P67809 324 aaKnown RBP9.49□□□□□ -0.89
MDC1-202ENST00000416571 MAT1AQ00266 395 aaKnown RBP9.49□□□□□ -0.89
MDC1-202ENST00000416571 ACER2Q5QJU3 275 aa9.49□□□□□ -0.89
MDC1-202ENST00000416571 FCRLBQ6BAA4 426 aa9.49□□□□□ -0.89
MDC1-202ENST00000416571 PLAG1Q6DJT9 500 aa9.49□□□□□ -0.89
MDC1-202ENST00000416571 Q6ZPB1 254 aaPredicted RBP9.49□□□□□ -0.89
MDC1-202ENST00000416571 PEX26Q7Z412 305 aa9.49□□□□□ -0.89
MDC1-202ENST00000416571 CPEB2Q7Z5Q1 589 aaKnown RBP9.49□□□□□ -0.89
MDC1-202ENST00000416571 PAQR7Q86WK9 346 aa9.49□□□□□ -0.89
MDC1-202ENST00000416571 MPP5Q8N3R9 675 aa9.49□□□□□ -0.89
MDC1-202ENST00000416571 HORMAD2Q8N7B1 307 aa9.49□□□□□ -0.89
MDC1-202ENST00000416571 OR9A1PQ8NGU1 263 aa9.49□□□□□ -0.89
MDC1-202ENST00000416571 SLC35B2Q8TB61 432 aa9.49□□□□□ -0.89
MDC1-202ENST00000416571 ADAMTS18Q8TE60 1221 aa9.49□□□□□ -0.89
MDC1-202ENST00000416571 CA5BP1Q8WTZ4 195 aa9.49□□□□□ -0.89
MDC1-202ENST00000416571 SPOCK3Q9BQ16 436 aa9.49□□□□□ -0.89
MDC1-202ENST00000416571 MCCC2Q9HCC0 563 aa9.49□□□□□ -0.89
MDC1-202ENST00000416571 FAM114A2Q9NRY5 505 aa9.49□□□□□ -0.89
MDC1-202ENST00000416571 ABCF3Q9NUQ8 709 aa9.49□□□□□ -0.89
MDC1-202ENST00000416571 ANKRD10Q9NXR5 420 aa9.49□□□□□ -0.89
MDC1-202ENST00000416571 COQ3Q9NZJ6 369 aa9.49□□□□□ -0.89
MDC1-202ENST00000416571 MARCH4Q9P2E8 410 aaPredicted RBP9.49□□□□□ -0.89
MDC1-202ENST00000416571 TAC3Q9UHF0 121 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms