RNA–Protein interactions for RNA: ENST00000415691.2

HNF4A-204, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

TSL 1 (best) BASIC

Gene HNF4A, Length 2,302 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-204ENST00000415691 CCNJQ5T5M9 372 aa12.86□□□□□ -0.35
HNF4A-204ENST00000415691 CLEC6AQ6EIG7 209 aa12.86□□□□□ -0.35
HNF4A-204ENST00000415691 SULT1C3Q6IMI6 304 aa12.86□□□□□ -0.35
HNF4A-204ENST00000415691 PKN3Q6P5Z2 889 aa12.86□□□□□ -0.35
HNF4A-204ENST00000415691 Q6ZVU0 165 aa12.86□□□□□ -0.35
HNF4A-204ENST00000415691 GDPD3Q7L5L3 318 aa12.86□□□□□ -0.35
HNF4A-204ENST00000415691 IFNEQ86WN2 208 aa12.86□□□□□ -0.35
HNF4A-204ENST00000415691 C2CD4AQ8NCU7 369 aaPredicted RBP12.86□□□□□ -0.35
HNF4A-204ENST00000415691 MCOLN3Q8TDD5 553 aa12.86□□□□□ -0.35
HNF4A-204ENST00000415691 FIG4Q92562 907 aa12.86□□□□□ -0.35
HNF4A-204ENST00000415691 ZHX1-C8orf76Q96EF9 292 aa12.86□□□□□ -0.35
HNF4A-204ENST00000415691 IMP4Q96G21 291 aaKnown RBP12.86□□□□□ -0.35
HNF4A-204ENST00000415691 POLR1EQ9GZS1 481 aaKnown RBP12.86□□□□□ -0.35
HNF4A-204ENST00000415691 CCDC90BQ9GZT6 254 aa12.86□□□□□ -0.35
HNF4A-204ENST00000415691 SLC25A51Q9H1U9 297 aa12.86□□□□□ -0.35
HNF4A-204ENST00000415691 C12orf10Q9HB07 376 aa12.86□□□□□ -0.35
HNF4A-204ENST00000415691 CYP4F12Q9HCS2 524 aa12.86□□□□□ -0.35
HNF4A-204ENST00000415691 CCNB1IP1Q9NPC3 277 aa12.86□□□□□ -0.35
HNF4A-204ENST00000415691 STMN3Q9NZ72 180 aa12.86□□□□□ -0.35
HNF4A-204ENST00000415691 EVLQ9UI08 416 aaPredicted RBP12.86□□□□□ -0.35
HNF4A-204ENST00000415691 LEF1Q9UJU2 399 aaPredicted RBP12.86□□□□□ -0.35
HNF4A-204ENST00000415691 MKLN1Q9UL63 735 aa12.86□□□□□ -0.35
HNF4A-204ENST00000415691 COL4A2P08572 1712 aa12.86□□□□□ -0.35
HNF4A-204ENST00000415691 ZFC3H1O60293 1989 aaKnown RBP12.85□□□□□ -0.35
HNF4A-204ENST00000415691 PTGES3LE9PB15 166 aa12.85□□□□□ -0.35
HNF4A-204ENST00000415691 MT-ND1P03886 318 aa12.85□□□□□ -0.35
HNF4A-204ENST00000415691 ITGAMP11215 1152 aa12.85□□□□□ -0.35
HNF4A-204ENST00000415691 CR2P20023 1033 aa12.85□□□□□ -0.35
HNF4A-204ENST00000415691 CHRM3P20309 590 aa12.85□□□□□ -0.35
HNF4A-204ENST00000415691 PRKACBP22694 351 aa12.85□□□□□ -0.35
HNF4A-204ENST00000415691 TIE1P35590 1138 aa12.85□□□□□ -0.35
HNF4A-204ENST00000415691 SLC26A3P40879 764 aa12.85□□□□□ -0.35
HNF4A-204ENST00000415691 ETV6P41212 452 aa12.85□□□□□ -0.35
HNF4A-204ENST00000415691 SEPHS1P49903 392 aa12.85□□□□□ -0.35
HNF4A-204ENST00000415691 SLC35A2P78381 396 aa12.85□□□□□ -0.35
HNF4A-204ENST00000415691 TRAF3Q13114 568 aa12.85□□□□□ -0.35
HNF4A-204ENST00000415691 TYSND1Q2T9J0 566 aa12.85□□□□□ -0.35
HNF4A-204ENST00000415691 FNDC3BQ53EP0 1204 aaKnown RBP12.85□□□□□ -0.35
HNF4A-204ENST00000415691 C2orf27AQ580R0 203 aa12.85□□□□□ -0.35
HNF4A-204ENST00000415691 ZNF678Q5SXM1 525 aa12.85□□□□□ -0.35
HNF4A-204ENST00000415691 GLYATQ6IB77 296 aa12.85□□□□□ -0.35
HNF4A-204ENST00000415691 C22orf39Q6P5X5 142 aa12.85□□□□□ -0.35
HNF4A-204ENST00000415691 GALNT12Q8IXK2 581 aa12.85□□□□□ -0.35
HNF4A-204ENST00000415691 SPATA6LQ8N4H0 392 aa12.85□□□□□ -0.35
HNF4A-204ENST00000415691 CHST14Q8NCH0 376 aa12.85□□□□□ -0.35
HNF4A-204ENST00000415691 SETD9Q8NE22 299 aa12.85□□□□□ -0.35
HNF4A-204ENST00000415691 DNAJB14Q8TBM8 379 aa12.85□□□□□ -0.35
HNF4A-204ENST00000415691 FAM3CQ92520 227 aa12.85□□□□□ -0.35
HNF4A-204ENST00000415691 VOPP1Q96AW1 172 aa12.85□□□□□ -0.35
HNF4A-204ENST00000415691 APOL2Q9BQE5 337 aa12.85□□□□□ -0.35
HNF4A-204ENST00000415691 TMEM246Q9BRR3 403 aa12.85□□□□□ -0.35
HNF4A-204ENST00000415691 UGT2B28Q9BY64 529 aa12.85□□□□□ -0.35
HNF4A-204ENST00000415691 DNAJC15Q9Y5T4 150 aa12.85□□□□□ -0.35
HNF4A-204ENST00000415691 B8ZZF3 427 aa12.85□□□□□ -0.35
HNF4A-204ENST00000415691 SRPRAP08240 638 aaKnown RBP12.85□□□□□ -0.35
HNF4A-204ENST00000415691 HOXB6P17509 224 aaKnown RBP12.85□□□□□ -0.35
HNF4A-204ENST00000415691 IL12RB1P42701 662 aa12.85□□□□□ -0.35
HNF4A-204ENST00000415691 KIR2DL1P43626 348 aaPredicted RBP12.85□□□□□ -0.35
HNF4A-204ENST00000415691 PRIM2P49643 509 aa12.85□□□□□ -0.35
HNF4A-204ENST00000415691 KCNK10P57789 538 aa12.85□□□□□ -0.35
HNF4A-204ENST00000415691 OR2B6P58173 313 aa12.85□□□□□ -0.35
HNF4A-204ENST00000415691 POU6F1Q14863 301 aa12.85□□□□□ -0.35
HNF4A-204ENST00000415691 EIF4HQ15056 248 aaKnown RBP12.85□□□□□ -0.35
HNF4A-204ENST00000415691 PCSK7Q16549 785 aa12.85□□□□□ -0.35
HNF4A-204ENST00000415691 DPY19L3Q6ZPD9 716 aa12.85□□□□□ -0.35
HNF4A-204ENST00000415691 VN1R5Q7Z5H4 357 aa12.85□□□□□ -0.35
HNF4A-204ENST00000415691 SPATA19Q7Z5L4 167 aa12.85□□□□□ -0.35
HNF4A-204ENST00000415691 SIX5Q8N196 739 aa12.85□□□□□ -0.35
HNF4A-204ENST00000415691 RYBPQ8N488 228 aaPredicted RBP12.85□□□□□ -0.35
HNF4A-204ENST00000415691 ISG20Q96AZ6 181 aaKnown RBP12.85□□□□□ -0.35
HNF4A-204ENST00000415691 RUBCNLQ9H714 662 aa12.85□□□□□ -0.35
HNF4A-204ENST00000415691 NDRG2Q9UN36 371 aaKnown RBP12.85□□□□□ -0.35
HNF4A-204ENST00000415691 PCDHGC4Q9Y5F7 938 aa12.85□□□□□ -0.35
HNF4A-204ENST00000415691 GPR45Q9Y5Y3 372 aa12.85□□□□□ -0.35
HNF4A-204ENST00000415691 F5P12259 2224 aa12.85□□□□□ -0.35
HNF4A-204ENST00000415691 EFCAB9A8MZ26 197 aa12.84□□□□□ -0.35
HNF4A-204ENST00000415691 CCRL2O00421 344 aa12.84□□□□□ -0.35
HNF4A-204ENST00000415691 ANGPTL1O95841 491 aa12.84□□□□□ -0.35
HNF4A-204ENST00000415691 ANXA6P08133 673 aa12.84□□□□□ -0.35
HNF4A-204ENST00000415691 ALDH4A1P30038 563 aa12.84□□□□□ -0.35
HNF4A-204ENST00000415691 NNMTP40261 264 aa12.84□□□□□ -0.35
HNF4A-204ENST00000415691 TNFRSF4P43489 277 aa12.84□□□□□ -0.35
HNF4A-204ENST00000415691 ST8SIA6P61647 398 aa12.84□□□□□ -0.35
HNF4A-204ENST00000415691 LSM3P62310 102 aaKnown RBP12.84□□□□□ -0.35
HNF4A-204ENST00000415691 HSPA14Q0VDF9 509 aa12.84□□□□□ -0.35
HNF4A-204ENST00000415691 CSHL1Q14406 222 aa12.84□□□□□ -0.35
HNF4A-204ENST00000415691 RPS6KA2Q15349 733 aa12.84□□□□□ -0.35
HNF4A-204ENST00000415691 MLF2Q15773 248 aaPredicted RBP12.84□□□□□ -0.35
HNF4A-204ENST00000415691 NPTX1Q15818 432 aa12.84□□□□□ -0.35
HNF4A-204ENST00000415691 CDONQ4KMG0 1287 aa12.84□□□□□ -0.35
HNF4A-204ENST00000415691 YIF1BQ5BJH7 314 aa12.84□□□□□ -0.35
HNF4A-204ENST00000415691 CARD16Q5EG05 197 aa12.84□□□□□ -0.35
HNF4A-204ENST00000415691 COLEC12Q5KU26 742 aa12.84□□□□□ -0.35
HNF4A-204ENST00000415691 ALG1LQ6GMV1 187 aa12.84□□□□□ -0.35
HNF4A-204ENST00000415691 ADAMTSL2Q86TH1 951 aa12.84□□□□□ -0.35
HNF4A-204ENST00000415691 HORMAD1Q86X24 394 aa12.84□□□□□ -0.35
HNF4A-204ENST00000415691 GRAMD2AQ8IUY3 354 aa12.84□□□□□ -0.35
HNF4A-204ENST00000415691 DENND6AQ8IWF6 608 aa12.84□□□□□ -0.35
HNF4A-204ENST00000415691 CCDC28AQ8IWP9 274 aa12.84□□□□□ -0.35
HNF4A-204ENST00000415691 GJD3Q8N144 294 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms