RNA–Protein interactions for RNA: ENST00000415537.1

HLA-C-204, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 782 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-204ENST00000415537 IVDP26440 423 aa23.8■■□□□ 1.4
HLA-C-204ENST00000415537 PAFAH1B1P43034 410 aa23.8■■□□□ 1.4
HLA-C-204ENST00000415537 RELAQ04206 551 aa23.8■■□□□ 1.4
HLA-C-204ENST00000415537 KLC1Q07866 573 aa23.8■■□□□ 1.4
HLA-C-204ENST00000415537 HKDC1Q2TB90 917 aa23.8■■□□□ 1.4
HLA-C-204ENST00000415537 GARNL3Q5VVW2 1013 aa23.8■■□□□ 1.4
HLA-C-204ENST00000415537 KIRREL2Q6UWL6 708 aa23.8■■□□□ 1.4
HLA-C-204ENST00000415537 CREG2Q8IUH2 290 aa23.8■■□□□ 1.4
HLA-C-204ENST00000415537 CNTN4Q8IWV2 1026 aa23.8■■□□□ 1.4
HLA-C-204ENST00000415537 LRRC56Q8IYG6 542 aaPredicted RBP23.8■■□□□ 1.4
HLA-C-204ENST00000415537 PRSS58Q8IYP2 241 aa23.8■■□□□ 1.4
HLA-C-204ENST00000415537 FAM26EQ8N5C1 309 aa23.8■■□□□ 1.4
HLA-C-204ENST00000415537 CFAP36Q96G28 342 aa23.8■■□□□ 1.4
HLA-C-204ENST00000415537 NAPGQ99747 312 aaPredicted RBP23.8■■□□□ 1.4
HLA-C-204ENST00000415537 B3GNT3Q9Y2A9 372 aa23.8■■□□□ 1.4
HLA-C-204ENST00000415537 RELNP78509 3460 aa23.79■■□□□ 1.4
HLA-C-204ENST00000415537 PABPN1LA6NDY0 278 aaKnown RBP23.79■■□□□ 1.4
HLA-C-204ENST00000415537 H7BY64 318 aa23.79■■□□□ 1.4
HLA-C-204ENST00000415537 HAT1O14929 419 aa23.79■■□□□ 1.4
HLA-C-204ENST00000415537 ALOX12BO75342 701 aa23.79■■□□□ 1.4
HLA-C-204ENST00000415537 ANXA5P08758 320 aa23.79■■□□□ 1.4
HLA-C-204ENST00000415537 HRH2P25021 359 aa23.79■■□□□ 1.4
HLA-C-204ENST00000415537 ELK3P41970 407 aa23.79■■□□□ 1.4
HLA-C-204ENST00000415537 SP140Q13342 867 aa23.79■■□□□ 1.4
HLA-C-204ENST00000415537 HP1BP3Q5SSJ5 553 aaPredicted RBP23.79■■□□□ 1.4
HLA-C-204ENST00000415537 RBM20Q5T481 1227 aaKnown RBP23.79■■□□□ 1.4
HLA-C-204ENST00000415537 PAQR3Q6TCH7 311 aa23.79■■□□□ 1.4
HLA-C-204ENST00000415537 IGFL3Q6UXB1 125 aa23.79■■□□□ 1.4
HLA-C-204ENST00000415537 IGDCC3Q8IVU1 814 aa23.79■■□□□ 1.4
HLA-C-204ENST00000415537 Q8NA96 180 aa23.79■■□□□ 1.4
HLA-C-204ENST00000415537 MMABQ96EY8 250 aaPredicted RBP23.79■■□□□ 1.4
HLA-C-204ENST00000415537 PRAP1Q96NZ9 151 aa23.79■■□□□ 1.4
HLA-C-204ENST00000415537 PCBD2Q9H0N5 130 aa23.79■■□□□ 1.4
HLA-C-204ENST00000415537 PARVBQ9HBI1 364 aa23.79■■□□□ 1.4
HLA-C-204ENST00000415537 TMEM184CQ9NVA4 438 aa23.79■■□□□ 1.4
HLA-C-204ENST00000415537 CUEDC1Q9NWM3 386 aaPredicted RBP23.79■■□□□ 1.4
HLA-C-204ENST00000415537 C3orf18Q9UK00 162 aa23.79■■□□□ 1.4
HLA-C-204ENST00000415537 ADAMTS6Q9UKP5 1117 aa23.79■■□□□ 1.4
HLA-C-204ENST00000415537 CHMP2BQ9UQN3 213 aa23.79■■□□□ 1.4
HLA-C-204ENST00000415537 PDE10AQ9Y233 779 aa23.79■■□□□ 1.4
HLA-C-204ENST00000415537 DOCK10Q96BY6 2186 aa23.79■■□□□ 1.4
HLA-C-204ENST00000415537 HIST1H2AGP0C0S8 130 aaPredicted RBP23.78■■□□□ 1.4
HLA-C-204ENST00000415537 HIST1H2ADP20671 130 aa23.78■■□□□ 1.4
HLA-C-204ENST00000415537 GABRB3P28472 473 aa23.78■■□□□ 1.4
HLA-C-204ENST00000415537 CDKN2DP55273 166 aa23.78■■□□□ 1.4
HLA-C-204ENST00000415537 TBPL1P62380 186 aa23.78■■□□□ 1.4
HLA-C-204ENST00000415537 TIAL1Q01085 375 aaKnown RBP eCLIP23.78■■□□□ 1.4
HLA-C-204ENST00000415537 PDAP1Q13442 181 aaKnown RBP23.78■■□□□ 1.4
HLA-C-204ENST00000415537 NDUFA9Q16795 377 aa23.78■■□□□ 1.4
HLA-C-204ENST00000415537 PLEKHN1Q494U1 663 aaPredicted RBP23.78■■□□□ 1.4
HLA-C-204ENST00000415537 VWA2Q5GFL6 755 aa23.78■■□□□ 1.4
HLA-C-204ENST00000415537 GALNT7Q86SF2 657 aa23.78■■□□□ 1.4
HLA-C-204ENST00000415537 PARP9Q8IXQ6 854 aa23.78■■□□□ 1.4
HLA-C-204ENST00000415537 IQCKQ8N0W5 287 aa23.78■■□□□ 1.4
HLA-C-204ENST00000415537 OR11G2Q8NGC1 345 aa23.78■■□□□ 1.4
HLA-C-204ENST00000415537 LRRC39Q96DD0 335 aa23.78■■□□□ 1.4
HLA-C-204ENST00000415537 HIST1H2AHQ96KK5 128 aa23.78■■□□□ 1.4
HLA-C-204ENST00000415537 HIST1H2AJQ99878 128 aa23.78■■□□□ 1.4
HLA-C-204ENST00000415537 H2AFJQ9BTM1 129 aa23.78■■□□□ 1.4
HLA-C-204ENST00000415537 ILKAPQ9H0C8 392 aaPredicted RBP23.78■■□□□ 1.4
HLA-C-204ENST00000415537 TRPC4Q9UBN4 977 aa23.78■■□□□ 1.4
HLA-C-204ENST00000415537 CCDC188H7C350 402 aa23.77■■□□□ 1.4
HLA-C-204ENST00000415537 MAP2K7O14733 419 aa23.77■■□□□ 1.4
HLA-C-204ENST00000415537 SLC16A5O15375 505 aa23.77■■□□□ 1.4
HLA-C-204ENST00000415537 GNLYP22749 145 aa23.77■■□□□ 1.4
HLA-C-204ENST00000415537 UQCRFS1P47985 274 aa23.77■■□□□ 1.4
HLA-C-204ENST00000415537 ITGA8P53708 1063 aa23.77■■□□□ 1.4
HLA-C-204ENST00000415537 ARL4CP56559 192 aa23.77■■□□□ 1.4
HLA-C-204ENST00000415537 DSG2Q14126 1118 aa23.77■■□□□ 1.4
HLA-C-204ENST00000415537 HIF1AQ16665 826 aa23.77■■□□□ 1.4
HLA-C-204ENST00000415537 TEDDM1Q5T9Z0 273 aa23.77■■□□□ 1.4
HLA-C-204ENST00000415537 AGAP7PQ5VUJ5 663 aa23.77■■□□□ 1.4
HLA-C-204ENST00000415537 HIBCHQ6NVY1 386 aaPredicted RBP23.77■■□□□ 1.4
HLA-C-204ENST00000415537 PLD3Q8IV08 490 aa23.77■■□□□ 1.4
HLA-C-204ENST00000415537 GPATCH11Q8N954 259 aa23.77■■□□□ 1.4
HLA-C-204ENST00000415537 LINGO1Q96FE5 620 aa23.77■■□□□ 1.4
HLA-C-204ENST00000415537 PWWP2AQ96N64 755 aa23.77■■□□□ 1.4
HLA-C-204ENST00000415537 AGAP4Q96P64 663 aa23.77■■□□□ 1.4
HLA-C-204ENST00000415537 SLC29A3Q9BZD2 475 aa23.77■■□□□ 1.4
HLA-C-204ENST00000415537 DRC3Q9H069 523 aa23.77■■□□□ 1.4
HLA-C-204ENST00000415537 SYNPO2LQ9H987 977 aa23.77■■□□□ 1.4
HLA-C-204ENST00000415537 SHANK1Q9Y566 2161 aa23.76■■□□□ 1.39
HLA-C-204ENST00000415537 DOPEY2Q9Y3R5 2298 aa23.76■■□□□ 1.39
HLA-C-204ENST00000415537 IGLV3-12A0A075B6K2 115 aa23.76■■□□□ 1.39
HLA-C-204ENST00000415537 ACPPP15309 386 aa23.76■■□□□ 1.39
HLA-C-204ENST00000415537 CCND1P24385 295 aa23.76■■□□□ 1.39
HLA-C-204ENST00000415537 IL2P60568 153 aa23.76■■□□□ 1.39
HLA-C-204ENST00000415537 PRR30Q53SZ7 412 aaPredicted RBP23.76■■□□□ 1.39
HLA-C-204ENST00000415537 AGTRAPQ6RW13 159 aa23.76■■□□□ 1.39
HLA-C-204ENST00000415537 ALKBH8Q96BT7 664 aaKnown RBP23.76■■□□□ 1.39
HLA-C-204ENST00000415537 SNF8Q96H20 258 aa23.76■■□□□ 1.39
HLA-C-204ENST00000415537 TRIM51Q9BSJ1 452 aa23.76■■□□□ 1.39
HLA-C-204ENST00000415537 LHPPQ9H008 270 aa23.76■■□□□ 1.39
HLA-C-204ENST00000415537 ATG10Q9H0Y0 220 aa23.76■■□□□ 1.39
HLA-C-204ENST00000415537 C14orf105Q9NVL8 296 aa23.76■■□□□ 1.39
HLA-C-204ENST00000415537 CORO1CQ9ULV4 474 aaPredicted RBP23.76■■□□□ 1.39
HLA-C-204ENST00000415537 CLEC18AA5D8T8 446 aa23.75■■□□□ 1.39
HLA-C-204ENST00000415537 TTI1O43156 1089 aa23.75■■□□□ 1.39
HLA-C-204ENST00000415537 HPP00738 406 aa23.75■■□□□ 1.39
HLA-C-204ENST00000415537 CXCR2P25025 360 aa23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms