RNA–Protein interactions for RNA: ENST00000415298.5

AP1S3-205, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 1 (best)

Gene AP1S3, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-205ENST00000415298 HEXDCQ8WVB3 486 aa19.81■□□□□ 0.76
AP1S3-205ENST00000415298 KCTD13Q8WZ19 329 aa19.81■□□□□ 0.76
AP1S3-205ENST00000415298 C11orf84Q9BUA3 381 aaPredicted RBP19.81■□□□□ 0.76
AP1S3-205ENST00000415298 PAPOLGQ9BWT3 736 aaKnown RBP19.81■□□□□ 0.76
AP1S3-205ENST00000415298 KAT8Q9H7Z6 458 aaKnown RBP19.81■□□□□ 0.76
AP1S3-205ENST00000415298 TTLL8A6PVC2 850 aa19.8■□□□□ 0.76
AP1S3-205ENST00000415298 TNFRSF10BO14763 440 aa19.8■□□□□ 0.76
AP1S3-205ENST00000415298 SLC30A4O14863 429 aa19.8■□□□□ 0.76
AP1S3-205ENST00000415298 RFPL3O75679 317 aa19.8■□□□□ 0.76
AP1S3-205ENST00000415298 APEHP13798 732 aaKnown RBP19.8■□□□□ 0.76
AP1S3-205ENST00000415298 PTAFRP25105 342 aa19.8■□□□□ 0.76
AP1S3-205ENST00000415298 FADDQ13158 208 aa19.8■□□□□ 0.76
AP1S3-205ENST00000415298 RAB33AQ14088 237 aa19.8■□□□□ 0.76
AP1S3-205ENST00000415298 PCLAFQ15004 111 aa19.8■□□□□ 0.76
AP1S3-205ENST00000415298 GPR33Q49SQ1 333 aa19.8■□□□□ 0.76
AP1S3-205ENST00000415298 RAB41Q5JT25 222 aa19.8■□□□□ 0.76
AP1S3-205ENST00000415298 MANEALQ5VSG8 457 aa19.8■□□□□ 0.76
AP1S3-205ENST00000415298 SPOCD1Q6ZMY3 1216 aa19.8■□□□□ 0.76
AP1S3-205ENST00000415298 TRILQ7L0X0 811 aa19.8■□□□□ 0.76
AP1S3-205ENST00000415298 AMER2Q8N7J2 671 aa19.8■□□□□ 0.76
AP1S3-205ENST00000415298 GDPD1Q8N9F7 314 aa19.8■□□□□ 0.76
AP1S3-205ENST00000415298 SPPL2BQ8TCT7 592 aa19.8■□□□□ 0.76
AP1S3-205ENST00000415298 ELP4Q96EB1 424 aa19.8■□□□□ 0.76
AP1S3-205ENST00000415298 PGAP3Q96FM1 320 aaPredicted RBP19.8■□□□□ 0.76
AP1S3-205ENST00000415298 KLHL5Q96PQ7 755 aa19.8■□□□□ 0.76
AP1S3-205ENST00000415298 BBS4Q96RK4 519 aa19.8■□□□□ 0.76
AP1S3-205ENST00000415298 CCDC90BQ9GZT6 254 aa19.8■□□□□ 0.76
AP1S3-205ENST00000415298 PRO3102Q9H379 93 aa19.8■□□□□ 0.76
AP1S3-205ENST00000415298 ARNT2Q9HBZ2 717 aa19.8■□□□□ 0.76
AP1S3-205ENST00000415298 TRAPPC4Q9Y296 219 aa19.8■□□□□ 0.76
AP1S3-205ENST00000415298 TP53BP1Q12888 1972 aaPredicted RBP19.8■□□□□ 0.76
AP1S3-205ENST00000415298 LOC390937A0A1W2PQ73 354 aa19.8■□□□□ 0.76
AP1S3-205ENST00000415298 AQP12BA6NM10 295 aa19.8■□□□□ 0.76
AP1S3-205ENST00000415298 EFCAB9A8MZ26 197 aa19.8■□□□□ 0.76
AP1S3-205ENST00000415298 H3BNC9 293 aa19.8■□□□□ 0.76
AP1S3-205ENST00000415298 PER2O15055 1255 aa19.8■□□□□ 0.76
AP1S3-205ENST00000415298 TGM5O43548 720 aa19.8■□□□□ 0.76
AP1S3-205ENST00000415298 RB1P06400 928 aa19.8■□□□□ 0.76
AP1S3-205ENST00000415298 HAPLN1P10915 354 aaPredicted RBP19.8■□□□□ 0.76
AP1S3-205ENST00000415298 FNTBP49356 437 aa19.8■□□□□ 0.76
AP1S3-205ENST00000415298 SAMD4BQ5PRF9 694 aaKnown RBP19.8■□□□□ 0.76
AP1S3-205ENST00000415298 BMP8AQ7Z5Y6 402 aa19.8■□□□□ 0.76
AP1S3-205ENST00000415298 MIB1Q86YT6 1006 aa19.8■□□□□ 0.76
AP1S3-205ENST00000415298 TMC8Q8IU68 726 aa19.8■□□□□ 0.76
AP1S3-205ENST00000415298 AQP12AQ8IXF9 295 aa19.8■□□□□ 0.76
AP1S3-205ENST00000415298 KATNAL2Q8IYT4 538 aa19.8■□□□□ 0.76
AP1S3-205ENST00000415298 CHDHQ8NE62 594 aaPredicted RBP19.8■□□□□ 0.76
AP1S3-205ENST00000415298 FEZF2Q8TBJ5 459 aa19.8■□□□□ 0.76
AP1S3-205ENST00000415298 HDAC10Q969S8 669 aa19.8■□□□□ 0.76
AP1S3-205ENST00000415298 MS4A7Q9GZW8 240 aaPredicted RBP19.8■□□□□ 0.76
AP1S3-205ENST00000415298 MMP28Q9H239 520 aa19.8■□□□□ 0.76
AP1S3-205ENST00000415298 SPAG4Q9NPE6 437 aa19.8■□□□□ 0.76
AP1S3-205ENST00000415298 SARDHQ9UL12 918 aa19.8■□□□□ 0.76
AP1S3-205ENST00000415298 C2orf74A8MZ97 194 aa19.79■□□□□ 0.76
AP1S3-205ENST00000415298 SGK1O00141 431 aa19.79■□□□□ 0.76
AP1S3-205ENST00000415298 SIGLEC6O43699 453 aa19.79■□□□□ 0.76
AP1S3-205ENST00000415298 TPST1O60507 370 aa19.79■□□□□ 0.76
AP1S3-205ENST00000415298 IPO13O94829 963 aaKnown RBP19.79■□□□□ 0.76
AP1S3-205ENST00000415298 S100PP25815 95 aa19.79■□□□□ 0.76
AP1S3-205ENST00000415298 ATP5C1P36542 298 aaKnown RBP19.79■□□□□ 0.76
AP1S3-205ENST00000415298 SLC6A3Q01959 620 aa19.79■□□□□ 0.76
AP1S3-205ENST00000415298 OR8H2Q8N162 312 aa19.79■□□□□ 0.76
AP1S3-205ENST00000415298 GPR156Q8NFN8 814 aa19.79■□□□□ 0.76
AP1S3-205ENST00000415298 FBXO30Q8TB52 745 aa19.79■□□□□ 0.76
AP1S3-205ENST00000415298 PPP1R36Q96LQ0 422 aa19.79■□□□□ 0.76
AP1S3-205ENST00000415298 FRMD6Q96NE9 622 aa19.79■□□□□ 0.76
AP1S3-205ENST00000415298 LMAN2LQ9H0V9 348 aa19.79■□□□□ 0.76
AP1S3-205ENST00000415298 BIN3Q9NQY0 253 aa19.79■□□□□ 0.76
AP1S3-205ENST00000415298 AFF4Q9UHB7 1163 aaKnown RBP19.79■□□□□ 0.76
AP1S3-205ENST00000415298 PCDHB3Q9Y5E6 796 aa19.79■□□□□ 0.76
AP1S3-205ENST00000415298 KCNMB2Q9Y691 235 aa19.79■□□□□ 0.76
AP1S3-205ENST00000415298 TMEM238LA0A1B0GVL6 79 aa19.79■□□□□ 0.76
AP1S3-205ENST00000415298 TMEM191CA6NGB0 347 aa19.79■□□□□ 0.76
AP1S3-205ENST00000415298 YJEFN3A6XGL0 299 aa19.79■□□□□ 0.76
AP1S3-205ENST00000415298 SLCO1B7G3V0H7 640 aa19.79■□□□□ 0.76
AP1S3-205ENST00000415298 PMPCBO75439 489 aa19.79■□□□□ 0.76
AP1S3-205ENST00000415298 LCKP06239 509 aa19.79■□□□□ 0.76
AP1S3-205ENST00000415298 ITGAVP06756 1048 aa19.79■□□□□ 0.76
AP1S3-205ENST00000415298 ATP6V1B2P21281 511 aa19.79■□□□□ 0.76
AP1S3-205ENST00000415298 RAC1P63000 192 aa19.79■□□□□ 0.76
AP1S3-205ENST00000415298 ZNF252P-AS1Q0IIN9 211 aa19.79■□□□□ 0.76
AP1S3-205ENST00000415298 SWI5Q1ZZU3 235 aa19.79■□□□□ 0.76
AP1S3-205ENST00000415298 RAB6CQ53S08 254 aa19.79■□□□□ 0.76
AP1S3-205ENST00000415298 RBM23Q86U06 439 aaKnown RBP19.79■□□□□ 0.76
AP1S3-205ENST00000415298 C10orf107Q8IVU9 208 aa19.79■□□□□ 0.76
AP1S3-205ENST00000415298 CYP4Z2PQ8N1L4 340 aa19.79■□□□□ 0.76
AP1S3-205ENST00000415298 TTLL2Q9BWV7 592 aa19.79■□□□□ 0.76
AP1S3-205ENST00000415298 RAB6CQ9H0N0 254 aa19.79■□□□□ 0.76
AP1S3-205ENST00000415298 INTS10Q9NVR2 710 aaKnown RBP19.79■□□□□ 0.76
AP1S3-205ENST00000415298 EMCNQ9ULC0 261 aa19.79■□□□□ 0.76
AP1S3-205ENST00000415298 TMEM82A0PJX8 343 aa19.78■□□□□ 0.76
AP1S3-205ENST00000415298 KRBOX1C9JBD0 128 aa19.78■□□□□ 0.76
AP1S3-205ENST00000415298 WWP2O00308 870 aa19.78■□□□□ 0.76
AP1S3-205ENST00000415298 CNTN5O94779 1100 aa19.78■□□□□ 0.76
AP1S3-205ENST00000415298 C1QAP02745 245 aa19.78■□□□□ 0.76
AP1S3-205ENST00000415298 SMIM6P0DI80 62 aa19.78■□□□□ 0.76
AP1S3-205ENST00000415298 RPS3P23396 243 aaKnown RBP eCLIP19.78■□□□□ 0.76
AP1S3-205ENST00000415298 CLCNKAP51800 687 aa19.78■□□□□ 0.76
AP1S3-205ENST00000415298 ETFDHQ16134 617 aa19.78■□□□□ 0.76
AP1S3-205ENST00000415298 SYT6Q5T7P8 510 aaPredicted RBP19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms